RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
PCNX4-204ENST00000406949 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.04
PCNX4-204ENST00000406949 PIK3C2GO75747 1445 aa15.27■□□□□ 0.03
PCNX4-204ENST00000406949 MADDQ8WXG6 1647 aa15.27■□□□□ 0.03
PCNX4-204ENST00000406949 TSR2Q969E8 191 aaKnown RBP15.27■□□□□ 0.03
PCNX4-204ENST00000406949 UPF2Q9HAU5 1272 aaKnown RBP15.27■□□□□ 0.03
PCNX4-204ENST00000406949 NPATQ14207 1427 aa15.25■□□□□ 0.03
PCNX4-204ENST00000406949 RPGRIP1LQ68CZ1 1315 aa15.25■□□□□ 0.03
PCNX4-204ENST00000406949 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
PCNX4-204ENST00000406949 ERVK-7P63135 1459 aa15.25■□□□□ 0.03
PCNX4-204ENST00000406949 SOX12O15370 315 aa15.25■□□□□ 0.03
PCNX4-204ENST00000406949 SPHKAPQ2M3C7 1700 aa15.25■□□□□ 0.03
PCNX4-204ENST00000406949 ITPRIPQ8IWB1 547 aa15.24■□□□□ 0.03
PCNX4-204ENST00000406949 NUTM2FA1L443 756 aa15.24■□□□□ 0.03
PCNX4-204ENST00000406949 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
PCNX4-204ENST00000406949 NGEFQ8N5V2 710 aa15.23■□□□□ 0.03
PCNX4-204ENST00000406949 TET3O43151 1660 aa15.23■□□□□ 0.03
PCNX4-204ENST00000406949 SLC52A1Q9NWF4 448 aa15.22■□□□□ 0.03
PCNX4-204ENST00000406949 CABP1Q9NZU7 370 aa15.22■□□□□ 0.03
PCNX4-204ENST00000406949 TNNQ9UQP3 1299 aa15.21■□□□□ 0.03
PCNX4-204ENST00000406949 FBLN1P23142 703 aa15.21■□□□□ 0.02
PCNX4-204ENST00000406949 RIPK4P57078 832 aa15.21■□□□□ 0.02
PCNX4-204ENST00000406949 SYNMO15061 1565 aa15.21■□□□□ 0.02
PCNX4-204ENST00000406949 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
PCNX4-204ENST00000406949 ELL2O00472 640 aaPredicted RBP15.2■□□□□ 0.02
PCNX4-204ENST00000406949 KDM5AP29375 1690 aaKnown RBP15.2■□□□□ 0.02
PCNX4-204ENST00000406949 ZNF521Q96K83 1311 aa15.2■□□□□ 0.02
PCNX4-204ENST00000406949 IGHDP01880 384 aa15.2■□□□□ 0.02
PCNX4-204ENST00000406949 POGZQ7Z3K3 1410 aa15.2■□□□□ 0.02
PCNX4-204ENST00000406949 LAMC1P11047 1609 aa15.2■□□□□ 0.02
PCNX4-204ENST00000406949 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
PCNX4-204ENST00000406949 HMOX1P09601 288 aa15.2■□□□□ 0.02
PCNX4-204ENST00000406949 CDK19Q9BWU1 502 aa15.2■□□□□ 0.02
PCNX4-204ENST00000406949 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
PCNX4-204ENST00000406949 WAPLQ7Z5K2 1190 aa15.19■□□□□ 0.02
PCNX4-204ENST00000406949 RARSP54136 660 aaKnown RBP15.19■□□□□ 0.02
PCNX4-204ENST00000406949 EXOSC9Q06265 439 aaKnown RBP15.19■□□□□ 0.02
PCNX4-204ENST00000406949 PMFBP1Q8TBY8 1022 aa15.19■□□□□ 0.02
PCNX4-204ENST00000406949 ARAP3Q8WWN8 1544 aa15.18■□□□□ 0.02
PCNX4-204ENST00000406949 ZKSCAN2Q63HK3 967 aa15.18■□□□□ 0.02
PCNX4-204ENST00000406949 RWDD1Q9H446 243 aaPredicted RBP15.18■□□□□ 0.02
PCNX4-204ENST00000406949 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
PCNX4-204ENST00000406949 INSRP06213 1382 aa15.18■□□□□ 0.02
PCNX4-204ENST00000406949 SPRYD3Q8NCJ5 442 aa15.18■□□□□ 0.02
PCNX4-204ENST00000406949 SLKQ9H2G2 1235 aaPredicted RBP15.18■□□□□ 0.02
PCNX4-204ENST00000406949 POLR3AO14802 1390 aaPredicted RBP15.17■□□□□ 0.02
PCNX4-204ENST00000406949 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
PCNX4-204ENST00000406949 KIF1BO60333 1816 aa15.16■□□□□ 0.02
PCNX4-204ENST00000406949 MYOM2P54296 1465 aa15.16■□□□□ 0.02
PCNX4-204ENST00000406949 MAP3K4Q9Y6R4 1608 aa15.16■□□□□ 0.02
PCNX4-204ENST00000406949 DZIP1LQ8IYY4 767 aaKnown RBP15.16■□□□□ 0.02
PCNX4-204ENST00000406949 WDR63Q8IWG1 891 aa15.16■□□□□ 0.02
PCNX4-204ENST00000406949 INO80Q9ULG1 1556 aaPredicted RBP15.15■□□□□ 0.02
PCNX4-204ENST00000406949 ABCA9Q8IUA7 1624 aa15.15■□□□□ 0.02
PCNX4-204ENST00000406949 ABCA6Q8N139 1617 aa15.15■□□□□ 0.02
PCNX4-204ENST00000406949 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
PCNX4-204ENST00000406949 BECN1Q14457 450 aa15.15■□□□□ 0.02
PCNX4-204ENST00000406949 CEP152O94986 1710 aa15.15■□□□□ 0.02
PCNX4-204ENST00000406949 KDM2BQ8NHM5 1336 aa15.15■□□□□ 0.02
PCNX4-204ENST00000406949 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
PCNX4-204ENST00000406949 RLBP1P12271 317 aa15.14■□□□□ 0.01
PCNX4-204ENST00000406949 TXNDC2Q86VQ3 553 aa15.14■□□□□ 0.01
PCNX4-204ENST00000406949 IQGAP1P46940 1657 aa15.13■□□□□ 0.01
PCNX4-204ENST00000406949 TMPOP42166 694 aaKnown RBP15.13■□□□□ 0.01
PCNX4-204ENST00000406949 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
PCNX4-204ENST00000406949 PRKAR2BP31323 418 aa15.13■□□□□ 0.01
PCNX4-204ENST00000406949 YEATS2Q9ULM3 1422 aa15.12■□□□□ 0.01
PCNX4-204ENST00000406949 FYB1O15117 783 aa15.12■□□□□ 0.01
PCNX4-204ENST00000406949 PDZRN3Q9UPQ7 1066 aa15.12■□□□□ 0.01
PCNX4-204ENST00000406949 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
PCNX4-204ENST00000406949 PPRC1Q5VV67 1664 aaKnown RBP15.12■□□□□ 0.01
PCNX4-204ENST00000406949 C8orf34Q49A92 452 aa15.11■□□□□ 0.01
PCNX4-204ENST00000406949 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
PCNX4-204ENST00000406949 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
PCNX4-204ENST00000406949 SBNO2Q9Y2G9 1366 aa15.11■□□□□ 0.01
PCNX4-204ENST00000406949 MFAP1P55081 439 aaKnown RBP15.11■□□□□ 0.01
PCNX4-204ENST00000406949 ATAD2Q6PL18 1390 aa15.11■□□□□ 0.01
PCNX4-204ENST00000406949 IPO8O15397 1037 aaKnown RBP15.1■□□□□ 0.01
PCNX4-204ENST00000406949 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
PCNX4-204ENST00000406949 KIDINS220Q9ULH0 1771 aa15.09■□□□□ 0.01
PCNX4-204ENST00000406949 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
PCNX4-204ENST00000406949 NOB1Q9ULX3 412 aaKnown RBP15.09■□□□□ 0.01
PCNX4-204ENST00000406949 SSH1Q8WYL5 1049 aa15.09■□□□□ 0.01
PCNX4-204ENST00000406949 MLH3Q9UHC1 1453 aa15.08■□□□□ 0.01
PCNX4-204ENST00000406949 MVPQ14764 893 aaKnown RBP15.08■□□□□ 0
PCNX4-204ENST00000406949 NFKBIBQ15653 356 aa15.08■□□□□ 0
PCNX4-204ENST00000406949 COG3Q96JB2 828 aa15.08■□□□□ 0
PCNX4-204ENST00000406949 RRS1Q15050 365 aaKnown RBP15.07■□□□□ 0
PCNX4-204ENST00000406949 C14orf37Q86TY3 774 aa15.07■□□□□ 0
PCNX4-204ENST00000406949 EMILIN1Q9Y6C2 1016 aa15.07■□□□□ 0
PCNX4-204ENST00000406949 NME9Q86XW9 330 aa15.06■□□□□ 0
PCNX4-204ENST00000406949 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
PCNX4-204ENST00000406949 ABCC3O15438 1527 aa15.06■□□□□ 0
PCNX4-204ENST00000406949 HECW2Q9P2P5 1572 aa15.06■□□□□ 0
PCNX4-204ENST00000406949 DEPDC5O75140 1603 aa15.06■□□□□ 0
PCNX4-204ENST00000406949 HSP90AA1P07900 732 aaKnown RBP15.06■□□□□ 0
PCNX4-204ENST00000406949 HDGFP51858 240 aaKnown RBP15.05■□□□□ -0
PCNX4-204ENST00000406949 NINLQ9Y2I6 1382 aa15.05■□□□□ -0
PCNX4-204ENST00000406949 ADGRB3O60242 1522 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 APBB1O00213 710 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms