RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
LINC00343-202ENST00000415294 HRCP23327 699 aa12.35□□□□□ -0.43
LINC00343-202ENST00000415294 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
LINC00343-202ENST00000415294 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
LINC00343-202ENST00000415294 CFHP08603 1231 aa12.34□□□□□ -0.43
LINC00343-202ENST00000415294 KMT5BQ4FZB7 885 aa12.34□□□□□ -0.43
LINC00343-202ENST00000415294 MTMR14Q8NCE2 650 aa12.34□□□□□ -0.43
LINC00343-202ENST00000415294 ZFRQ96KR1 1074 aaKnown RBP12.34□□□□□ -0.43
LINC00343-202ENST00000415294 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
LINC00343-202ENST00000415294 PLA2G2EQ9NZK7 142 aa12.34□□□□□ -0.43
LINC00343-202ENST00000415294 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
LINC00343-202ENST00000415294 AP1G2O75843 785 aa12.33□□□□□ -0.44
LINC00343-202ENST00000415294 MTMR2Q13614 643 aa12.33□□□□□ -0.44
LINC00343-202ENST00000415294 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
LINC00343-202ENST00000415294 PRR14Q9BWN1 585 aa12.33□□□□□ -0.44
LINC00343-202ENST00000415294 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
LINC00343-202ENST00000415294 POM121Q96HA1 1249 aa12.32□□□□□ -0.44
LINC00343-202ENST00000415294 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
LINC00343-202ENST00000415294 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
LINC00343-202ENST00000415294 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
LINC00343-202ENST00000415294 USP17L8P0C7I0 530 aa12.3□□□□□ -0.44
LINC00343-202ENST00000415294 PTPN5P54829 565 aa12.3□□□□□ -0.44
LINC00343-202ENST00000415294 FUT2Q10981 343 aa12.3□□□□□ -0.44
LINC00343-202ENST00000415294 LRCH3Q96II8 777 aa12.3□□□□□ -0.44
LINC00343-202ENST00000415294 ARID3CA6NKF2 412 aa12.29□□□□□ -0.44
LINC00343-202ENST00000415294 WNT2BQ93097 391 aa12.29□□□□□ -0.44
LINC00343-202ENST00000415294 UNC13AQ9UPW8 1703 aa12.28□□□□□ -0.44
LINC00343-202ENST00000415294 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.28□□□□□ -0.44
LINC00343-202ENST00000415294 RNF40O75150 1001 aa12.27□□□□□ -0.45
LINC00343-202ENST00000415294 Q3C1V9 767 aa12.26□□□□□ -0.45
LINC00343-202ENST00000415294 THSD4Q6ZMP0 1018 aa12.26□□□□□ -0.45
LINC00343-202ENST00000415294 ACTN4O43707 911 aaKnown RBP12.25□□□□□ -0.45
LINC00343-202ENST00000415294 ANKK1Q8NFD2 765 aa12.25□□□□□ -0.45
LINC00343-202ENST00000415294 C6orf229H3BNL8 230 aa12.24□□□□□ -0.45
LINC00343-202ENST00000415294 GUCA2AQ02747 115 aa12.24□□□□□ -0.45
LINC00343-202ENST00000415294 GDPD2Q9HCC8 539 aa12.24□□□□□ -0.45
LINC00343-202ENST00000415294 ZNF330Q9Y3S2 320 aaPredicted RBP12.24□□□□□ -0.45
LINC00343-202ENST00000415294 NDUFB9Q9Y6M9 179 aa12.24□□□□□ -0.45
LINC00343-202ENST00000415294 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
LINC00343-202ENST00000415294 HLA-CQ95604 372 aa12.23□□□□□ -0.45
LINC00343-202ENST00000415294 SERPINA10Q9UK55 444 aa12.23□□□□□ -0.45
LINC00343-202ENST00000415294 BICRAQ9NZM4 1560 aa12.23□□□□□ -0.45
LINC00343-202ENST00000415294 CCDC82Q8N4S0 544 aa12.22□□□□□ -0.45
LINC00343-202ENST00000415294 ARID3AQ99856 593 aa12.22□□□□□ -0.45
LINC00343-202ENST00000415294 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
LINC00343-202ENST00000415294 MORN1Q5T089 497 aa12.21□□□□□ -0.45
LINC00343-202ENST00000415294 NACADO15069 1562 aa12.21□□□□□ -0.46
LINC00343-202ENST00000415294 DESI1Q6ICB0 168 aa12.2□□□□□ -0.46
LINC00343-202ENST00000415294 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
LINC00343-202ENST00000415294 CCDC97Q96F63 343 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-202ENST00000415294 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
LINC00343-202ENST00000415294 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
LINC00343-202ENST00000415294 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
LINC00343-202ENST00000415294 SALL2Q9Y467 1007 aaPredicted RBP12.19□□□□□ -0.46
LINC00343-202ENST00000415294 CFAP99D6REC4 459 aa12.18□□□□□ -0.46
LINC00343-202ENST00000415294 ABL2P42684 1182 aa12.18□□□□□ -0.46
LINC00343-202ENST00000415294 TBC1D2BQ9UPU7 963 aa12.18□□□□□ -0.46
LINC00343-202ENST00000415294 PPP4CP60510 307 aa12.17□□□□□ -0.46
LINC00343-202ENST00000415294 WASHC4Q2M389 1173 aa12.17□□□□□ -0.46
LINC00343-202ENST00000415294 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
LINC00343-202ENST00000415294 PRR7Q8TB68 274 aa12.16□□□□□ -0.46
LINC00343-202ENST00000415294 TSC1Q92574 1164 aa12.15□□□□□ -0.46
LINC00343-202ENST00000415294 SLC27A5Q9Y2P5 690 aa12.15□□□□□ -0.46
LINC00343-202ENST00000415294 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
LINC00343-202ENST00000415294 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
LINC00343-202ENST00000415294 HPS5Q9UPZ3 1129 aa12.13□□□□□ -0.47
LINC00343-202ENST00000415294 NR1I2O75469 434 aa12.12□□□□□ -0.47
LINC00343-202ENST00000415294 BCAMP50895 628 aa12.12□□□□□ -0.47
LINC00343-202ENST00000415294 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
LINC00343-202ENST00000415294 LRRN4Q8WUT4 740 aa12.11□□□□□ -0.47
LINC00343-202ENST00000415294 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
LINC00343-202ENST00000415294 SYMPKQ92797 1274 aaKnown RBP12.11□□□□□ -0.47
LINC00343-202ENST00000415294 BRICD5Q6PL45 260 aa12.1□□□□□ -0.47
LINC00343-202ENST00000415294 USB1Q9BQ65 265 aaKnown RBP12.1□□□□□ -0.47
LINC00343-202ENST00000415294 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
LINC00343-202ENST00000415294 APLP1P51693 650 aa12.09□□□□□ -0.47
LINC00343-202ENST00000415294 IRF5Q13568 498 aa12.09□□□□□ -0.47
LINC00343-202ENST00000415294 LYPD8Q6UX82 237 aa12.09□□□□□ -0.47
LINC00343-202ENST00000415294 CALR3Q96L12 384 aaKnown RBP12.09□□□□□ -0.47
LINC00343-202ENST00000415294 FMNL1O95466 1100 aaPredicted RBP12.08□□□□□ -0.48
LINC00343-202ENST00000415294 NYAP1Q6ZVC0 841 aa12.08□□□□□ -0.48
LINC00343-202ENST00000415294 GLMNQ92990 594 aa12.07□□□□□ -0.48
LINC00343-202ENST00000415294 GPR37L1O60883 481 aa12.06□□□□□ -0.48
LINC00343-202ENST00000415294 SOX11P35716 441 aa12.06□□□□□ -0.48
LINC00343-202ENST00000415294 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
LINC00343-202ENST00000415294 CUX2O14529 1486 aa12.05□□□□□ -0.48
LINC00343-202ENST00000415294 BLOC1S3Q6QNY0 202 aa12.04□□□□□ -0.48
LINC00343-202ENST00000415294 RNF19BQ6ZMZ0 732 aa12.04□□□□□ -0.48
LINC00343-202ENST00000415294 THAP11Q96EK4 314 aa12.04□□□□□ -0.48
LINC00343-202ENST00000415294 IFFO2Q5TF58 517 aa12.03□□□□□ -0.48
LINC00343-202ENST00000415294 POM121CA8CG34 1229 aa12.02□□□□□ -0.49
LINC00343-202ENST00000415294 PER1O15534 1290 aaPredicted RBP12.02□□□□□ -0.49
LINC00343-202ENST00000415294 PPP1R15AO75807 674 aaPredicted RBP12.02□□□□□ -0.49
LINC00343-202ENST00000415294 JUNDP17535 347 aa12.02□□□□□ -0.49
LINC00343-202ENST00000415294 NR6A1Q15406 480 aa12.02□□□□□ -0.49
LINC00343-202ENST00000415294 PTPRNQ16849 979 aa12.02□□□□□ -0.49
LINC00343-202ENST00000415294 MSS51Q4VC12 460 aa12.02□□□□□ -0.49
LINC00343-202ENST00000415294 WBP1LQ9NX94 342 aa12.02□□□□□ -0.49
LINC00343-202ENST00000415294 ZC3H4Q9UPT8 1303 aaKnown RBP12.01□□□□□ -0.49
LINC00343-202ENST00000415294 EPS8L1Q8TE68 723 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 249.8 ms