RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 COL17A1Q9UMD9 1497 aaPredicted RBP6.15□□□□□ -1.43
LINC01048-201ENST00000414480 TRIM67Q6ZTA4 783 aa6.14□□□□□ -1.43
LINC01048-201ENST00000414480 SPRYD3Q8NCJ5 442 aa6.14□□□□□ -1.43
LINC01048-201ENST00000414480 NPDC1Q9NQX5 325 aaPredicted RBP6.14□□□□□ -1.43
LINC01048-201ENST00000414480 GRIN2AQ12879 1464 aa6.14□□□□□ -1.43
LINC01048-201ENST00000414480 RNF223E7ERA6 249 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 DGAT1O75907 488 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 PRR20EP86478 221 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 PRR20CP86479 221 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 PRR20DP86480 221 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 PRR20BP86481 221 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 PRR20AP86496 221 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 C14orf37Q86TY3 774 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 EYA1Q99502 592 aa6.13□□□□□ -1.43
LINC01048-201ENST00000414480 SPRYD7Q5W111 196 aa6.12□□□□□ -1.43
LINC01048-201ENST00000414480 BLOC1S3Q6QNY0 202 aa6.12□□□□□ -1.43
LINC01048-201ENST00000414480 ZNF598Q86UK7 904 aaKnown RBP6.12□□□□□ -1.43
LINC01048-201ENST00000414480 ANKLE1Q8NAG6 615 aa6.12□□□□□ -1.43
LINC01048-201ENST00000414480 PBRM1Q86U86 1689 aa6.1□□□□□ -1.43
LINC01048-201ENST00000414480 ADCY10Q96PN6 1610 aa6.1□□□□□ -1.43
LINC01048-201ENST00000414480 CUX1P39880 1505 aa6.1□□□□□ -1.43
LINC01048-201ENST00000414480 PRG4Q92954 1404 aaPredicted RBP6.1□□□□□ -1.43
LINC01048-201ENST00000414480 DISP3Q9P2K9 1392 aa6.1□□□□□ -1.43
LINC01048-201ENST00000414480 TLL1O43897 1013 aa6.1□□□□□ -1.43
LINC01048-201ENST00000414480 DNAJB2P25686 324 aa6.1□□□□□ -1.43
LINC01048-201ENST00000414480 EMID1Q96A84 441 aaPredicted RBP6.1□□□□□ -1.43
LINC01048-201ENST00000414480 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.1□□□□□ -1.43
LINC01048-201ENST00000414480 PPRC1Q5VV67 1664 aaKnown RBP6.1□□□□□ -1.43
LINC01048-201ENST00000414480 ABCA5Q8WWZ7 1642 aa6.1□□□□□ -1.43
LINC01048-201ENST00000414480 TSPOAP1O95153 1857 aa6.09□□□□□ -1.43
LINC01048-201ENST00000414480 KMT5BQ4FZB7 885 aa6.09□□□□□ -1.43
LINC01048-201ENST00000414480 ZNF697Q5TEC3 545 aa6.09□□□□□ -1.43
LINC01048-201ENST00000414480 FAM187AA6NFU0 413 aa6.08□□□□□ -1.44
LINC01048-201ENST00000414480 ABCA10Q8WWZ4 1543 aa6.08□□□□□ -1.44
LINC01048-201ENST00000414480 ADAMTS12P58397 1594 aa6.07□□□□□ -1.44
LINC01048-201ENST00000414480 ACTN4O43707 911 aaKnown RBP6.07□□□□□ -1.44
LINC01048-201ENST00000414480 S1PR4O95977 384 aa6.07□□□□□ -1.44
LINC01048-201ENST00000414480 RBM46Q8TBY0 533 aaKnown RBP6.07□□□□□ -1.44
LINC01048-201ENST00000414480 TMEM134Q9H6X4 195 aa6.07□□□□□ -1.44
LINC01048-201ENST00000414480 PPEF1O14829 653 aaPredicted RBP6.06□□□□□ -1.44
LINC01048-201ENST00000414480 GDF9O60383 454 aa6.06□□□□□ -1.44
LINC01048-201ENST00000414480 ADH1BP00325 375 aa6.06□□□□□ -1.44
LINC01048-201ENST00000414480 LIAT1Q6ZQX7 453 aa6.06□□□□□ -1.44
LINC01048-201ENST00000414480 TNFRSF10AO00220 468 aa6.05□□□□□ -1.44
LINC01048-201ENST00000414480 CFHP08603 1231 aa6.05□□□□□ -1.44
LINC01048-201ENST00000414480 GLI2P10070 1586 aa6.05□□□□□ -1.44
LINC01048-201ENST00000414480 POTECB2RU33 542 aa6.04□□□□□ -1.44
LINC01048-201ENST00000414480 NR1I2O75469 434 aa6.04□□□□□ -1.44
LINC01048-201ENST00000414480 PLCB2Q00722 1185 aa6.04□□□□□ -1.44
LINC01048-201ENST00000414480 PTGDRQ13258 359 aa6.04□□□□□ -1.44
LINC01048-201ENST00000414480 LMOD2Q6P5Q4 547 aa6.04□□□□□ -1.44
LINC01048-201ENST00000414480 ADGRG1Q9Y653 693 aa6.04□□□□□ -1.44
LINC01048-201ENST00000414480 FHAD1B1AJZ9 1412 aa6.04□□□□□ -1.44
LINC01048-201ENST00000414480 TOP2BQ02880 1626 aa6.03□□□□□ -1.44
LINC01048-201ENST00000414480 CFAP44Q96MT7 982 aa6.03□□□□□ -1.44
LINC01048-201ENST00000414480 SLC6A16Q9GZN6 736 aa6.03□□□□□ -1.44
LINC01048-201ENST00000414480 RCCD1A6NED2 376 aa6.02□□□□□ -1.45
LINC01048-201ENST00000414480 ST8SIA5O15466 376 aa6.02□□□□□ -1.45
LINC01048-201ENST00000414480 TREML4Q6UXN2 200 aa6.02□□□□□ -1.45
LINC01048-201ENST00000414480 PAXIP1Q6ZW49 1069 aaPredicted RBP6.02□□□□□ -1.45
LINC01048-201ENST00000414480 AAASQ9NRG9 546 aa6.02□□□□□ -1.45
LINC01048-201ENST00000414480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.01□□□□□ -1.45
LINC01048-201ENST00000414480 MLLT3P42568 568 aaPredicted RBP6.01□□□□□ -1.45
LINC01048-201ENST00000414480 SPATA31D1Q6ZQQ2 1576 aa6.01□□□□□ -1.45
LINC01048-201ENST00000414480 ASXL2Q76L83 1435 aa6□□□□□ -1.45
LINC01048-201ENST00000414480 SLC10A3P09131 477 aa6□□□□□ -1.45
LINC01048-201ENST00000414480 PLA2G2CQ5R387 149 aa6□□□□□ -1.45
LINC01048-201ENST00000414480 CRIPAKQ8N1N5 446 aa6□□□□□ -1.45
LINC01048-201ENST00000414480 ARHGEF1Q92888 912 aaKnown RBP6□□□□□ -1.45
LINC01048-201ENST00000414480 PTPRMP28827 1452 aa6□□□□□ -1.45
LINC01048-201ENST00000414480 RUSC2Q8N2Y8 1516 aa5.99□□□□□ -1.45
LINC01048-201ENST00000414480 PCF11O94913 1555 aaKnown RBP5.99□□□□□ -1.45
LINC01048-201ENST00000414480 TMEM132AQ24JP5 1023 aa5.99□□□□□ -1.45
LINC01048-201ENST00000414480 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
LINC01048-201ENST00000414480 PKD2L1Q9P0L9 805 aa5.99□□□□□ -1.45
LINC01048-201ENST00000414480 MAP3K4Q9Y6R4 1608 aa5.99□□□□□ -1.45
LINC01048-201ENST00000414480 ABCC2Q92887 1545 aa5.99□□□□□ -1.45
LINC01048-201ENST00000414480 PLB1Q6P1J6 1458 aa5.98□□□□□ -1.45
LINC01048-201ENST00000414480 FOXC1Q12948 553 aa5.98□□□□□ -1.45
LINC01048-201ENST00000414480 RSPH4AQ5TD94 716 aa5.98□□□□□ -1.45
LINC01048-201ENST00000414480 SCUBE3Q8IX30 993 aa5.98□□□□□ -1.45
LINC01048-201ENST00000414480 EPRSP07814 1512 aaKnown RBP5.98□□□□□ -1.45
LINC01048-201ENST00000414480 AVPP01185 164 aa5.97□□□□□ -1.45
LINC01048-201ENST00000414480 PDIA4P13667 645 aaKnown RBP5.97□□□□□ -1.45
LINC01048-201ENST00000414480 RPIAP49247 311 aa5.97□□□□□ -1.45
LINC01048-201ENST00000414480 FAM161AQ3B820 660 aa5.97□□□□□ -1.45
LINC01048-201ENST00000414480 SPSB2Q99619 263 aa5.97□□□□□ -1.45
LINC01048-201ENST00000414480 ERICH3Q5RHP9 1530 aa5.97□□□□□ -1.45
LINC01048-201ENST00000414480 ADAMTSL3P82987 1691 aa5.97□□□□□ -1.45
LINC01048-201ENST00000414480 NUTM2FA1L443 756 aa5.96□□□□□ -1.46
LINC01048-201ENST00000414480 FCHSD2O94868 740 aa5.96□□□□□ -1.46
LINC01048-201ENST00000414480 OATP04181 439 aa5.96□□□□□ -1.46
LINC01048-201ENST00000414480 TEX14Q8IWB6 1497 aa5.96□□□□□ -1.46
LINC01048-201ENST00000414480 NEFLP07196 543 aa5.95□□□□□ -1.46
LINC01048-201ENST00000414480 HSPA2P54652 639 aa5.95□□□□□ -1.46
LINC01048-201ENST00000414480 CTC1Q2NKJ3 1217 aa5.95□□□□□ -1.46
LINC01048-201ENST00000414480 PUS10Q3MIT2 529 aaKnown RBP5.95□□□□□ -1.46
LINC01048-201ENST00000414480 FAM9AQ8IZU1 332 aaPredicted RBP5.95□□□□□ -1.46
LINC01048-201ENST00000414480 PXYLP1Q8TE99 480 aa5.95□□□□□ -1.46
LINC01048-201ENST00000414480 TOR4AQ9NXH8 423 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms