RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 TULP4Q9NRJ4 1543 aa28.51■■■□□ 2.15
CHKB-201ENST00000406938 MINK1Q8N4C8 1332 aaPredicted RBP28.5■■■□□ 2.15
CHKB-201ENST00000406938 POLR3GLQ9BT43 218 aa28.49■■■□□ 2.15
CHKB-201ENST00000406938 CDCA8Q53HL2 280 aa28.46■■■□□ 2.15
CHKB-201ENST00000406938 NKTRP30414 1462 aaKnown RBP28.45■■■□□ 2.15
CHKB-201ENST00000406938 EVC2Q86UK5 1308 aa28.45■■■□□ 2.14
CHKB-201ENST00000406938 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.45■■■□□ 2.14
CHKB-201ENST00000406938 ADGRB2O60241 1585 aa28.44■■■□□ 2.14
CHKB-201ENST00000406938 DDX10Q13206 875 aaKnown RBP28.43■■■□□ 2.14
CHKB-201ENST00000406938 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
CHKB-201ENST00000406938 DMRT2Q9Y5R5 561 aa28.42■■■□□ 2.14
CHKB-201ENST00000406938 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
CHKB-201ENST00000406938 DIEXFQ68CQ4 756 aaKnown RBP28.36■■■□□ 2.13
CHKB-201ENST00000406938 MYOM1P52179 1685 aa28.36■■■□□ 2.13
CHKB-201ENST00000406938 SRPK2P78362 688 aaKnown RBP28.36■■■□□ 2.13
CHKB-201ENST00000406938 CDK19Q9BWU1 502 aa28.36■■■□□ 2.13
CHKB-201ENST00000406938 CABP2Q9NPB3 220 aa28.36■■■□□ 2.13
CHKB-201ENST00000406938 NALCNQ8IZF0 1738 aa28.35■■■□□ 2.13
CHKB-201ENST00000406938 ZNF335Q9H4Z2 1342 aaPredicted RBP28.35■■■□□ 2.13
CHKB-201ENST00000406938 WASLO00401 505 aaPredicted RBP28.35■■■□□ 2.13
CHKB-201ENST00000406938 RBM33Q96EV2 1170 aaKnown RBP28.35■■■□□ 2.13
CHKB-201ENST00000406938 PUS7Q96PZ0 661 aaKnown RBP28.34■■■□□ 2.13
CHKB-201ENST00000406938 ADGRL3Q9HAR2 1447 aa28.33■■■□□ 2.13
CHKB-201ENST00000406938 PROSER2Q86WR7 435 aaPredicted RBP28.32■■■□□ 2.12
CHKB-201ENST00000406938 ATAD2Q6PL18 1390 aa28.31■■■□□ 2.12
CHKB-201ENST00000406938 CDC42BPGQ6DT37 1551 aa28.3■■■□□ 2.12
CHKB-201ENST00000406938 TMEM94Q12767 1356 aa28.28■■■□□ 2.12
CHKB-201ENST00000406938 C14orf37Q86TY3 774 aa28.26■■■□□ 2.11
CHKB-201ENST00000406938 ATP7BP35670 1465 aa28.26■■■□□ 2.11
CHKB-201ENST00000406938 NCOA3Q9Y6Q9 1424 aa28.24■■■□□ 2.11
CHKB-201ENST00000406938 LRRC7Q96NW7 1537 aa28.24■■■□□ 2.11
CHKB-201ENST00000406938 TMC1Q8TDI8 760 aa28.24■■■□□ 2.11
CHKB-201ENST00000406938 NINLQ9Y2I6 1382 aa28.24■■■□□ 2.11
CHKB-201ENST00000406938 FMN2Q9NZ56 1722 aa28.23■■■□□ 2.11
CHKB-201ENST00000406938 PRR36Q9H6K5 1346 aa28.22■■■□□ 2.11
CHKB-201ENST00000406938 NUDT16Q96DE0 195 aaKnown RBP28.21■■■□□ 2.11
CHKB-201ENST00000406938 SLC12A5Q9H2X9 1139 aa28.21■■■□□ 2.11
CHKB-201ENST00000406938 USP32Q8NFA0 1604 aa28.21■■■□□ 2.11
CHKB-201ENST00000406938 PANK3Q9H999 370 aa28.21■■■□□ 2.11
CHKB-201ENST00000406938 NUTM2FA1L443 756 aa28.2■■■□□ 2.1
CHKB-201ENST00000406938 TOPAZ1Q8N9V7 1692 aa28.2■■■□□ 2.1
CHKB-201ENST00000406938 PPIP5K1Q6PFW1 1433 aa28.19■■■□□ 2.1
CHKB-201ENST00000406938 ANKARQ7Z5J8 1434 aa28.19■■■□□ 2.1
CHKB-201ENST00000406938 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
CHKB-201ENST00000406938 C19orf44Q9H6X5 657 aa28.17■■■□□ 2.1
CHKB-201ENST00000406938 CCDC61Q9Y6R9 512 aa28.17■■■□□ 2.1
CHKB-201ENST00000406938 CABP1Q9NZU7 370 aa28.16■■■□□ 2.1
CHKB-201ENST00000406938 DCCP43146 1447 aa28.16■■■□□ 2.1
CHKB-201ENST00000406938 ANKRD36BQ8N2N9 1353 aa28.16■■■□□ 2.1
CHKB-201ENST00000406938 CD163L1Q9NR16 1453 aa28.15■■■□□ 2.1
CHKB-201ENST00000406938 MSH6P52701 1360 aa28.13■■■□□ 2.09
CHKB-201ENST00000406938 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
CHKB-201ENST00000406938 ITSN1Q15811 1721 aa28.13■■■□□ 2.09
CHKB-201ENST00000406938 A0A1W2PP64 1363 aa28.13■■■□□ 2.09
CHKB-201ENST00000406938 PER1O15534 1290 aaPredicted RBP28.11■■■□□ 2.09
CHKB-201ENST00000406938 RGPD8O14715 1765 aaPredicted RBP28.1■■■□□ 2.09
CHKB-201ENST00000406938 TERF2IPQ9NYB0 399 aa28.1■■■□□ 2.09
CHKB-201ENST00000406938 CARD14Q9BXL6 1004 aa28.09■■■□□ 2.09
CHKB-201ENST00000406938 ATF3P18847 181 aa28.08■■■□□ 2.09
CHKB-201ENST00000406938 NSD3Q9BZ95 1437 aa28.08■■■□□ 2.09
CHKB-201ENST00000406938 CPSF1Q10570 1443 aaKnown RBP28.07■■■□□ 2.08
CHKB-201ENST00000406938 HDGFL2Q7Z4V5 671 aaPredicted RBP28.07■■■□□ 2.08
CHKB-201ENST00000406938 PLEKHG3A1L390 1219 aa28.06■■■□□ 2.08
CHKB-201ENST00000406938 KNSTRNQ9Y448 316 aa28.06■■■□□ 2.08
CHKB-201ENST00000406938 MST1RQ04912 1400 aa28.05■■■□□ 2.08
CHKB-201ENST00000406938 CADPS2Q86UW7 1296 aa28.05■■■□□ 2.08
CHKB-201ENST00000406938 C1orf167Q5SNV9 1468 aa28.04■■■□□ 2.08
CHKB-201ENST00000406938 ANP32CO43423 234 aa28.04■■■□□ 2.08
CHKB-201ENST00000406938 AKAP12Q02952 1782 aa28.03■■■□□ 2.08
CHKB-201ENST00000406938 PMFBP1Q8TBY8 1022 aa28.02■■■□□ 2.08
CHKB-201ENST00000406938 ACEP12821 1306 aa28.02■■■□□ 2.08
CHKB-201ENST00000406938 POLR3AO14802 1390 aaPredicted RBP28.01■■■□□ 2.07
CHKB-201ENST00000406938 MON2Q7Z3U7 1717 aa28.01■■■□□ 2.07
CHKB-201ENST00000406938 KTN1Q86UP2 1357 aaKnown RBP28.01■■■□□ 2.07
CHKB-201ENST00000406938 MIER1Q8N108 512 aa28.01■■■□□ 2.07
CHKB-201ENST00000406938 CNGB1Q14028 1251 aaPredicted RBP28■■■□□ 2.07
CHKB-201ENST00000406938 ESCO1Q5FWF5 840 aa28■■■□□ 2.07
CHKB-201ENST00000406938 AMER1Q5JTC6 1135 aaPredicted RBP28■■■□□ 2.07
CHKB-201ENST00000406938 PHF8Q9UPP1 1060 aa27.99■■■□□ 2.07
CHKB-201ENST00000406938 EDC4Q6P2E9 1401 aaKnown RBP27.98■■■□□ 2.07
CHKB-201ENST00000406938 ORAI2Q96SN7 254 aa27.97■■■□□ 2.07
CHKB-201ENST00000406938 PRKRIP1Q9H875 184 aaPredicted RBP27.97■■■□□ 2.07
CHKB-201ENST00000406938 NPC1L1Q9UHC9 1359 aa27.97■■■□□ 2.07
CHKB-201ENST00000406938 NGDNQ8NEJ9 315 aaKnown RBP27.96■■■□□ 2.07
CHKB-201ENST00000406938 ZNF692Q9BU19 519 aaPredicted RBP27.96■■■□□ 2.07
CHKB-201ENST00000406938 USP6P35125 1406 aa27.96■■■□□ 2.07
CHKB-201ENST00000406938 NRKQ7Z2Y5 1582 aa27.96■■■□□ 2.07
CHKB-201ENST00000406938 CGNL1Q0VF96 1302 aa27.96■■■□□ 2.07
CHKB-201ENST00000406938 CC2D1BQ5T0F9 858 aaKnown RBP27.96■■■□□ 2.07
CHKB-201ENST00000406938 KIF1AQ12756 1690 aa27.95■■■□□ 2.07
CHKB-201ENST00000406938 PARD3Q8TEW0 1356 aa27.92■■■□□ 2.06
CHKB-201ENST00000406938 NSD2O96028 1365 aa27.9■■■□□ 2.06
CHKB-201ENST00000406938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.9■■■□□ 2.06
CHKB-201ENST00000406938 SLAIN2Q9P270 581 aa27.89■■■□□ 2.06
CHKB-201ENST00000406938 SSH2Q76I76 1423 aa27.89■■■□□ 2.06
CHKB-201ENST00000406938 KIF20BQ96Q89 1820 aa27.88■■■□□ 2.05
CHKB-201ENST00000406938 RALBP1Q15311 655 aa27.87■■■□□ 2.05
CHKB-201ENST00000406938 TTC21BQ7Z4L5 1316 aa27.86■■■□□ 2.05
CHKB-201ENST00000406938 FYB1O15117 783 aa27.85■■■□□ 2.05
CHKB-201ENST00000406938 FOXO3O43524 673 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms