RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 NGEFQ8N5V2 710 aa21.35■■□□□ 1.01
CDKN1A-203ENST00000405375 SHPRHQ149N8 1683 aa21.35■■□□□ 1.01
CDKN1A-203ENST00000405375 MORC1Q86VD1 984 aa21.35■■□□□ 1.01
CDKN1A-203ENST00000405375 C20orf194Q5TEA3 1177 aa21.34■■□□□ 1.01
CDKN1A-203ENST00000405375 DIP2BQ9P265 1576 aa21.33■■□□□ 1.01
CDKN1A-203ENST00000405375 SPINK5Q9NQ38 1064 aaPredicted RBP21.33■■□□□ 1.01
CDKN1A-203ENST00000405375 ANKRD36BQ8N2N9 1353 aa21.32■■□□□ 1
CDKN1A-203ENST00000405375 CGNL1Q0VF96 1302 aa21.32■■□□□ 1
CDKN1A-203ENST00000405375 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
CDKN1A-203ENST00000405375 NKTRP30414 1462 aaKnown RBP21.31■■□□□ 1
CDKN1A-203ENST00000405375 E9PSI1 815 aa21.29■■□□□ 1
CDKN1A-203ENST00000405375 REREQ9P2R6 1566 aa21.29■■□□□ 1
CDKN1A-203ENST00000405375 NSD2O96028 1365 aa21.28■■□□□ 1
CDKN1A-203ENST00000405375 PTPRMP28827 1452 aa21.28■■□□□ 1
CDKN1A-203ENST00000405375 DMRT2Q9Y5R5 561 aa21.27■■□□□ 1
CDKN1A-203ENST00000405375 TNNT2P45379 298 aaPredicted RBP21.27■■□□□ 1
CDKN1A-203ENST00000405375 FBXO31Q5XUX0 539 aaPredicted RBP21.27■■□□□ 1
CDKN1A-203ENST00000405375 CABP2Q9NPB3 220 aa21.27■■□□□ 1
CDKN1A-203ENST00000405375 AGLP35573 1532 aa21.26■□□□□ 0.99
CDKN1A-203ENST00000405375 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.26■□□□□ 0.99
CDKN1A-203ENST00000405375 NINLQ9Y2I6 1382 aa21.25■□□□□ 0.99
CDKN1A-203ENST00000405375 MS4A1P11836 297 aa21.25■□□□□ 0.99
CDKN1A-203ENST00000405375 MTHFSP49914 203 aa21.25■□□□□ 0.99
CDKN1A-203ENST00000405375 WWC1Q8IX03 1113 aa21.25■□□□□ 0.99
CDKN1A-203ENST00000405375 IQSEC2Q5JU85 1478 aa21.24■□□□□ 0.99
CDKN1A-203ENST00000405375 YTHDC2Q9H6S0 1430 aaKnown RBP21.24■□□□□ 0.99
CDKN1A-203ENST00000405375 SAFB2Q14151 953 aaKnown RBP eCLIP21.24■□□□□ 0.99
CDKN1A-203ENST00000405375 STK26Q9P289 416 aa21.24■□□□□ 0.99
CDKN1A-203ENST00000405375 KDM2BQ8NHM5 1336 aa21.23■□□□□ 0.99
CDKN1A-203ENST00000405375 ERICH6Q7L0X2 663 aa21.22■□□□□ 0.99
CDKN1A-203ENST00000405375 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
CDKN1A-203ENST00000405375 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
CDKN1A-203ENST00000405375 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
CDKN1A-203ENST00000405375 A0A1W2PP64 1363 aa21.22■□□□□ 0.99
CDKN1A-203ENST00000405375 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
CDKN1A-203ENST00000405375 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
CDKN1A-203ENST00000405375 ALKQ9UM73 1620 aa21.21■□□□□ 0.99
CDKN1A-203ENST00000405375 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
CDKN1A-203ENST00000405375 CFAP53Q96M91 514 aa21.2■□□□□ 0.98
CDKN1A-203ENST00000405375 ATAD2Q6PL18 1390 aa21.19■□□□□ 0.98
CDKN1A-203ENST00000405375 ANP32AP39687 249 aaKnown RBP21.19■□□□□ 0.98
CDKN1A-203ENST00000405375 PDE4AP27815 886 aa21.18■□□□□ 0.98
CDKN1A-203ENST00000405375 PRAM1Q96QH2 718 aa21.18■□□□□ 0.98
CDKN1A-203ENST00000405375 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
CDKN1A-203ENST00000405375 BCAR3O75815 825 aa21.18■□□□□ 0.98
CDKN1A-203ENST00000405375 SRPK2P78362 688 aaKnown RBP21.18■□□□□ 0.98
CDKN1A-203ENST00000405375 TCP11L2Q8N4U5 519 aa21.18■□□□□ 0.98
CDKN1A-203ENST00000405375 BACH2Q9BYV9 841 aa21.18■□□□□ 0.98
CDKN1A-203ENST00000405375 SPATA31D1Q6ZQQ2 1576 aa21.17■□□□□ 0.98
CDKN1A-203ENST00000405375 NOP58Q9Y2X3 529 aaKnown RBP21.17■□□□□ 0.98
CDKN1A-203ENST00000405375 CD163L1Q9NR16 1453 aa21.17■□□□□ 0.98
CDKN1A-203ENST00000405375 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
CDKN1A-203ENST00000405375 IPO9Q96P70 1041 aaKnown RBP21.16■□□□□ 0.98
CDKN1A-203ENST00000405375 MINK1Q8N4C8 1332 aaPredicted RBP21.16■□□□□ 0.98
CDKN1A-203ENST00000405375 A2ML1A8K2U0 1454 aa21.15■□□□□ 0.98
CDKN1A-203ENST00000405375 CCDC27Q2M243 656 aa21.15■□□□□ 0.98
CDKN1A-203ENST00000405375 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
CDKN1A-203ENST00000405375 POGKQ9P215 609 aa21.15■□□□□ 0.98
CDKN1A-203ENST00000405375 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.97
CDKN1A-203ENST00000405375 NLRP1Q9C000 1473 aa21.14■□□□□ 0.97
CDKN1A-203ENST00000405375 RRP7AQ9Y3A4 280 aaKnown RBP21.14■□□□□ 0.97
CDKN1A-203ENST00000405375 MED14O60244 1454 aa21.14■□□□□ 0.97
CDKN1A-203ENST00000405375 SKAP1Q86WV1 359 aa21.13■□□□□ 0.97
CDKN1A-203ENST00000405375 WDR63Q8IWG1 891 aa21.13■□□□□ 0.97
CDKN1A-203ENST00000405375 STAG3Q9UJ98 1225 aa21.13■□□□□ 0.97
CDKN1A-203ENST00000405375 PAK3O75914 559 aaPredicted RBP21.12■□□□□ 0.97
CDKN1A-203ENST00000405375 NEUROD2Q15784 382 aa21.12■□□□□ 0.97
CDKN1A-203ENST00000405375 TERF2IPQ9NYB0 399 aa21.12■□□□□ 0.97
CDKN1A-203ENST00000405375 ANKRD26Q9UPS8 1709 aa21.12■□□□□ 0.97
CDKN1A-203ENST00000405375 ADGRB2O60241 1585 aa21.11■□□□□ 0.97
CDKN1A-203ENST00000405375 DLC1Q96QB1 1528 aa21.11■□□□□ 0.97
CDKN1A-203ENST00000405375 COL3A1P02461 1466 aaPredicted RBP21.1■□□□□ 0.97
CDKN1A-203ENST00000405375 SETD1AO15047 1707 aaKnown RBP21.1■□□□□ 0.97
CDKN1A-203ENST00000405375 FYB1O15117 783 aa21.1■□□□□ 0.97
CDKN1A-203ENST00000405375 PDE3AQ14432 1141 aa21.1■□□□□ 0.97
CDKN1A-203ENST00000405375 GGNBP2Q9H3C7 697 aa21.1■□□□□ 0.97
CDKN1A-203ENST00000405375 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
CDKN1A-203ENST00000405375 U2AF1Q01081 240 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDKN1A-203ENST00000405375 RIMS2Q9UQ26 1411 aa21.09■□□□□ 0.97
CDKN1A-203ENST00000405375 CDK19Q9BWU1 502 aa21.08■□□□□ 0.97
CDKN1A-203ENST00000405375 RARSP54136 660 aaKnown RBP21.06■□□□□ 0.96
CDKN1A-203ENST00000405375 MLECQ14165 292 aa21.06■□□□□ 0.96
CDKN1A-203ENST00000405375 HDGFL2Q7Z4V5 671 aaPredicted RBP21.04■□□□□ 0.96
CDKN1A-203ENST00000405375 PLEKHF1Q96S99 279 aa21.04■□□□□ 0.96
CDKN1A-203ENST00000405375 CABP1Q9NZU7 370 aa21.03■□□□□ 0.96
CDKN1A-203ENST00000405375 ZBTB47Q9UFB7 747 aaPredicted RBP21.03■□□□□ 0.96
CDKN1A-203ENST00000405375 NRXN3Q9Y4C0 1643 aa21.03■□□□□ 0.96
CDKN1A-203ENST00000405375 PNPLA6Q8IY17 1366 aa21.02■□□□□ 0.96
CDKN1A-203ENST00000405375 KIF13AQ9H1H9 1805 aa21.02■□□□□ 0.96
CDKN1A-203ENST00000405375 KIF20BQ96Q89 1820 aa21.01■□□□□ 0.95
CDKN1A-203ENST00000405375 WAPLQ7Z5K2 1190 aa21.01■□□□□ 0.95
CDKN1A-203ENST00000405375 NPM2Q86SE8 214 aaKnown RBP21.01■□□□□ 0.95
CDKN1A-203ENST00000405375 ATP7BP35670 1465 aa21.01■□□□□ 0.95
CDKN1A-203ENST00000405375 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
CDKN1A-203ENST00000405375 MYH16Q9H6N6 1097 aa21.01■□□□□ 0.95
CDKN1A-203ENST00000405375 CANXP27824 592 aaKnown RBP20.99■□□□□ 0.95
CDKN1A-203ENST00000405375 CLUAP1Q96AJ1 413 aa20.99■□□□□ 0.95
CDKN1A-203ENST00000405375 COG6Q9Y2V7 657 aa20.99■□□□□ 0.95
CDKN1A-203ENST00000405375 ZMYM3Q14202 1370 aa20.98■□□□□ 0.95
CDKN1A-203ENST00000405375 U2SURPO15042 1029 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms