RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 CGNL1Q0VF96 1302 aa17.86■□□□□ 0.45
NUB1-201ENST00000413040 IGHDP01880 384 aa17.85■□□□□ 0.45
NUB1-201ENST00000413040 MYOM2P54296 1465 aa17.85■□□□□ 0.45
NUB1-201ENST00000413040 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
NUB1-201ENST00000413040 MYOM1P52179 1685 aa17.85■□□□□ 0.45
NUB1-201ENST00000413040 EFCAB6Q5THR3 1501 aa17.85■□□□□ 0.45
NUB1-201ENST00000413040 VWDEQ8N2E2 1590 aa17.84■□□□□ 0.45
NUB1-201ENST00000413040 EVC2Q86UK5 1308 aa17.84■□□□□ 0.45
NUB1-201ENST00000413040 GGNBP2Q9H3C7 697 aa17.83■□□□□ 0.45
NUB1-201ENST00000413040 TNNQ9UQP3 1299 aa17.83■□□□□ 0.45
NUB1-201ENST00000413040 MROH1Q8NDA8 1641 aa17.83■□□□□ 0.45
NUB1-201ENST00000413040 IDI1Q13907 227 aa17.83■□□□□ 0.44
NUB1-201ENST00000413040 PPRC1Q5VV67 1664 aaKnown RBP17.82■□□□□ 0.44
NUB1-201ENST00000413040 STAG3Q9UJ98 1225 aa17.82■□□□□ 0.44
NUB1-201ENST00000413040 MINK1Q8N4C8 1332 aaPredicted RBP17.82■□□□□ 0.44
NUB1-201ENST00000413040 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
NUB1-201ENST00000413040 KIDINS220Q9ULH0 1771 aa17.82■□□□□ 0.44
NUB1-201ENST00000413040 PPM1GO15355 546 aaPredicted RBP17.82■□□□□ 0.44
NUB1-201ENST00000413040 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
NUB1-201ENST00000413040 POGKQ9P215 609 aa17.81■□□□□ 0.44
NUB1-201ENST00000413040 MROH2AA6NES4 1674 aa17.8■□□□□ 0.44
NUB1-201ENST00000413040 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
NUB1-201ENST00000413040 PDE3AQ14432 1141 aa17.79■□□□□ 0.44
NUB1-201ENST00000413040 SBNO2Q9Y2G9 1366 aa17.78■□□□□ 0.44
NUB1-201ENST00000413040 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
NUB1-201ENST00000413040 RPGRIP1LQ68CZ1 1315 aa17.78■□□□□ 0.44
NUB1-201ENST00000413040 TSR2Q969E8 191 aaKnown RBP17.77■□□□□ 0.44
NUB1-201ENST00000413040 KIAA1210Q9ULL0 1709 aa17.77■□□□□ 0.44
NUB1-201ENST00000413040 POGZQ7Z3K3 1410 aa17.76■□□□□ 0.43
NUB1-201ENST00000413040 RLBP1P12271 317 aa17.76■□□□□ 0.43
NUB1-201ENST00000413040 FTSJ3Q8IY81 847 aaKnown RBP17.74■□□□□ 0.43
NUB1-201ENST00000413040 PRAM1Q96QH2 718 aa17.74■□□□□ 0.43
NUB1-201ENST00000413040 ADGRB3O60242 1522 aa17.73■□□□□ 0.43
NUB1-201ENST00000413040 FBXO31Q5XUX0 539 aaPredicted RBP17.73■□□□□ 0.43
NUB1-201ENST00000413040 MYH16Q9H6N6 1097 aa17.73■□□□□ 0.43
NUB1-201ENST00000413040 MAPK8IP3Q9UPT6 1336 aa17.73■□□□□ 0.43
NUB1-201ENST00000413040 WDR63Q8IWG1 891 aa17.72■□□□□ 0.43
NUB1-201ENST00000413040 PCDHB15Q9Y5E8 787 aa17.72■□□□□ 0.43
NUB1-201ENST00000413040 MLECQ14165 292 aa17.72■□□□□ 0.43
NUB1-201ENST00000413040 NFKBIBQ15653 356 aa17.72■□□□□ 0.43
NUB1-201ENST00000413040 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
NUB1-201ENST00000413040 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
NUB1-201ENST00000413040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.71■□□□□ 0.43
NUB1-201ENST00000413040 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.43
NUB1-201ENST00000413040 FBLN1P23142 703 aa17.71■□□□□ 0.42
NUB1-201ENST00000413040 SEC24BO95487 1268 aa17.7■□□□□ 0.42
NUB1-201ENST00000413040 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
NUB1-201ENST00000413040 EXOSC9Q06265 439 aaKnown RBP17.7■□□□□ 0.42
NUB1-201ENST00000413040 USP35Q9P2H5 1018 aa17.69■□□□□ 0.42
NUB1-201ENST00000413040 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
NUB1-201ENST00000413040 LMTK2Q8IWU2 1503 aa17.69■□□□□ 0.42
NUB1-201ENST00000413040 PMFBP1Q8TBY8 1022 aa17.69■□□□□ 0.42
NUB1-201ENST00000413040 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
NUB1-201ENST00000413040 QRICH2Q9H0J4 1663 aa17.69■□□□□ 0.42
NUB1-201ENST00000413040 PDZRN3Q9UPQ7 1066 aa17.68■□□□□ 0.42
NUB1-201ENST00000413040 ABCC3O15438 1527 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 SLC52A1Q9NWF4 448 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 A0A1W2PP64 1363 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 ADGRB1O14514 1584 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 FRMPD1Q5SYB0 1578 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 ZKSCAN2Q63HK3 967 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 RTN4Q9NQC3 1192 aaKnown RBP17.67■□□□□ 0.42
NUB1-201ENST00000413040 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
NUB1-201ENST00000413040 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
NUB1-201ENST00000413040 RIPK4P57078 832 aa17.66■□□□□ 0.42
NUB1-201ENST00000413040 ITPRIPQ8IWB1 547 aa17.66■□□□□ 0.42
NUB1-201ENST00000413040 IFT172Q9UG01 1749 aa17.66■□□□□ 0.42
NUB1-201ENST00000413040 FYB1O15117 783 aa17.66■□□□□ 0.42
NUB1-201ENST00000413040 HDGFL2Q7Z4V5 671 aaPredicted RBP17.66■□□□□ 0.42
NUB1-201ENST00000413040 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
NUB1-201ENST00000413040 HECW2Q9P2P5 1572 aa17.66■□□□□ 0.42
NUB1-201ENST00000413040 DZIP1LQ8IYY4 767 aaKnown RBP17.65■□□□□ 0.42
NUB1-201ENST00000413040 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
NUB1-201ENST00000413040 SETBP1Q9Y6X0 1596 aa17.65■□□□□ 0.42
NUB1-201ENST00000413040 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
NUB1-201ENST00000413040 CDK19Q9BWU1 502 aa17.65■□□□□ 0.42
NUB1-201ENST00000413040 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
NUB1-201ENST00000413040 PPLO60437 1756 aa17.63■□□□□ 0.41
NUB1-201ENST00000413040 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
NUB1-201ENST00000413040 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
NUB1-201ENST00000413040 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
NUB1-201ENST00000413040 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
NUB1-201ENST00000413040 FRAT2O75474 233 aaPredicted RBP17.63■□□□□ 0.41
NUB1-201ENST00000413040 GLI2P10070 1586 aa17.63■□□□□ 0.41
NUB1-201ENST00000413040 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
NUB1-201ENST00000413040 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
NUB1-201ENST00000413040 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
NUB1-201ENST00000413040 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
NUB1-201ENST00000413040 MYO3AQ8NEV4 1616 aa17.62■□□□□ 0.41
NUB1-201ENST00000413040 HMOX1P09601 288 aa17.61■□□□□ 0.41
NUB1-201ENST00000413040 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
NUB1-201ENST00000413040 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
NUB1-201ENST00000413040 FAM69CQ0P6D2 419 aa17.6■□□□□ 0.41
NUB1-201ENST00000413040 NSD2O96028 1365 aa17.59■□□□□ 0.41
NUB1-201ENST00000413040 ELL2O00472 640 aaPredicted RBP17.59■□□□□ 0.41
NUB1-201ENST00000413040 TRIM27P14373 513 aa17.59■□□□□ 0.41
NUB1-201ENST00000413040 PUS7Q96PZ0 661 aaKnown RBP17.59■□□□□ 0.41
NUB1-201ENST00000413040 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
NUB1-201ENST00000413040 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms