RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 POGKQ9P215 609 aa25.79■■□□□ 1.72
PAX3-208ENST00000409828 PLEKHH1Q9ULM0 1364 aa25.79■■□□□ 1.72
PAX3-208ENST00000409828 CDC42BPGQ6DT37 1551 aa25.78■■□□□ 1.72
PAX3-208ENST00000409828 CARD11Q9BXL7 1154 aa25.78■■□□□ 1.72
PAX3-208ENST00000409828 EIF3AQ14152 1382 aaKnown RBP25.78■■□□□ 1.72
PAX3-208ENST00000409828 ADGRB2O60241 1585 aa25.78■■□□□ 1.72
PAX3-208ENST00000409828 ATF3P18847 181 aa25.75■■□□□ 1.71
PAX3-208ENST00000409828 UBAP1LF5GYI3 381 aa25.74■■□□□ 1.71
PAX3-208ENST00000409828 FBXO41Q8TF61 875 aa25.74■■□□□ 1.71
PAX3-208ENST00000409828 CENPJQ9HC77 1338 aaPredicted RBP25.72■■□□□ 1.71
PAX3-208ENST00000409828 QRICH2Q9H0J4 1663 aa25.7■■□□□ 1.7
PAX3-208ENST00000409828 SBNO2Q9Y2G9 1366 aa25.69■■□□□ 1.7
PAX3-208ENST00000409828 FMN2Q9NZ56 1722 aa25.69■■□□□ 1.7
PAX3-208ENST00000409828 SLAIN2Q9P270 581 aa25.69■■□□□ 1.7
PAX3-208ENST00000409828 MST1RQ04912 1400 aa25.68■■□□□ 1.7
PAX3-208ENST00000409828 SAFB2Q14151 953 aaKnown RBP eCLIP25.66■■□□□ 1.7
PAX3-208ENST00000409828 SLC24A1O60721 1099 aa25.65■■□□□ 1.7
PAX3-208ENST00000409828 MINK1Q8N4C8 1332 aaPredicted RBP25.63■■□□□ 1.69
PAX3-208ENST00000409828 WASLO00401 505 aaPredicted RBP25.63■■□□□ 1.69
PAX3-208ENST00000409828 USP47Q96K76 1375 aa25.63■■□□□ 1.69
PAX3-208ENST00000409828 ANKARQ7Z5J8 1434 aa25.63■■□□□ 1.69
PAX3-208ENST00000409828 C1orf167Q5SNV9 1468 aa25.62■■□□□ 1.69
PAX3-208ENST00000409828 ROBO1Q9Y6N7 1651 aa25.61■■□□□ 1.69
PAX3-208ENST00000409828 TULP4Q9NRJ4 1543 aa25.59■■□□□ 1.69
PAX3-208ENST00000409828 HIRIP3Q9BW71 556 aaPredicted RBP25.58■■□□□ 1.69
PAX3-208ENST00000409828 USP32Q8NFA0 1604 aa25.56■■□□□ 1.68
PAX3-208ENST00000409828 ST20-MTHFSA0A0A6YYL1 179 aa25.56■■□□□ 1.68
PAX3-208ENST00000409828 PIP4K2BP78356 416 aa25.56■■□□□ 1.68
PAX3-208ENST00000409828 EVC2Q86UK5 1308 aa25.56■■□□□ 1.68
PAX3-208ENST00000409828 RGPD8O14715 1765 aaPredicted RBP25.56■■□□□ 1.68
PAX3-208ENST00000409828 ZEB1P37275 1124 aaPredicted RBP25.55■■□□□ 1.68
PAX3-208ENST00000409828 CDK19Q9BWU1 502 aa25.55■■□□□ 1.68
PAX3-208ENST00000409828 ITSN1Q15811 1721 aa25.54■■□□□ 1.68
PAX3-208ENST00000409828 BRINP3Q76B58 766 aa25.54■■□□□ 1.68
PAX3-208ENST00000409828 TESK2Q96S53 571 aa25.54■■□□□ 1.68
PAX3-208ENST00000409828 KIF1AQ12756 1690 aa25.54■■□□□ 1.68
PAX3-208ENST00000409828 EIF4G2P78344 907 aaKnown RBP eCLIP25.53■■□□□ 1.68
PAX3-208ENST00000409828 PUS7Q96PZ0 661 aaKnown RBP25.53■■□□□ 1.68
PAX3-208ENST00000409828 ATP7BP35670 1465 aa25.52■■□□□ 1.68
PAX3-208ENST00000409828 NHSL1Q5SYE7 1610 aa25.52■■□□□ 1.68
PAX3-208ENST00000409828 AHDC1Q5TGY3 1603 aaPredicted RBP25.52■■□□□ 1.68
PAX3-208ENST00000409828 SCAF1Q9H7N4 1312 aaKnown RBP25.51■■□□□ 1.67
PAX3-208ENST00000409828 TOPAZ1Q8N9V7 1692 aa25.49■■□□□ 1.67
PAX3-208ENST00000409828 PRR36Q9H6K5 1346 aa25.49■■□□□ 1.67
PAX3-208ENST00000409828 ESCO1Q5FWF5 840 aa25.49■■□□□ 1.67
PAX3-208ENST00000409828 NUDT16Q96DE0 195 aaKnown RBP25.49■■□□□ 1.67
PAX3-208ENST00000409828 ORAI2Q96SN7 254 aa25.49■■□□□ 1.67
PAX3-208ENST00000409828 CCDC61Q9Y6R9 512 aa25.48■■□□□ 1.67
PAX3-208ENST00000409828 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
PAX3-208ENST00000409828 NUTM2FA1L443 756 aa25.46■■□□□ 1.67
PAX3-208ENST00000409828 ATAD2Q6PL18 1390 aa25.45■■□□□ 1.67
PAX3-208ENST00000409828 PHF8Q9UPP1 1060 aa25.45■■□□□ 1.66
PAX3-208ENST00000409828 PHLPP1O60346 1717 aa25.44■■□□□ 1.66
PAX3-208ENST00000409828 TMF1P82094 1093 aa25.44■■□□□ 1.66
PAX3-208ENST00000409828 ILDR1Q86SU0 546 aaPredicted RBP25.44■■□□□ 1.66
PAX3-208ENST00000409828 NPHP3Q7Z494 1330 aa25.43■■□□□ 1.66
PAX3-208ENST00000409828 HSPA5P11021 654 aaKnown RBP25.43■■□□□ 1.66
PAX3-208ENST00000409828 CABP2Q9NPB3 220 aa25.43■■□□□ 1.66
PAX3-208ENST00000409828 PLEKHG3A1L390 1219 aa25.42■■□□□ 1.66
PAX3-208ENST00000409828 CDCA8Q53HL2 280 aa25.42■■□□□ 1.66
PAX3-208ENST00000409828 COL16A1Q07092 1604 aaPredicted RBP25.41■■□□□ 1.66
PAX3-208ENST00000409828 HSPA1LP34931 641 aa25.4■■□□□ 1.66
PAX3-208ENST00000409828 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
PAX3-208ENST00000409828 POLR3AO14802 1390 aaPredicted RBP25.39■■□□□ 1.65
PAX3-208ENST00000409828 PPIP5K1Q6PFW1 1433 aa25.38■■□□□ 1.65
PAX3-208ENST00000409828 DISP3Q9P2K9 1392 aa25.37■■□□□ 1.65
PAX3-208ENST00000409828 NINLQ9Y2I6 1382 aa25.37■■□□□ 1.65
PAX3-208ENST00000409828 FOXO3O43524 673 aa25.37■■□□□ 1.65
PAX3-208ENST00000409828 PXDNQ92626 1479 aa25.36■■□□□ 1.65
PAX3-208ENST00000409828 PMFBP1Q8TBY8 1022 aa25.34■■□□□ 1.65
PAX3-208ENST00000409828 LRRC59Q96AG4 307 aaKnown RBP25.34■■□□□ 1.65
PAX3-208ENST00000409828 BRD4O60885 1362 aaPredicted RBP25.33■■□□□ 1.65
PAX3-208ENST00000409828 PSME1Q06323 249 aa25.33■■□□□ 1.65
PAX3-208ENST00000409828 NGDNQ8NEJ9 315 aaKnown RBP25.33■■□□□ 1.65
PAX3-208ENST00000409828 CABP1Q9NZU7 370 aa25.33■■□□□ 1.65
PAX3-208ENST00000409828 ACEP12821 1306 aa25.32■■□□□ 1.64
PAX3-208ENST00000409828 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
PAX3-208ENST00000409828 AKAP12Q02952 1782 aa25.31■■□□□ 1.64
PAX3-208ENST00000409828 KRT28Q7Z3Y7 464 aa25.3■■□□□ 1.64
PAX3-208ENST00000409828 DDX17Q92841 729 aaKnown RBP25.3■■□□□ 1.64
PAX3-208ENST00000409828 ZNF692Q9BU19 519 aaPredicted RBP25.3■■□□□ 1.64
PAX3-208ENST00000409828 JCADQ9P266 1359 aa25.3■■□□□ 1.64
PAX3-208ENST00000409828 SHPRHQ149N8 1683 aa25.29■■□□□ 1.64
PAX3-208ENST00000409828 TRPM3Q9HCF6 1732 aaPredicted RBP25.29■■□□□ 1.64
PAX3-208ENST00000409828 CPSF1Q10570 1443 aaKnown RBP25.29■■□□□ 1.64
PAX3-208ENST00000409828 SPATA31A3Q5VYP0 1347 aa25.25■■□□□ 1.63
PAX3-208ENST00000409828 MON2Q7Z3U7 1717 aa25.25■■□□□ 1.63
PAX3-208ENST00000409828 CD163L1Q9NR16 1453 aa25.24■■□□□ 1.63
PAX3-208ENST00000409828 USP6P35125 1406 aa25.24■■□□□ 1.63
PAX3-208ENST00000409828 TNS3Q68CZ2 1445 aa25.24■■□□□ 1.63
PAX3-208ENST00000409828 TERF2IPQ9NYB0 399 aa25.24■■□□□ 1.63
PAX3-208ENST00000409828 MYOM1P52179 1685 aa25.23■■□□□ 1.63
PAX3-208ENST00000409828 ALS2Q96Q42 1657 aa25.23■■□□□ 1.63
PAX3-208ENST00000409828 COL22A1Q8NFW1 1626 aaPredicted RBP25.23■■□□□ 1.63
PAX3-208ENST00000409828 TMC1Q8TDI8 760 aa25.23■■□□□ 1.63
PAX3-208ENST00000409828 SLC12A5Q9H2X9 1139 aa25.23■■□□□ 1.63
PAX3-208ENST00000409828 SSH2Q76I76 1423 aa25.22■■□□□ 1.63
PAX3-208ENST00000409828 ARHGEF10O15013 1369 aa25.22■■□□□ 1.63
PAX3-208ENST00000409828 XPCQ01831 940 aaPredicted RBP25.22■■□□□ 1.63
PAX3-208ENST00000409828 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms