RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
POLR1A-202ENST00000409024 TMEM132EQ6IEE7 984 aa13.43□□□□□ -0.26
POLR1A-202ENST00000409024 PRKRIP1Q9H875 184 aaPredicted RBP13.43□□□□□ -0.26
POLR1A-202ENST00000409024 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
POLR1A-202ENST00000409024 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
POLR1A-202ENST00000409024 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
POLR1A-202ENST00000409024 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
POLR1A-202ENST00000409024 RALBP1Q15311 655 aa13.41□□□□□ -0.26
POLR1A-202ENST00000409024 ZNF772Q68DY9 489 aaPredicted RBP13.41□□□□□ -0.26
POLR1A-202ENST00000409024 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
POLR1A-202ENST00000409024 NRXN3Q9Y4C0 1643 aa13.4□□□□□ -0.26
POLR1A-202ENST00000409024 PER1O15534 1290 aaPredicted RBP13.4□□□□□ -0.26
POLR1A-202ENST00000409024 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
POLR1A-202ENST00000409024 NINLQ9Y2I6 1382 aa13.4□□□□□ -0.26
POLR1A-202ENST00000409024 DIP2AQ14689 1571 aa13.4□□□□□ -0.26
POLR1A-202ENST00000409024 TECPR2O15040 1411 aa13.39□□□□□ -0.27
POLR1A-202ENST00000409024 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
POLR1A-202ENST00000409024 TBX22Q9Y458 520 aa13.39□□□□□ -0.27
POLR1A-202ENST00000409024 JCADQ9P266 1359 aa13.39□□□□□ -0.27
POLR1A-202ENST00000409024 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
POLR1A-202ENST00000409024 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
POLR1A-202ENST00000409024 TMEM94Q12767 1356 aa13.37□□□□□ -0.27
POLR1A-202ENST00000409024 LTKP29376 864 aa13.37□□□□□ -0.27
POLR1A-202ENST00000409024 PANK3Q9H999 370 aa13.37□□□□□ -0.27
POLR1A-202ENST00000409024 POGKQ9P215 609 aa13.37□□□□□ -0.27
POLR1A-202ENST00000409024 ADAMTS13Q76LX8 1427 aa13.37□□□□□ -0.27
POLR1A-202ENST00000409024 PIK3R4Q99570 1358 aa13.36□□□□□ -0.27
POLR1A-202ENST00000409024 RXRBP28702 533 aa13.36□□□□□ -0.27
POLR1A-202ENST00000409024 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
POLR1A-202ENST00000409024 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
POLR1A-202ENST00000409024 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
POLR1A-202ENST00000409024 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 METP08581 1390 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 KCNA6P17658 529 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 BCANQ96GW7 911 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 PRAM1Q96QH2 718 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 STK26Q9P289 416 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 KNSTRNQ9Y448 316 aa13.34□□□□□ -0.27
POLR1A-202ENST00000409024 SLAIN2Q9P270 581 aa13.33□□□□□ -0.28
POLR1A-202ENST00000409024 MYOM1P52179 1685 aa13.33□□□□□ -0.28
POLR1A-202ENST00000409024 SPATA31A6Q5VVP1 1343 aa13.33□□□□□ -0.28
POLR1A-202ENST00000409024 MYBBP1AQ9BQG0 1328 aaKnown RBP13.33□□□□□ -0.28
POLR1A-202ENST00000409024 PARD3Q8TEW0 1356 aa13.32□□□□□ -0.28
POLR1A-202ENST00000409024 TULP4Q9NRJ4 1543 aa13.32□□□□□ -0.28
POLR1A-202ENST00000409024 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
POLR1A-202ENST00000409024 RBM33Q96EV2 1170 aaKnown RBP13.3□□□□□ -0.28
POLR1A-202ENST00000409024 AMER1Q5JTC6 1135 aaPredicted RBP13.29□□□□□ -0.28
POLR1A-202ENST00000409024 MSH6P52701 1360 aa13.29□□□□□ -0.28
POLR1A-202ENST00000409024 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
POLR1A-202ENST00000409024 PTCH1Q13635 1447 aa13.29□□□□□ -0.28
POLR1A-202ENST00000409024 NLRP13Q86W25 1043 aa13.28□□□□□ -0.28
POLR1A-202ENST00000409024 CDK12Q9NYV4 1490 aaPredicted RBP13.28□□□□□ -0.28
POLR1A-202ENST00000409024 PHLPP1O60346 1717 aa13.27□□□□□ -0.28
POLR1A-202ENST00000409024 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
POLR1A-202ENST00000409024 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
POLR1A-202ENST00000409024 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
POLR1A-202ENST00000409024 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.29
POLR1A-202ENST00000409024 NSD2O96028 1365 aa13.27□□□□□ -0.29
POLR1A-202ENST00000409024 ADGRB2O60241 1585 aa13.27□□□□□ -0.29
POLR1A-202ENST00000409024 USP32Q8NFA0 1604 aa13.27□□□□□ -0.29
POLR1A-202ENST00000409024 WASLO00401 505 aaPredicted RBP13.26□□□□□ -0.29
POLR1A-202ENST00000409024 TERF2IPQ9NYB0 399 aa13.26□□□□□ -0.29
POLR1A-202ENST00000409024 LRP6O75581 1613 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 INSRP06213 1382 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 TMC1Q8TDI8 760 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
POLR1A-202ENST00000409024 PTPRUQ92729 1446 aa13.24□□□□□ -0.29
POLR1A-202ENST00000409024 CGNL1Q0VF96 1302 aa13.24□□□□□ -0.29
POLR1A-202ENST00000409024 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
POLR1A-202ENST00000409024 YTHDC1Q96MU7 727 aaKnown RBP13.24□□□□□ -0.29
POLR1A-202ENST00000409024 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
POLR1A-202ENST00000409024 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
POLR1A-202ENST00000409024 ATP7BP35670 1465 aa13.23□□□□□ -0.29
POLR1A-202ENST00000409024 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
POLR1A-202ENST00000409024 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
POLR1A-202ENST00000409024 XRN1Q8IZH2 1706 aaKnown RBP13.23□□□□□ -0.29
POLR1A-202ENST00000409024 HDGFL2Q7Z4V5 671 aaPredicted RBP13.23□□□□□ -0.29
POLR1A-202ENST00000409024 NUTM2BA6NNL0 878 aaPredicted RBP13.22□□□□□ -0.29
POLR1A-202ENST00000409024 NUTM2EB1AL46 878 aaPredicted RBP13.22□□□□□ -0.29
POLR1A-202ENST00000409024 NUTM2AQ8IVF1 878 aaPredicted RBP13.22□□□□□ -0.29
POLR1A-202ENST00000409024 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
POLR1A-202ENST00000409024 CC2D1BQ5T0F9 858 aaKnown RBP13.21□□□□□ -0.29
POLR1A-202ENST00000409024 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
POLR1A-202ENST00000409024 NKTRP30414 1462 aaKnown RBP13.21□□□□□ -0.3
POLR1A-202ENST00000409024 COL16A1Q07092 1604 aaPredicted RBP13.21□□□□□ -0.3
POLR1A-202ENST00000409024 AFF2P51816 1311 aa13.2□□□□□ -0.3
POLR1A-202ENST00000409024 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
POLR1A-202ENST00000409024 PNISRQ8TF01 805 aaKnown RBP13.2□□□□□ -0.3
POLR1A-202ENST00000409024 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
POLR1A-202ENST00000409024 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
POLR1A-202ENST00000409024 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
POLR1A-202ENST00000409024 QTRT2Q9H974 415 aaKnown RBP13.19□□□□□ -0.3
POLR1A-202ENST00000409024 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
POLR1A-202ENST00000409024 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
POLR1A-202ENST00000409024 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms