RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
CLIP4-204ENST00000404424 CHGAP10645 457 aaKnown RBP13.88□□□□□ -0.19
CLIP4-204ENST00000404424 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
CLIP4-204ENST00000404424 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
CLIP4-204ENST00000404424 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
CLIP4-204ENST00000404424 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
CLIP4-204ENST00000404424 PHF23Q9BUL5 403 aaPredicted RBP13.87□□□□□ -0.19
CLIP4-204ENST00000404424 POGZQ7Z3K3 1410 aa13.86□□□□□ -0.19
CLIP4-204ENST00000404424 RGS3P49796 1198 aa13.86□□□□□ -0.19
CLIP4-204ENST00000404424 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
CLIP4-204ENST00000404424 CLUAP1Q96AJ1 413 aa13.86□□□□□ -0.19
CLIP4-204ENST00000404424 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
CLIP4-204ENST00000404424 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
CLIP4-204ENST00000404424 NSD2O96028 1365 aa13.85□□□□□ -0.19
CLIP4-204ENST00000404424 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
CLIP4-204ENST00000404424 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
CLIP4-204ENST00000404424 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
CLIP4-204ENST00000404424 FRMPD1Q5SYB0 1578 aa13.85□□□□□ -0.19
CLIP4-204ENST00000404424 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLIP4-204ENST00000404424 HECW2Q9P2P5 1572 aa13.85□□□□□ -0.19
CLIP4-204ENST00000404424 IGHDP01880 384 aa13.84□□□□□ -0.19
CLIP4-204ENST00000404424 TCP11L2Q8N4U5 519 aa13.84□□□□□ -0.19
CLIP4-204ENST00000404424 CD109Q6YHK3 1445 aa13.83□□□□□ -0.2
CLIP4-204ENST00000404424 GGT6Q6P531 493 aa13.83□□□□□ -0.2
CLIP4-204ENST00000404424 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
CLIP4-204ENST00000404424 ABCC3O15438 1527 aa13.83□□□□□ -0.2
CLIP4-204ENST00000404424 RARSP54136 660 aaKnown RBP13.83□□□□□ -0.2
CLIP4-204ENST00000404424 ANKRD36BQ8N2N9 1353 aa13.82□□□□□ -0.2
CLIP4-204ENST00000404424 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
CLIP4-204ENST00000404424 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
CLIP4-204ENST00000404424 MTHFSP49914 203 aa13.82□□□□□ -0.2
CLIP4-204ENST00000404424 COG6Q9Y2V7 657 aa13.82□□□□□ -0.2
CLIP4-204ENST00000404424 VIRMAQ69YN4 1812 aaKnown RBP13.81□□□□□ -0.2
CLIP4-204ENST00000404424 NFKBIBQ15653 356 aa13.81□□□□□ -0.2
CLIP4-204ENST00000404424 TMEM132EQ6IEE7 984 aa13.81□□□□□ -0.2
CLIP4-204ENST00000404424 ZMYM3Q14202 1370 aa13.81□□□□□ -0.2
CLIP4-204ENST00000404424 GLI2P10070 1586 aa13.81□□□□□ -0.2
CLIP4-204ENST00000404424 TNNT2P45379 298 aaPredicted RBP13.81□□□□□ -0.2
CLIP4-204ENST00000404424 PANK1Q8TE04 598 aa13.81□□□□□ -0.2
CLIP4-204ENST00000404424 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
CLIP4-204ENST00000404424 MYH16Q9H6N6 1097 aa13.8□□□□□ -0.2
CLIP4-204ENST00000404424 PIK3C2BO00750 1634 aa13.8□□□□□ -0.2
CLIP4-204ENST00000404424 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
CLIP4-204ENST00000404424 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
CLIP4-204ENST00000404424 SLC4A3P48751 1232 aa13.79□□□□□ -0.2
CLIP4-204ENST00000404424 FRAT1Q92837 279 aaPredicted RBP13.79□□□□□ -0.2
CLIP4-204ENST00000404424 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
CLIP4-204ENST00000404424 ARHGEF28Q8N1W1 1705 aaKnown RBP13.78□□□□□ -0.2
CLIP4-204ENST00000404424 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
CLIP4-204ENST00000404424 NEXMIFQ5QGS0 1516 aa13.78□□□□□ -0.2
CLIP4-204ENST00000404424 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
CLIP4-204ENST00000404424 ARHGAP31Q2M1Z3 1444 aa13.78□□□□□ -0.2
CLIP4-204ENST00000404424 ZFYVE9O95405 1425 aa13.77□□□□□ -0.2
CLIP4-204ENST00000404424 GSE1Q14687 1217 aa13.76□□□□□ -0.21
CLIP4-204ENST00000404424 NEO1Q92859 1461 aa13.76□□□□□ -0.21
CLIP4-204ENST00000404424 ADGRB2O60241 1585 aa13.76□□□□□ -0.21
CLIP4-204ENST00000404424 USP19O94966 1318 aa13.76□□□□□ -0.21
CLIP4-204ENST00000404424 SIGLEC1Q9BZZ2 1709 aa13.75□□□□□ -0.21
CLIP4-204ENST00000404424 U2AF1L5P0DN76 240 aaPredicted RBP13.74□□□□□ -0.21
CLIP4-204ENST00000404424 U2AF1Q01081 240 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLIP4-204ENST00000404424 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
CLIP4-204ENST00000404424 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
CLIP4-204ENST00000404424 SLC52A1Q9NWF4 448 aa13.74□□□□□ -0.21
CLIP4-204ENST00000404424 RLBP1P12271 317 aa13.73□□□□□ -0.21
CLIP4-204ENST00000404424 BECN1Q14457 450 aa13.73□□□□□ -0.21
CLIP4-204ENST00000404424 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
CLIP4-204ENST00000404424 CABP2Q9NPB3 220 aa13.72□□□□□ -0.21
CLIP4-204ENST00000404424 ZKSCAN2Q63HK3 967 aa13.72□□□□□ -0.21
CLIP4-204ENST00000404424 MED14O60244 1454 aa13.72□□□□□ -0.21
CLIP4-204ENST00000404424 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
CLIP4-204ENST00000404424 MVPQ14764 893 aaKnown RBP13.71□□□□□ -0.21
CLIP4-204ENST00000404424 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
CLIP4-204ENST00000404424 DIP2CQ9Y2E4 1556 aa13.71□□□□□ -0.21
CLIP4-204ENST00000404424 A0A1W2PP64 1363 aa13.71□□□□□ -0.21
CLIP4-204ENST00000404424 IDI1Q13907 227 aa13.71□□□□□ -0.21
CLIP4-204ENST00000404424 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
CLIP4-204ENST00000404424 IL16Q14005 1332 aa13.7□□□□□ -0.22
CLIP4-204ENST00000404424 DZIP1LQ8IYY4 767 aaKnown RBP13.7□□□□□ -0.22
CLIP4-204ENST00000404424 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
CLIP4-204ENST00000404424 BCL2L13Q9BXK5 485 aa13.7□□□□□ -0.22
CLIP4-204ENST00000404424 NLRP1Q9C000 1473 aa13.69□□□□□ -0.22
CLIP4-204ENST00000404424 SEC24BO95487 1268 aa13.69□□□□□ -0.22
CLIP4-204ENST00000404424 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
CLIP4-204ENST00000404424 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
CLIP4-204ENST00000404424 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
CLIP4-204ENST00000404424 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
CLIP4-204ENST00000404424 PNNQ9H307 717 aaKnown RBP13.69□□□□□ -0.22
CLIP4-204ENST00000404424 TNNQ9UQP3 1299 aa13.69□□□□□ -0.22
CLIP4-204ENST00000404424 RAPGEF3O95398 923 aa13.68□□□□□ -0.22
CLIP4-204ENST00000404424 TMPOP42166 694 aaKnown RBP13.68□□□□□ -0.22
CLIP4-204ENST00000404424 SRPK2P78362 688 aaKnown RBP13.68□□□□□ -0.22
CLIP4-204ENST00000404424 COL3A1P02461 1466 aaPredicted RBP13.68□□□□□ -0.22
CLIP4-204ENST00000404424 FRAT2O75474 233 aaPredicted RBP13.67□□□□□ -0.22
CLIP4-204ENST00000404424 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
CLIP4-204ENST00000404424 PTPRMP28827 1452 aa13.67□□□□□ -0.22
CLIP4-204ENST00000404424 CLTCQ00610 1675 aaKnown RBP13.67□□□□□ -0.22
CLIP4-204ENST00000404424 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
CLIP4-204ENST00000404424 DDX19BQ9UMR2 479 aa13.66□□□□□ -0.22
CLIP4-204ENST00000404424 U2SURPO15042 1029 aaKnown RBP13.66□□□□□ -0.22
CLIP4-204ENST00000404424 FYB1O15117 783 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms