RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 KDM2AQ9Y2K7 1162 aa26.95■■□□□ 1.9
PTPN18-203ENST00000409022 MEX3CQ5U5Q3 659 aaKnown RBP26.94■■□□□ 1.9
PTPN18-203ENST00000409022 CDC42BPGQ6DT37 1551 aa26.93■■□□□ 1.9
PTPN18-203ENST00000409022 KNDC1Q76NI1 1749 aa26.92■■□□□ 1.9
PTPN18-203ENST00000409022 ORAI2Q96SN7 254 aa26.91■■□□□ 1.9
PTPN18-203ENST00000409022 ESCO1Q5FWF5 840 aa26.9■■□□□ 1.9
PTPN18-203ENST00000409022 POGKQ9P215 609 aa26.89■■□□□ 1.9
PTPN18-203ENST00000409022 NHSL1Q5SYE7 1610 aa26.89■■□□□ 1.9
PTPN18-203ENST00000409022 PLEKHH1Q9ULM0 1364 aa26.88■■□□□ 1.89
PTPN18-203ENST00000409022 RGS17Q9UGC6 210 aaPredicted RBP26.88■■□□□ 1.89
PTPN18-203ENST00000409022 SHPRHQ149N8 1683 aa26.87■■□□□ 1.89
PTPN18-203ENST00000409022 NPHP3Q7Z494 1330 aa26.87■■□□□ 1.89
PTPN18-203ENST00000409022 DDX17Q92841 729 aaKnown RBP26.86■■□□□ 1.89
PTPN18-203ENST00000409022 PRAM1Q96QH2 718 aa26.86■■□□□ 1.89
PTPN18-203ENST00000409022 SOS2Q07890 1332 aaPredicted RBP26.85■■□□□ 1.89
PTPN18-203ENST00000409022 NUTM2BA6NNL0 878 aaPredicted RBP26.84■■□□□ 1.89
PTPN18-203ENST00000409022 NUTM2EB1AL46 878 aaPredicted RBP26.84■■□□□ 1.89
PTPN18-203ENST00000409022 NUTM2AQ8IVF1 878 aaPredicted RBP26.84■■□□□ 1.89
PTPN18-203ENST00000409022 DLC1Q96QB1 1528 aa26.83■■□□□ 1.89
PTPN18-203ENST00000409022 ZNF772Q68DY9 489 aaPredicted RBP26.82■■□□□ 1.88
PTPN18-203ENST00000409022 NUTM2FA1L443 756 aa26.81■■□□□ 1.88
PTPN18-203ENST00000409022 TRAK1Q9UPV9 953 aa26.81■■□□□ 1.88
PTPN18-203ENST00000409022 PNPLA6Q8IY17 1366 aa26.81■■□□□ 1.88
PTPN18-203ENST00000409022 LRP6O75581 1613 aa26.8■■□□□ 1.88
PTPN18-203ENST00000409022 SAFB2Q14151 953 aaKnown RBP eCLIP26.8■■□□□ 1.88
PTPN18-203ENST00000409022 ADGRB1O14514 1584 aa26.8■■□□□ 1.88
PTPN18-203ENST00000409022 FOXO3O43524 673 aa26.77■■□□□ 1.88
PTPN18-203ENST00000409022 POTEAQ6S8J7 498 aa26.77■■□□□ 1.88
PTPN18-203ENST00000409022 EIF3AQ14152 1382 aaKnown RBP26.75■■□□□ 1.87
PTPN18-203ENST00000409022 FMN2Q9NZ56 1722 aa26.72■■□□□ 1.87
PTPN18-203ENST00000409022 PHF8Q9UPP1 1060 aa26.71■■□□□ 1.87
PTPN18-203ENST00000409022 PSME1Q06323 249 aa26.7■■□□□ 1.86
PTPN18-203ENST00000409022 ANKARQ7Z5J8 1434 aa26.7■■□□□ 1.86
PTPN18-203ENST00000409022 C8orf37Q96NL8 207 aa26.69■■□□□ 1.86
PTPN18-203ENST00000409022 PXDNQ92626 1479 aa26.68■■□□□ 1.86
PTPN18-203ENST00000409022 MINK1Q8N4C8 1332 aaPredicted RBP26.68■■□□□ 1.86
PTPN18-203ENST00000409022 XPCQ01831 940 aaPredicted RBP26.68■■□□□ 1.86
PTPN18-203ENST00000409022 KIF1AQ12756 1690 aa26.68■■□□□ 1.86
PTPN18-203ENST00000409022 AFF2P51816 1311 aa26.67■■□□□ 1.86
PTPN18-203ENST00000409022 ADAMTS2O95450 1211 aa26.67■■□□□ 1.86
PTPN18-203ENST00000409022 TRIM26Q12899 539 aaPredicted RBP26.67■■□□□ 1.86
PTPN18-203ENST00000409022 KRT28Q7Z3Y7 464 aa26.66■■□□□ 1.86
PTPN18-203ENST00000409022 NGLY1Q96IV0 654 aa26.66■■□□□ 1.86
PTPN18-203ENST00000409022 HIRIP3Q9BW71 556 aaPredicted RBP26.66■■□□□ 1.86
PTPN18-203ENST00000409022 ADGRB2O60241 1585 aa26.66■■□□□ 1.86
PTPN18-203ENST00000409022 WASLO00401 505 aaPredicted RBP26.65■■□□□ 1.86
PTPN18-203ENST00000409022 RXRBP28702 533 aa26.63■■□□□ 1.85
PTPN18-203ENST00000409022 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
PTPN18-203ENST00000409022 L3MBTL2Q969R5 705 aa26.62■■□□□ 1.85
PTPN18-203ENST00000409022 SPATA31A3Q5VYP0 1347 aa26.62■■□□□ 1.85
PTPN18-203ENST00000409022 KIAA1210Q9ULL0 1709 aa26.62■■□□□ 1.85
PTPN18-203ENST00000409022 SIN3AQ96ST3 1273 aa26.61■■□□□ 1.85
PTPN18-203ENST00000409022 COL22A1Q8NFW1 1626 aaPredicted RBP26.59■■□□□ 1.85
PTPN18-203ENST00000409022 PMFBP1Q8TBY8 1022 aa26.58■■□□□ 1.85
PTPN18-203ENST00000409022 TULP4Q9NRJ4 1543 aa26.58■■□□□ 1.85
PTPN18-203ENST00000409022 SBNO1A3KN83 1393 aa26.58■■□□□ 1.84
PTPN18-203ENST00000409022 GPRASP1Q5JY77 1395 aa26.58■■□□□ 1.84
PTPN18-203ENST00000409022 NBPF1Q3BBV0 1214 aa26.57■■□□□ 1.84
PTPN18-203ENST00000409022 HAP1P54257 671 aaPredicted RBP26.56■■□□□ 1.84
PTPN18-203ENST00000409022 QTRT2Q9H974 415 aaKnown RBP26.56■■□□□ 1.84
PTPN18-203ENST00000409022 ARHGEF10O15013 1369 aa26.56■■□□□ 1.84
PTPN18-203ENST00000409022 TNS3Q68CZ2 1445 aa26.56■■□□□ 1.84
PTPN18-203ENST00000409022 USP21Q9UK80 565 aa26.55■■□□□ 1.84
PTPN18-203ENST00000409022 LMOD2Q6P5Q4 547 aa26.54■■□□□ 1.84
PTPN18-203ENST00000409022 NGDNQ8NEJ9 315 aaKnown RBP26.54■■□□□ 1.84
PTPN18-203ENST00000409022 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
PTPN18-203ENST00000409022 RBM6P78332 1123 aaKnown RBP26.53■■□□□ 1.84
PTPN18-203ENST00000409022 FNBP4Q8N3X1 1017 aaPredicted RBP26.53■■□□□ 1.84
PTPN18-203ENST00000409022 PRR36Q9H6K5 1346 aa26.52■■□□□ 1.84
PTPN18-203ENST00000409022 CENPJQ9HC77 1338 aaPredicted RBP26.52■■□□□ 1.84
PTPN18-203ENST00000409022 TRPC5Q9UL62 973 aaPredicted RBP26.52■■□□□ 1.84
PTPN18-203ENST00000409022 NUDT16Q96DE0 195 aaKnown RBP26.51■■□□□ 1.83
PTPN18-203ENST00000409022 CDK19Q9BWU1 502 aa26.51■■□□□ 1.83
PTPN18-203ENST00000409022 CDK12Q9NYV4 1490 aaPredicted RBP26.5■■□□□ 1.83
PTPN18-203ENST00000409022 USP32Q8NFA0 1604 aa26.5■■□□□ 1.83
PTPN18-203ENST00000409022 ROCK2O75116 1388 aaKnown RBP26.47■■□□□ 1.83
PTPN18-203ENST00000409022 CCDC61Q9Y6R9 512 aa26.47■■□□□ 1.83
PTPN18-203ENST00000409022 RGPD8O14715 1765 aaPredicted RBP26.47■■□□□ 1.83
PTPN18-203ENST00000409022 TONSLQ96HA7 1378 aa26.46■■□□□ 1.83
PTPN18-203ENST00000409022 ATP7BP35670 1465 aa26.45■■□□□ 1.82
PTPN18-203ENST00000409022 SRPK2P78362 688 aaKnown RBP26.44■■□□□ 1.82
PTPN18-203ENST00000409022 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
PTPN18-203ENST00000409022 PLEKHG5O94827 1062 aa26.4■■□□□ 1.82
PTPN18-203ENST00000409022 CABLES1Q8TDN4 633 aa26.4■■□□□ 1.82
PTPN18-203ENST00000409022 ITSN1Q15811 1721 aa26.39■■□□□ 1.82
PTPN18-203ENST00000409022 PLEKHG3A1L390 1219 aa26.39■■□□□ 1.82
PTPN18-203ENST00000409022 UNC5CLQ8IV45 518 aa26.39■■□□□ 1.82
PTPN18-203ENST00000409022 ATRNO75882 1429 aa26.39■■□□□ 1.81
PTPN18-203ENST00000409022 EVC2Q86UK5 1308 aa26.38■■□□□ 1.81
PTPN18-203ENST00000409022 TRPM1Q7Z4N2 1603 aa26.37■■□□□ 1.81
PTPN18-203ENST00000409022 BCL9LQ86UU0 1499 aa26.36■■□□□ 1.81
PTPN18-203ENST00000409022 POLR3AO14802 1390 aaPredicted RBP26.36■■□□□ 1.81
PTPN18-203ENST00000409022 ACEP12821 1306 aa26.36■■□□□ 1.81
PTPN18-203ENST00000409022 RGS12O14924 1447 aa26.35■■□□□ 1.81
PTPN18-203ENST00000409022 NBPF8Q3BBV2 869 aa26.35■■□□□ 1.81
PTPN18-203ENST00000409022 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
PTPN18-203ENST00000409022 GJD4Q96KN9 370 aaPredicted RBP26.34■■□□□ 1.81
PTPN18-203ENST00000409022 CABP2Q9NPB3 220 aa26.34■■□□□ 1.81
PTPN18-203ENST00000409022 SLIT2O94813 1529 aa26.34■■□□□ 1.81
PTPN18-203ENST00000409022 CARD11Q9BXL7 1154 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms