RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 KIF13AQ9H1H9 1805 aa17.19■□□□□ 0.34
CLINT1-201ENST00000411809 PTPRMP28827 1452 aa17.19■□□□□ 0.34
CLINT1-201ENST00000411809 TRMT2AQ8IZ69 625 aaKnown RBP17.19■□□□□ 0.34
CLINT1-201ENST00000411809 PUS7Q96PZ0 661 aaKnown RBP17.19■□□□□ 0.34
CLINT1-201ENST00000411809 RCAN3Q9UKA8 241 aa17.19■□□□□ 0.34
CLINT1-201ENST00000411809 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
CLINT1-201ENST00000411809 SPATA31D1Q6ZQQ2 1576 aa17.18■□□□□ 0.34
CLINT1-201ENST00000411809 CENPJQ9HC77 1338 aaPredicted RBP17.18■□□□□ 0.34
CLINT1-201ENST00000411809 POLR3AO14802 1390 aaPredicted RBP17.17■□□□□ 0.34
CLINT1-201ENST00000411809 PRKCSHP14314 528 aaPredicted RBP17.17■□□□□ 0.34
CLINT1-201ENST00000411809 SLC4A3P48751 1232 aa17.15■□□□□ 0.34
CLINT1-201ENST00000411809 GGT6Q6P531 493 aa17.15■□□□□ 0.34
CLINT1-201ENST00000411809 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.15■□□□□ 0.34
CLINT1-201ENST00000411809 NRXN3Q9Y4C0 1643 aa17.14■□□□□ 0.33
CLINT1-201ENST00000411809 DUSP27Q5VZP5 1158 aa17.14■□□□□ 0.33
CLINT1-201ENST00000411809 ADGRB2O60241 1585 aa17.13■□□□□ 0.33
CLINT1-201ENST00000411809 ALKQ9UM73 1620 aa17.13■□□□□ 0.33
CLINT1-201ENST00000411809 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
CLINT1-201ENST00000411809 CD163L1Q9NR16 1453 aa17.12■□□□□ 0.33
CLINT1-201ENST00000411809 NSD3Q9BZ95 1437 aa17.12■□□□□ 0.33
CLINT1-201ENST00000411809 ARHGEF40Q8TER5 1519 aa17.11■□□□□ 0.33
CLINT1-201ENST00000411809 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
CLINT1-201ENST00000411809 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
CLINT1-201ENST00000411809 IDI1Q13907 227 aa17.1■□□□□ 0.33
CLINT1-201ENST00000411809 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
CLINT1-201ENST00000411809 SLC52A1Q9NWF4 448 aa17.09■□□□□ 0.33
CLINT1-201ENST00000411809 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
CLINT1-201ENST00000411809 KIF20BQ96Q89 1820 aa17.09■□□□□ 0.33
CLINT1-201ENST00000411809 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.33
CLINT1-201ENST00000411809 MED14O60244 1454 aa17.08■□□□□ 0.32
CLINT1-201ENST00000411809 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
CLINT1-201ENST00000411809 KNDC1Q76NI1 1749 aa17.08■□□□□ 0.32
CLINT1-201ENST00000411809 SLFN5Q08AF3 891 aa17.07■□□□□ 0.32
CLINT1-201ENST00000411809 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
CLINT1-201ENST00000411809 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
CLINT1-201ENST00000411809 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
CLINT1-201ENST00000411809 NSD2O96028 1365 aa17.06■□□□□ 0.32
CLINT1-201ENST00000411809 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
CLINT1-201ENST00000411809 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
CLINT1-201ENST00000411809 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
CLINT1-201ENST00000411809 A2ML1A8K2U0 1454 aa17.05■□□□□ 0.32
CLINT1-201ENST00000411809 BRPF3Q9ULD4 1205 aa17.04■□□□□ 0.32
CLINT1-201ENST00000411809 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
CLINT1-201ENST00000411809 ABCC11Q96J66 1382 aa17.04■□□□□ 0.32
CLINT1-201ENST00000411809 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
CLINT1-201ENST00000411809 WDR43Q15061 677 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLINT1-201ENST00000411809 SLC12A5Q9H2X9 1139 aa17.03■□□□□ 0.32
CLINT1-201ENST00000411809 YTHDC2Q9H6S0 1430 aaKnown RBP17.03■□□□□ 0.32
CLINT1-201ENST00000411809 NGEFQ8N5V2 710 aa17.03■□□□□ 0.32
CLINT1-201ENST00000411809 DAXXQ9UER7 740 aaPredicted RBP17.03■□□□□ 0.32
CLINT1-201ENST00000411809 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
CLINT1-201ENST00000411809 ARXQ96QS3 562 aa17.02■□□□□ 0.32
CLINT1-201ENST00000411809 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.32
CLINT1-201ENST00000411809 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.31
CLINT1-201ENST00000411809 C20orf194Q5TEA3 1177 aa17.02■□□□□ 0.31
CLINT1-201ENST00000411809 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
CLINT1-201ENST00000411809 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
CLINT1-201ENST00000411809 EIF5BO60841 1220 aaKnown RBP17■□□□□ 0.31
CLINT1-201ENST00000411809 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
CLINT1-201ENST00000411809 CHGAP10645 457 aaKnown RBP16.99■□□□□ 0.31
CLINT1-201ENST00000411809 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
CLINT1-201ENST00000411809 EVC2Q86UK5 1308 aa16.99■□□□□ 0.31
CLINT1-201ENST00000411809 A0A1W2PP64 1363 aa16.99■□□□□ 0.31
CLINT1-201ENST00000411809 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
CLINT1-201ENST00000411809 CYB5RLQ6IPT4 315 aa16.97■□□□□ 0.31
CLINT1-201ENST00000411809 UBR1Q8IWV7 1749 aa16.97■□□□□ 0.31
CLINT1-201ENST00000411809 RGS3P49796 1198 aa16.96■□□□□ 0.31
CLINT1-201ENST00000411809 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.31
CLINT1-201ENST00000411809 APAF1O14727 1248 aa16.96■□□□□ 0.31
CLINT1-201ENST00000411809 MS4A1P11836 297 aa16.96■□□□□ 0.31
CLINT1-201ENST00000411809 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
CLINT1-201ENST00000411809 AKAP12Q02952 1782 aa16.95■□□□□ 0.3
CLINT1-201ENST00000411809 NFKBIBQ15653 356 aa16.95■□□□□ 0.3
CLINT1-201ENST00000411809 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
CLINT1-201ENST00000411809 CGNL1Q0VF96 1302 aa16.95■□□□□ 0.3
CLINT1-201ENST00000411809 USP35Q9P2H5 1018 aa16.95■□□□□ 0.3
CLINT1-201ENST00000411809 FAM69CQ0P6D2 419 aa16.94■□□□□ 0.3
CLINT1-201ENST00000411809 CPS1P31327 1500 aa16.94■□□□□ 0.3
CLINT1-201ENST00000411809 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
CLINT1-201ENST00000411809 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
CLINT1-201ENST00000411809 E9PSI1 815 aa16.93■□□□□ 0.3
CLINT1-201ENST00000411809 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
CLINT1-201ENST00000411809 GSE1Q14687 1217 aa16.92■□□□□ 0.3
CLINT1-201ENST00000411809 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
CLINT1-201ENST00000411809 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
CLINT1-201ENST00000411809 ATP7BP35670 1465 aa16.92■□□□□ 0.3
CLINT1-201ENST00000411809 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
CLINT1-201ENST00000411809 DDRGK1Q96HY6 314 aa16.92■□□□□ 0.3
CLINT1-201ENST00000411809 TECPR2O15040 1411 aa16.91■□□□□ 0.3
CLINT1-201ENST00000411809 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
CLINT1-201ENST00000411809 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
CLINT1-201ENST00000411809 C3P01024 1663 aa16.9■□□□□ 0.3
CLINT1-201ENST00000411809 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
CLINT1-201ENST00000411809 NRKQ7Z2Y5 1582 aa16.9■□□□□ 0.3
CLINT1-201ENST00000411809 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
CLINT1-201ENST00000411809 RUNDC1Q96C34 613 aa16.89■□□□□ 0.29
CLINT1-201ENST00000411809 MTHFSP49914 203 aa16.87■□□□□ 0.29
CLINT1-201ENST00000411809 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
CLINT1-201ENST00000411809 CPSF1Q10570 1443 aaKnown RBP16.87■□□□□ 0.29
CLINT1-201ENST00000411809 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms