RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 MED14O60244 1454 aa8.53□□□□□ -1.04
ITGB1-203ENST00000414670 SAFB2Q14151 953 aaKnown RBP eCLIP8.53□□□□□ -1.04
ITGB1-203ENST00000414670 EVC2Q86UK5 1308 aa8.53□□□□□ -1.04
ITGB1-203ENST00000414670 NRXN3Q9Y4C0 1643 aa8.52□□□□□ -1.05
ITGB1-203ENST00000414670 YTHDC1Q96MU7 727 aaKnown RBP8.52□□□□□ -1.05
ITGB1-203ENST00000414670 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
ITGB1-203ENST00000414670 DLC1Q96QB1 1528 aa8.52□□□□□ -1.05
ITGB1-203ENST00000414670 TECPR2O15040 1411 aa8.52□□□□□ -1.05
ITGB1-203ENST00000414670 WAPLQ7Z5K2 1190 aa8.51□□□□□ -1.05
ITGB1-203ENST00000414670 PANK3Q9H999 370 aa8.51□□□□□ -1.05
ITGB1-203ENST00000414670 FAM135BQ49AJ0 1406 aa8.51□□□□□ -1.05
ITGB1-203ENST00000414670 MINK1Q8N4C8 1332 aaPredicted RBP8.51□□□□□ -1.05
ITGB1-203ENST00000414670 PIK3R4Q99570 1358 aa8.5□□□□□ -1.05
ITGB1-203ENST00000414670 PLEKHH1Q9ULM0 1364 aa8.5□□□□□ -1.05
ITGB1-203ENST00000414670 ZNF142P52746 1687 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-203ENST00000414670 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
ITGB1-203ENST00000414670 ROBO2Q9HCK4 1378 aa8.49□□□□□ -1.05
ITGB1-203ENST00000414670 NPHP4O75161 1426 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-203ENST00000414670 PTPRUQ92729 1446 aa8.49□□□□□ -1.05
ITGB1-203ENST00000414670 CCER2I3L3R5 266 aa8.49□□□□□ -1.05
ITGB1-203ENST00000414670 PER1O15534 1290 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-203ENST00000414670 SRPK2P78362 688 aaKnown RBP8.49□□□□□ -1.05
ITGB1-203ENST00000414670 PRKRIP1Q9H875 184 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-203ENST00000414670 CABP2Q9NPB3 220 aa8.49□□□□□ -1.05
ITGB1-203ENST00000414670 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
ITGB1-203ENST00000414670 SETD1AO15047 1707 aaKnown RBP8.49□□□□□ -1.05
ITGB1-203ENST00000414670 DIP2AQ14689 1571 aa8.48□□□□□ -1.05
ITGB1-203ENST00000414670 TMC1Q8TDI8 760 aa8.48□□□□□ -1.05
ITGB1-203ENST00000414670 CDK19Q9BWU1 502 aa8.48□□□□□ -1.05
ITGB1-203ENST00000414670 POLR1AO95602 1720 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-203ENST00000414670 ARHGEF28Q8N1W1 1705 aaKnown RBP8.48□□□□□ -1.05
ITGB1-203ENST00000414670 TULP4Q9NRJ4 1543 aa8.48□□□□□ -1.05
ITGB1-203ENST00000414670 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
ITGB1-203ENST00000414670 HSPA2P54652 639 aa8.47□□□□□ -1.05
ITGB1-203ENST00000414670 C1QBPQ07021 282 aaKnown RBP8.47□□□□□ -1.05
ITGB1-203ENST00000414670 SLC12A5Q9H2X9 1139 aa8.47□□□□□ -1.05
ITGB1-203ENST00000414670 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
ITGB1-203ENST00000414670 SETD1BQ9UPS6 1966 aaKnown RBP8.47□□□□□ -1.05
ITGB1-203ENST00000414670 CPS1P31327 1500 aa8.47□□□□□ -1.05
ITGB1-203ENST00000414670 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
ITGB1-203ENST00000414670 QRICH2Q9H0J4 1663 aa8.46□□□□□ -1.05
ITGB1-203ENST00000414670 PTCH1Q13635 1447 aa8.46□□□□□ -1.05
ITGB1-203ENST00000414670 KCNA6P17658 529 aa8.46□□□□□ -1.06
ITGB1-203ENST00000414670 CNGB1Q14028 1251 aaPredicted RBP8.46□□□□□ -1.06
ITGB1-203ENST00000414670 RALBP1Q15311 655 aa8.46□□□□□ -1.06
ITGB1-203ENST00000414670 KTN1Q86UP2 1357 aaKnown RBP8.46□□□□□ -1.06
ITGB1-203ENST00000414670 NINLQ9Y2I6 1382 aa8.46□□□□□ -1.06
ITGB1-203ENST00000414670 AMER1Q5JTC6 1135 aaPredicted RBP8.44□□□□□ -1.06
ITGB1-203ENST00000414670 CC2D1BQ5T0F9 858 aaKnown RBP8.44□□□□□ -1.06
ITGB1-203ENST00000414670 CARD14Q9BXL6 1004 aa8.44□□□□□ -1.06
ITGB1-203ENST00000414670 KNDC1Q76NI1 1749 aa8.43□□□□□ -1.06
ITGB1-203ENST00000414670 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
ITGB1-203ENST00000414670 TERF2IPQ9NYB0 399 aa8.43□□□□□ -1.06
ITGB1-203ENST00000414670 CABP1Q9NZU7 370 aa8.43□□□□□ -1.06
ITGB1-203ENST00000414670 CCDC61Q9Y6R9 512 aa8.43□□□□□ -1.06
ITGB1-203ENST00000414670 ANKRD36BQ8N2N9 1353 aa8.43□□□□□ -1.06
ITGB1-203ENST00000414670 NPC1L1Q9UHC9 1359 aa8.43□□□□□ -1.06
ITGB1-203ENST00000414670 HDGFL2Q7Z4V5 671 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-203ENST00000414670 MYBBP1AQ9BQG0 1328 aaKnown RBP8.42□□□□□ -1.06
ITGB1-203ENST00000414670 PARD3Q8TEW0 1356 aa8.42□□□□□ -1.06
ITGB1-203ENST00000414670 XRN1Q8IZH2 1706 aaKnown RBP8.41□□□□□ -1.06
ITGB1-203ENST00000414670 NSD3Q9BZ95 1437 aa8.41□□□□□ -1.06
ITGB1-203ENST00000414670 A0A1W2PP64 1363 aa8.41□□□□□ -1.06
ITGB1-203ENST00000414670 PRR36Q9H6K5 1346 aa8.41□□□□□ -1.06
ITGB1-203ENST00000414670 DCAF8L1A6NGE4 600 aa8.41□□□□□ -1.06
ITGB1-203ENST00000414670 MRS2Q9HD23 443 aa8.41□□□□□ -1.06
ITGB1-203ENST00000414670 CGNL1Q0VF96 1302 aa8.4□□□□□ -1.06
ITGB1-203ENST00000414670 CCDC184Q52MB2 194 aa8.4□□□□□ -1.06
ITGB1-203ENST00000414670 NLRP13Q86W25 1043 aa8.4□□□□□ -1.06
ITGB1-203ENST00000414670 PROSER2Q86WR7 435 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-203ENST00000414670 MYOM1P52179 1685 aa8.4□□□□□ -1.07
ITGB1-203ENST00000414670 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
ITGB1-203ENST00000414670 ATP7BP35670 1465 aa8.39□□□□□ -1.07
ITGB1-203ENST00000414670 PPIP5K1Q6PFW1 1433 aa8.39□□□□□ -1.07
ITGB1-203ENST00000414670 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
ITGB1-203ENST00000414670 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
ITGB1-203ENST00000414670 ERICH6BQ5W0A0 696 aa8.39□□□□□ -1.07
ITGB1-203ENST00000414670 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
ITGB1-203ENST00000414670 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
ITGB1-203ENST00000414670 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
ITGB1-203ENST00000414670 CD163L1Q9NR16 1453 aa8.38□□□□□ -1.07
ITGB1-203ENST00000414670 BRD4O60885 1362 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-203ENST00000414670 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-203ENST00000414670 PLEKHG3A1L390 1219 aa8.38□□□□□ -1.07
ITGB1-203ENST00000414670 PPP2R1AP30153 589 aa8.38□□□□□ -1.07
ITGB1-203ENST00000414670 MORC1Q86VD1 984 aa8.38□□□□□ -1.07
ITGB1-203ENST00000414670 ZNF692Q9BU19 519 aaPredicted RBP8.38□□□□□ -1.07
ITGB1-203ENST00000414670 NKTRP30414 1462 aaKnown RBP8.38□□□□□ -1.07
ITGB1-203ENST00000414670 CPSF1Q10570 1443 aaKnown RBP8.37□□□□□ -1.07
ITGB1-203ENST00000414670 ADGRL3Q9HAR2 1447 aa8.37□□□□□ -1.07
ITGB1-203ENST00000414670 NSD2O96028 1365 aa8.37□□□□□ -1.07
ITGB1-203ENST00000414670 NWD1Q149M9 1564 aa8.37□□□□□ -1.07
ITGB1-203ENST00000414670 ANKARQ7Z5J8 1434 aa8.37□□□□□ -1.07
ITGB1-203ENST00000414670 ACEP12821 1306 aa8.36□□□□□ -1.07
ITGB1-203ENST00000414670 FYB1O15117 783 aa8.36□□□□□ -1.07
ITGB1-203ENST00000414670 TMEM94Q12767 1356 aa8.35□□□□□ -1.07
ITGB1-203ENST00000414670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.35□□□□□ -1.079e-7■■■□□ 16.9
ITGB1-203ENST00000414670 FAM9BQ8IZU0 186 aa8.35□□□□□ -1.07
ITGB1-203ENST00000414670 NGDNQ8NEJ9 315 aaKnown RBP8.35□□□□□ -1.07
ITGB1-203ENST00000414670 PMFBP1Q8TBY8 1022 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms