RNA–Protein interactions for RNA: ENST00000415193.5

LINC01047-201, Transcript of long intergenic non-protein coding RNA 1047, humanhuman

TSL 5 BASIC

Gene LINC01047, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01047-201ENST00000415193 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
LINC01047-201ENST00000415193 NDUFV2P19404 249 aa11.94□□□□□ -0.5
LINC01047-201ENST00000415193 UCN2Q96RP3 112 aa11.94□□□□□ -0.5
LINC01047-201ENST00000415193 C6orf132Q5T0Z8 1188 aa11.93□□□□□ -0.5
LINC01047-201ENST00000415193 CABLES1Q8TDN4 633 aa11.93□□□□□ -0.5
LINC01047-201ENST00000415193 SOX11P35716 441 aa11.92□□□□□ -0.5
LINC01047-201ENST00000415193 RCCD1A6NED2 376 aa11.91□□□□□ -0.5
LINC01047-201ENST00000415193 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
LINC01047-201ENST00000415193 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
LINC01047-201ENST00000415193 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
LINC01047-201ENST00000415193 ERCC3P19447 782 aa11.9□□□□□ -0.5
LINC01047-201ENST00000415193 PRSS12P56730 875 aa11.9□□□□□ -0.5
LINC01047-201ENST00000415193 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
LINC01047-201ENST00000415193 HMX1Q9NP08 348 aaPredicted RBP11.9□□□□□ -0.5
LINC01047-201ENST00000415193 CCER1Q8TC90 406 aaPredicted RBP11.89□□□□□ -0.51
LINC01047-201ENST00000415193 HOXB1P14653 301 aaPredicted RBP11.88□□□□□ -0.51
LINC01047-201ENST00000415193 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
LINC01047-201ENST00000415193 FOSBP53539 338 aa11.87□□□□□ -0.51
LINC01047-201ENST00000415193 TXNDC2Q86VQ3 553 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 PRR7Q8TB68 274 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 ERBB3P21860 1342 aa11.86□□□□□ -0.51
LINC01047-201ENST00000415193 HOXB3P14651 431 aaPredicted RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
LINC01047-201ENST00000415193 ELOAQ14241 798 aaKnown RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 MRRFQ96E11 262 aaKnown RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 EYA1Q99502 592 aa11.84□□□□□ -0.51
LINC01047-201ENST00000415193 KIAA1522Q9P206 1035 aaPredicted RBP11.84□□□□□ -0.51
LINC01047-201ENST00000415193 ZDHHC16Q969W1 377 aa11.83□□□□□ -0.52
LINC01047-201ENST00000415193 KDM4AO75164 1064 aa11.82□□□□□ -0.52
LINC01047-201ENST00000415193 SEMA3FQ13275 785 aa11.82□□□□□ -0.52
LINC01047-201ENST00000415193 DNAJC14Q6Y2X3 702 aaPredicted RBP11.82□□□□□ -0.52
LINC01047-201ENST00000415193 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
LINC01047-201ENST00000415193 ATP9BO43861 1147 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 DNAJB2P25686 324 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 USP46P62068 366 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
LINC01047-201ENST00000415193 HELBQ8NG08 1087 aaPredicted RBP11.81□□□□□ -0.52
LINC01047-201ENST00000415193 KDM4FA0A1W2PPD8 638 aa11.8□□□□□ -0.52
LINC01047-201ENST00000415193 FDX1P10109 184 aa11.79□□□□□ -0.52
LINC01047-201ENST00000415193 TMEM164Q5U3C3 297 aa11.78□□□□□ -0.52
LINC01047-201ENST00000415193 LRRN4Q8WUT4 740 aa11.78□□□□□ -0.52
LINC01047-201ENST00000415193 SIRT1Q96EB6 747 aa11.78□□□□□ -0.52
LINC01047-201ENST00000415193 HOXA2O43364 376 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 KANK4Q5T7N3 995 aaPredicted RBP11.77□□□□□ -0.53
LINC01047-201ENST00000415193 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
LINC01047-201ENST00000415193 ZNF454Q8N9F8 522 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 TMEM134Q9H6X4 195 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 FAM198AQ9UFP1 575 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.53
LINC01047-201ENST00000415193 ZNF16P17020 682 aaPredicted RBP11.76□□□□□ -0.53
LINC01047-201ENST00000415193 PHLDB3Q6NSJ2 640 aa11.76□□□□□ -0.53
LINC01047-201ENST00000415193 ARID4AP29374 1257 aaPredicted RBP11.75□□□□□ -0.53
LINC01047-201ENST00000415193 DOK7Q18PE1 504 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 RDH13Q8NBN7 331 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 PNMA1Q8ND90 353 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 STK32AQ8WU08 396 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
LINC01047-201ENST00000415193 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC01047-201ENST00000415193 MTMR2Q13614 643 aa11.74□□□□□ -0.53
LINC01047-201ENST00000415193 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
LINC01047-201ENST00000415193 TCF3P15923 654 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 EPS8L1Q8TE68 723 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 BCL2L13Q9BXK5 485 aa11.73□□□□□ -0.53
LINC01047-201ENST00000415193 VARS2Q5ST30 1063 aaKnown RBP11.72□□□□□ -0.53
LINC01047-201ENST00000415193 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
LINC01047-201ENST00000415193 GCGRP47871 477 aa11.71□□□□□ -0.53
LINC01047-201ENST00000415193 NUDT18Q6ZVK8 323 aa11.71□□□□□ -0.53
LINC01047-201ENST00000415193 TSC1Q92574 1164 aa11.71□□□□□ -0.53
LINC01047-201ENST00000415193 SOWAHDA6NJG2 315 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 SSFA2P28290 1259 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 NOM1Q5C9Z4 860 aaKnown RBP11.7□□□□□ -0.54
LINC01047-201ENST00000415193 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
LINC01047-201ENST00000415193 NFATC2IPQ8NCF5 419 aa11.69□□□□□ -0.54
LINC01047-201ENST00000415193 CFAP99D6REC4 459 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
LINC01047-201ENST00000415193 GUCA2AQ02747 115 aa11.67□□□□□ -0.54
LINC01047-201ENST00000415193 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
LINC01047-201ENST00000415193 MARSP56192 900 aaKnown RBP11.66□□□□□ -0.54
LINC01047-201ENST00000415193 C3orf80F5H4A9 247 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 NR6A1Q15406 480 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 DRC1Q96MC2 740 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
LINC01047-201ENST00000415193 USP17L3A6NCW0 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 USP17L4A6NCW7 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 FAM196BA6NMK8 535 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 COL9A1P20849 921 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 USP17L1Q7RTZ2 530 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 SREK1Q8WXA9 508 aaKnown RBP11.64□□□□□ -0.55
LINC01047-201ENST00000415193 TATDN2Q93075 761 aa11.64□□□□□ -0.55
LINC01047-201ENST00000415193 VAMP1P23763 118 aa11.63□□□□□ -0.55
LINC01047-201ENST00000415193 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
LINC01047-201ENST00000415193 NR1H3Q13133 447 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms