RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 NBPF3Q9H094 633 aa7.59□□□□□ -1.19
RNU2-28P-201ENST00000410457 ZNF330Q9Y3S2 320 aaPredicted RBP7.59□□□□□ -1.19
RNU2-28P-201ENST00000410457 CCDC97Q96F63 343 aaPredicted RBP7.58□□□□□ -1.2
RNU2-28P-201ENST00000410457 GDPD2Q9HCC8 539 aa7.58□□□□□ -1.2
RNU2-28P-201ENST00000410457 PCDHGC3Q9UN70 934 aa7.58□□□□□ -1.2
RNU2-28P-201ENST00000410457 TK2O00142 265 aa7.57□□□□□ -1.2
RNU2-28P-201ENST00000410457 MTMR2Q13614 643 aa7.57□□□□□ -1.2
RNU2-28P-201ENST00000410457 AXIN2Q9Y2T1 843 aa7.57□□□□□ -1.2
RNU2-28P-201ENST00000410457 BHMG1C9JSJ3 638 aaPredicted RBP7.56□□□□□ -1.2
RNU2-28P-201ENST00000410457 CFHP08603 1231 aa7.56□□□□□ -1.2
RNU2-28P-201ENST00000410457 SAMD7Q7Z3H4 446 aa7.56□□□□□ -1.2
RNU2-28P-201ENST00000410457 HELBQ8NG08 1087 aaPredicted RBP7.56□□□□□ -1.2
RNU2-28P-201ENST00000410457 NECTIN2Q92692 538 aa7.56□□□□□ -1.2
RNU2-28P-201ENST00000410457 ATP6V1AP38606 617 aa7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 GUCA2AQ02747 115 aa7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 FUT2Q10981 343 aa7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 ANKRD13DQ6ZTN6 518 aa7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 HLA-CQ95604 372 aa7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 GJD4Q96KN9 370 aaPredicted RBP7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 TBC1D2BQ9UPU7 963 aa7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 NDUFB9Q9Y6M9 179 aa7.55□□□□□ -1.2
RNU2-28P-201ENST00000410457 ABL2P42684 1182 aa7.54□□□□□ -1.2
RNU2-28P-201ENST00000410457 IRX2Q9BZI1 471 aaPredicted RBP7.54□□□□□ -1.2
RNU2-28P-201ENST00000410457 KMT5BQ4FZB7 885 aa7.53□□□□□ -1.2
RNU2-28P-201ENST00000410457 ZFRQ96KR1 1074 aaKnown RBP7.53□□□□□ -1.2
RNU2-28P-201ENST00000410457 CTDSPL2Q05D32 466 aa7.52□□□□□ -1.21
RNU2-28P-201ENST00000410457 CFAP99D6REC4 459 aa7.51□□□□□ -1.21
RNU2-28P-201ENST00000410457 C6orf229H3BNL8 230 aa7.51□□□□□ -1.21
RNU2-28P-201ENST00000410457 MRPL50Q8N5N7 158 aaKnown RBP7.51□□□□□ -1.21
RNU2-28P-201ENST00000410457 PRR14Q9BWN1 585 aa7.51□□□□□ -1.21
RNU2-28P-201ENST00000410457 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
RNU2-28P-201ENST00000410457 RNF40O75150 1001 aa7.5□□□□□ -1.21
RNU2-28P-201ENST00000410457 WASHC4Q2M389 1173 aa7.5□□□□□ -1.21
RNU2-28P-201ENST00000410457 CALR3Q96L12 384 aaKnown RBP7.5□□□□□ -1.21
RNU2-28P-201ENST00000410457 HMX1Q9NP08 348 aaPredicted RBP7.5□□□□□ -1.21
RNU2-28P-201ENST00000410457 ACTN4O43707 911 aaKnown RBP7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 GPR37L1O60883 481 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 IRF5Q13568 498 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 Q3C1V9 767 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 MORN1Q5T089 497 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 DESI1Q6ICB0 168 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 RETREG3Q86VR2 466 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 GLMNQ92990 594 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 LRCH3Q96II8 777 aa7.49□□□□□ -1.21
RNU2-28P-201ENST00000410457 POM121CA8CG34 1229 aa7.48□□□□□ -1.21
RNU2-28P-201ENST00000410457 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
RNU2-28P-201ENST00000410457 ADGRD1Q6QNK2 874 aa7.48□□□□□ -1.21
RNU2-28P-201ENST00000410457 PRR7Q8TB68 274 aa7.48□□□□□ -1.21
RNU2-28P-201ENST00000410457 LRRN4Q8WUT4 740 aa7.48□□□□□ -1.21
RNU2-28P-201ENST00000410457 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.48□□□□□ -1.21
RNU2-28P-201ENST00000410457 TSC1Q92574 1164 aa7.47□□□□□ -1.21
RNU2-28P-201ENST00000410457 HRO43593 1189 aa7.46□□□□□ -1.22
RNU2-28P-201ENST00000410457 PPP1R15AO75807 674 aaPredicted RBP7.46□□□□□ -1.22
RNU2-28P-201ENST00000410457 SALL2Q9Y467 1007 aaPredicted RBP7.46□□□□□ -1.22
RNU2-28P-201ENST00000410457 ANKK1Q8NFD2 765 aa7.45□□□□□ -1.22
RNU2-28P-201ENST00000410457 SYMPKQ92797 1274 aaKnown RBP7.45□□□□□ -1.22
RNU2-28P-201ENST00000410457 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
RNU2-28P-201ENST00000410457 SLC27A5Q9Y2P5 690 aa7.45□□□□□ -1.22
RNU2-28P-201ENST00000410457 TRIM26Q12899 539 aaPredicted RBP7.44□□□□□ -1.22
RNU2-28P-201ENST00000410457 SOWAHBA6NEL2 793 aa7.43□□□□□ -1.22
RNU2-28P-201ENST00000410457 SOX11P35716 441 aa7.43□□□□□ -1.22
RNU2-28P-201ENST00000410457 PUS10Q3MIT2 529 aaKnown RBP7.43□□□□□ -1.22
RNU2-28P-201ENST00000410457 PNMA1Q8ND90 353 aa7.43□□□□□ -1.22
RNU2-28P-201ENST00000410457 ADAMTS19Q8TE59 1207 aa7.43□□□□□ -1.22
RNU2-28P-201ENST00000410457 TRAIPQ9BWF2 469 aa7.43□□□□□ -1.22
RNU2-28P-201ENST00000410457 PER1O15534 1290 aaPredicted RBP7.42□□□□□ -1.22
RNU2-28P-201ENST00000410457 HDGFL1Q5TGJ6 251 aa7.42□□□□□ -1.22
RNU2-28P-201ENST00000410457 LYPD8Q6UX82 237 aa7.42□□□□□ -1.22
RNU2-28P-201ENST00000410457 EPS8L1Q8TE68 723 aa7.42□□□□□ -1.22
RNU2-28P-201ENST00000410457 GOLGA8CPA6NN73 597 aa7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 PPP4CP60510 307 aa7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 NR6A1Q15406 480 aa7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 IFFO2Q5TF58 517 aa7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 STAC3Q96MF2 364 aa7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 ALG2Q9H553 416 aa7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 TSR3Q9UJK0 312 aaKnown RBP7.41□□□□□ -1.22
RNU2-28P-201ENST00000410457 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
RNU2-28P-201ENST00000410457 BRICD5Q6PL45 260 aa7.4□□□□□ -1.22
RNU2-28P-201ENST00000410457 RNF19BQ6ZMZ0 732 aa7.4□□□□□ -1.22
RNU2-28P-201ENST00000410457 HPS5Q9UPZ3 1129 aa7.4□□□□□ -1.22
RNU2-28P-201ENST00000410457 NR1I2O75469 434 aa7.39□□□□□ -1.23
RNU2-28P-201ENST00000410457 APLP1P51693 650 aa7.39□□□□□ -1.23
RNU2-28P-201ENST00000410457 BLOC1S3Q6QNY0 202 aa7.39□□□□□ -1.23
RNU2-28P-201ENST00000410457 THAP11Q96EK4 314 aa7.39□□□□□ -1.23
RNU2-28P-201ENST00000410457 ZBTB7CA1YPR0 619 aa7.38□□□□□ -1.23
RNU2-28P-201ENST00000410457 FMNL1O95466 1100 aaPredicted RBP7.38□□□□□ -1.23
RNU2-28P-201ENST00000410457 SCUBE3Q8IX30 993 aa7.38□□□□□ -1.23
RNU2-28P-201ENST00000410457 RETREG2Q8NC44 543 aa7.38□□□□□ -1.23
RNU2-28P-201ENST00000410457 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
RNU2-28P-201ENST00000410457 PCDHB3Q9Y5E6 796 aa7.38□□□□□ -1.23
RNU2-28P-201ENST00000410457 ACIN1Q9UKV3 1341 aaKnown RBP7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 ZC3H4Q9UPT8 1303 aaKnown RBP7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 BCAMP50895 628 aa7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 PDE4CQ08493 712 aa7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 PTPRNQ16849 979 aa7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 CFAP70Q5T0N1 1121 aa7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 KCTD17Q8N5Z5 321 aa7.37□□□□□ -1.23
RNU2-28P-201ENST00000410457 WNT2BQ93097 391 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms