RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MAST1Q9Y2H9 1570 aa17.12■□□□□ 0.33
COL6A2-204ENST00000409416 FANCAO15360 1455 aa17.12■□□□□ 0.33
COL6A2-204ENST00000409416 MYO5CQ9NQX4 1742 aa17.12■□□□□ 0.33
COL6A2-204ENST00000409416 ZRANB1Q9UGI0 708 aa17.12■□□□□ 0.33
COL6A2-204ENST00000409416 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
COL6A2-204ENST00000409416 MFAP1P55081 439 aaKnown RBP17.11■□□□□ 0.33
COL6A2-204ENST00000409416 C8orf34Q49A92 452 aa17.11■□□□□ 0.33
COL6A2-204ENST00000409416 GZF1Q9H116 711 aaPredicted RBP17.11■□□□□ 0.33
COL6A2-204ENST00000409416 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
COL6A2-204ENST00000409416 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
COL6A2-204ENST00000409416 UNC13BO14795 1591 aa17.1■□□□□ 0.33
COL6A2-204ENST00000409416 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
COL6A2-204ENST00000409416 RIPK4P57078 832 aa17.09■□□□□ 0.33
COL6A2-204ENST00000409416 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
COL6A2-204ENST00000409416 ABCC2Q92887 1545 aa17.09■□□□□ 0.33
COL6A2-204ENST00000409416 CEBPAP49715 358 aaPredicted RBP17.08■□□□□ 0.33
COL6A2-204ENST00000409416 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.33
COL6A2-204ENST00000409416 CHD1O14646 1710 aa17.08■□□□□ 0.33
COL6A2-204ENST00000409416 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
COL6A2-204ENST00000409416 IQGAP3Q86VI3 1631 aa17.08■□□□□ 0.32
COL6A2-204ENST00000409416 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
COL6A2-204ENST00000409416 VGFO15240 615 aaPredicted RBP17.08■□□□□ 0.32
COL6A2-204ENST00000409416 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
COL6A2-204ENST00000409416 SLC26A8Q96RN1 970 aa17.08■□□□□ 0.32
COL6A2-204ENST00000409416 BRPF3Q9ULD4 1205 aa17.08■□□□□ 0.32
COL6A2-204ENST00000409416 USP35Q9P2H5 1018 aa17.07■□□□□ 0.32
COL6A2-204ENST00000409416 ATP10AO60312 1499 aa17.07■□□□□ 0.32
COL6A2-204ENST00000409416 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
COL6A2-204ENST00000409416 HSP90AA1P07900 732 aaKnown RBP17.06■□□□□ 0.32
COL6A2-204ENST00000409416 EVC2Q86UK5 1308 aa17.06■□□□□ 0.32
COL6A2-204ENST00000409416 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
COL6A2-204ENST00000409416 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
COL6A2-204ENST00000409416 GSE1Q14687 1217 aa17.05■□□□□ 0.32
COL6A2-204ENST00000409416 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
COL6A2-204ENST00000409416 UBE2Q2Q8WVN8 375 aa17.05■□□□□ 0.32
COL6A2-204ENST00000409416 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
COL6A2-204ENST00000409416 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
COL6A2-204ENST00000409416 CD109Q6YHK3 1445 aa17.03■□□□□ 0.32
COL6A2-204ENST00000409416 RLBP1P12271 317 aa17.03■□□□□ 0.32
COL6A2-204ENST00000409416 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
COL6A2-204ENST00000409416 SEC24BO95487 1268 aa17.02■□□□□ 0.32
COL6A2-204ENST00000409416 RUNDC1Q96C34 613 aa17.02■□□□□ 0.32
COL6A2-204ENST00000409416 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.32
COL6A2-204ENST00000409416 LNPKQ9C0E8 428 aa17.02■□□□□ 0.31
COL6A2-204ENST00000409416 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
COL6A2-204ENST00000409416 PRKAR2BP31323 418 aa17.01■□□□□ 0.31
COL6A2-204ENST00000409416 PIK3C2GO75747 1445 aa17.01■□□□□ 0.31
COL6A2-204ENST00000409416 EMILIN1Q9Y6C2 1016 aa17.01■□□□□ 0.31
COL6A2-204ENST00000409416 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
COL6A2-204ENST00000409416 TERF2IPQ9NYB0 399 aa16.99■□□□□ 0.31
COL6A2-204ENST00000409416 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
COL6A2-204ENST00000409416 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
COL6A2-204ENST00000409416 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
COL6A2-204ENST00000409416 NME9Q86XW9 330 aa16.99■□□□□ 0.31
COL6A2-204ENST00000409416 ABCC1P33527 1531 aa16.98■□□□□ 0.31
COL6A2-204ENST00000409416 CLTCL1P53675 1640 aa16.98■□□□□ 0.31
COL6A2-204ENST00000409416 PKNOX2Q96KN3 472 aa16.98■□□□□ 0.31
COL6A2-204ENST00000409416 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
COL6A2-204ENST00000409416 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
COL6A2-204ENST00000409416 INSRP06213 1382 aa16.97■□□□□ 0.31
COL6A2-204ENST00000409416 BECN1Q14457 450 aa16.97■□□□□ 0.31
COL6A2-204ENST00000409416 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
COL6A2-204ENST00000409416 PCDHB15Q9Y5E8 787 aa16.96■□□□□ 0.31
COL6A2-204ENST00000409416 ZCCHC11Q5TAX3 1644 aaKnown RBP16.96■□□□□ 0.31
COL6A2-204ENST00000409416 TRMT2AQ8IZ69 625 aaKnown RBP16.96■□□□□ 0.31
COL6A2-204ENST00000409416 ERVK-7P63135 1459 aa16.95■□□□□ 0.3
COL6A2-204ENST00000409416 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
COL6A2-204ENST00000409416 NOB1Q9ULX3 412 aaKnown RBP16.95■□□□□ 0.3
COL6A2-204ENST00000409416 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
COL6A2-204ENST00000409416 LAMC1P11047 1609 aa16.95■□□□□ 0.3
COL6A2-204ENST00000409416 TRPM2O94759 1503 aa16.95■□□□□ 0.3
COL6A2-204ENST00000409416 SYNMO15061 1565 aa16.94■□□□□ 0.3
COL6A2-204ENST00000409416 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
COL6A2-204ENST00000409416 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
COL6A2-204ENST00000409416 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
COL6A2-204ENST00000409416 DZIP1LQ8IYY4 767 aaKnown RBP16.92■□□□□ 0.3
COL6A2-204ENST00000409416 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
COL6A2-204ENST00000409416 FOXD4L5Q5VV16 416 aaPredicted RBP16.92■□□□□ 0.3
COL6A2-204ENST00000409416 ZKSCAN2Q63HK3 967 aa16.92■□□□□ 0.3
COL6A2-204ENST00000409416 FOXD4L4Q8WXT5 416 aaPredicted RBP16.92■□□□□ 0.3
COL6A2-204ENST00000409416 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
COL6A2-204ENST00000409416 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
COL6A2-204ENST00000409416 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
COL6A2-204ENST00000409416 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
COL6A2-204ENST00000409416 C14orf93Q9H972 538 aaKnown RBP16.91■□□□□ 0.3
COL6A2-204ENST00000409416 PTPRTO14522 1441 aa16.91■□□□□ 0.3
COL6A2-204ENST00000409416 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
COL6A2-204ENST00000409416 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
COL6A2-204ENST00000409416 RNF17Q9BXT8 1623 aaKnown RBP16.91■□□□□ 0.3
COL6A2-204ENST00000409416 A0A0G2JS52 829 aa16.9■□□□□ 0.3
COL6A2-204ENST00000409416 SPHKAPQ2M3C7 1700 aa16.89■□□□□ 0.3
COL6A2-204ENST00000409416 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
COL6A2-204ENST00000409416 RTEL1-TNFRSF6BF6WH68 1400 aa16.89■□□□□ 0.29
COL6A2-204ENST00000409416 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
COL6A2-204ENST00000409416 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
COL6A2-204ENST00000409416 FOXD4L6Q3SYB3 417 aaPredicted RBP16.89■□□□□ 0.29
COL6A2-204ENST00000409416 FOXD4L3Q6VB84 417 aaPredicted RBP16.89■□□□□ 0.29
COL6A2-204ENST00000409416 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
COL6A2-204ENST00000409416 FYB1O15117 783 aa16.88■□□□□ 0.29
COL6A2-204ENST00000409416 TMEM57Q8N5G2 664 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms