RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 MSH5O43196 834 aa22.32■■□□□ 1.16
DNMT3A-205ENST00000402667 SLFN5Q08AF3 891 aa22.32■■□□□ 1.16
DNMT3A-205ENST00000402667 SENP3Q9H4L4 574 aaPredicted RBP22.31■■□□□ 1.16
DNMT3A-205ENST00000402667 STK26Q9P289 416 aa22.31■■□□□ 1.16
DNMT3A-205ENST00000402667 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
DNMT3A-205ENST00000402667 TNNT2P45379 298 aaPredicted RBP22.3■■□□□ 1.16
DNMT3A-205ENST00000402667 SAFB2Q14151 953 aaKnown RBP eCLIP22.3■■□□□ 1.16
DNMT3A-205ENST00000402667 TRMT2AQ8IZ69 625 aaKnown RBP22.3■■□□□ 1.16
DNMT3A-205ENST00000402667 CABP2Q9NPB3 220 aa22.3■■□□□ 1.16
DNMT3A-205ENST00000402667 USP32Q8NFA0 1604 aa22.3■■□□□ 1.16
DNMT3A-205ENST00000402667 ANKRD36BQ8N2N9 1353 aa22.29■■□□□ 1.16
DNMT3A-205ENST00000402667 CRBNQ96SW2 442 aa22.29■■□□□ 1.16
DNMT3A-205ENST00000402667 REREQ9P2R6 1566 aa22.28■■□□□ 1.16
DNMT3A-205ENST00000402667 PPP6R1Q9UPN7 881 aa22.28■■□□□ 1.16
DNMT3A-205ENST00000402667 NGEFQ8N5V2 710 aa22.27■■□□□ 1.16
DNMT3A-205ENST00000402667 AGLP35573 1532 aa22.27■■□□□ 1.16
DNMT3A-205ENST00000402667 SPINK5Q9NQ38 1064 aaPredicted RBP22.26■■□□□ 1.15
DNMT3A-205ENST00000402667 C20orf194Q5TEA3 1177 aa22.25■■□□□ 1.15
DNMT3A-205ENST00000402667 STAG3Q9UJ98 1225 aa22.24■■□□□ 1.15
DNMT3A-205ENST00000402667 PTPRMP28827 1452 aa22.24■■□□□ 1.15
DNMT3A-205ENST00000402667 SHPRHQ149N8 1683 aa22.23■■□□□ 1.15
DNMT3A-205ENST00000402667 MTHFSP49914 203 aa22.23■■□□□ 1.15
DNMT3A-205ENST00000402667 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
DNMT3A-205ENST00000402667 NSD2O96028 1365 aa22.22■■□□□ 1.15
DNMT3A-205ENST00000402667 E9PSI1 815 aa22.22■■□□□ 1.15
DNMT3A-205ENST00000402667 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
DNMT3A-205ENST00000402667 PRAM1Q96QH2 718 aa22.22■■□□□ 1.15
DNMT3A-205ENST00000402667 NINLQ9Y2I6 1382 aa22.21■■□□□ 1.15
DNMT3A-205ENST00000402667 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.15
DNMT3A-205ENST00000402667 CLTCQ00610 1675 aaKnown RBP22.2■■□□□ 1.14
DNMT3A-205ENST00000402667 NKTRP30414 1462 aaKnown RBP22.2■■□□□ 1.14
DNMT3A-205ENST00000402667 POGKQ9P215 609 aa22.2■■□□□ 1.14
DNMT3A-205ENST00000402667 ALKQ9UM73 1620 aa22.2■■□□□ 1.14
DNMT3A-205ENST00000402667 MINK1Q8N4C8 1332 aaPredicted RBP22.19■■□□□ 1.14
DNMT3A-205ENST00000402667 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.19■■□□□ 1.14
DNMT3A-205ENST00000402667 A0A1W2PP64 1363 aa22.19■■□□□ 1.14
DNMT3A-205ENST00000402667 WWC1Q8IX03 1113 aa22.18■■□□□ 1.14
DNMT3A-205ENST00000402667 RUNDC1Q96C34 613 aa22.18■■□□□ 1.14
DNMT3A-205ENST00000402667 CFAP53Q96M91 514 aa22.18■■□□□ 1.14
DNMT3A-205ENST00000402667 MLECQ14165 292 aa22.17■■□□□ 1.14
DNMT3A-205ENST00000402667 TCERG1O14776 1098 aaKnown RBP22.17■■□□□ 1.14
DNMT3A-205ENST00000402667 ATAD2Q6PL18 1390 aa22.17■■□□□ 1.14
DNMT3A-205ENST00000402667 ABCC11Q96J66 1382 aa22.16■■□□□ 1.14
DNMT3A-205ENST00000402667 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
DNMT3A-205ENST00000402667 A2ML1A8K2U0 1454 aa22.16■■□□□ 1.14
DNMT3A-205ENST00000402667 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
DNMT3A-205ENST00000402667 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
DNMT3A-205ENST00000402667 NEUROD2Q15784 382 aa22.12■■□□□ 1.13
DNMT3A-205ENST00000402667 IQSEC2Q5JU85 1478 aa22.12■■□□□ 1.13
DNMT3A-205ENST00000402667 RRP7AQ9Y3A4 280 aaKnown RBP22.12■■□□□ 1.13
DNMT3A-205ENST00000402667 BCAR3O75815 825 aa22.11■■□□□ 1.13
DNMT3A-205ENST00000402667 CDK19Q9BWU1 502 aa22.11■■□□□ 1.13
DNMT3A-205ENST00000402667 RIMS2Q9UQ26 1411 aa22.11■■□□□ 1.13
DNMT3A-205ENST00000402667 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
DNMT3A-205ENST00000402667 GGNBP2Q9H3C7 697 aa22.11■■□□□ 1.13
DNMT3A-205ENST00000402667 CD163L1Q9NR16 1453 aa22.1■■□□□ 1.13
DNMT3A-205ENST00000402667 ARHGEF40Q8TER5 1519 aa22.09■■□□□ 1.13
DNMT3A-205ENST00000402667 FYB1O15117 783 aa22.09■■□□□ 1.13
DNMT3A-205ENST00000402667 MS4A1P11836 297 aa22.09■■□□□ 1.13
DNMT3A-205ENST00000402667 KDM2BQ8NHM5 1336 aa22.08■■□□□ 1.12
DNMT3A-205ENST00000402667 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.12
DNMT3A-205ENST00000402667 U2AF1L5P0DN76 240 aaPredicted RBP22.07■■□□□ 1.12
DNMT3A-205ENST00000402667 U2AF1Q01081 240 aaKnown RBP eCLIP22.07■■□□□ 1.12
DNMT3A-205ENST00000402667 ERICH6Q7L0X2 663 aa22.07■■□□□ 1.12
DNMT3A-205ENST00000402667 CCDC27Q2M243 656 aa22.06■■□□□ 1.12
DNMT3A-205ENST00000402667 WDR63Q8IWG1 891 aa22.06■■□□□ 1.12
DNMT3A-205ENST00000402667 DLC1Q96QB1 1528 aa22.06■■□□□ 1.12
DNMT3A-205ENST00000402667 HDGFL2Q7Z4V5 671 aaPredicted RBP22.06■■□□□ 1.12
DNMT3A-205ENST00000402667 WAPLQ7Z5K2 1190 aa22.06■■□□□ 1.12
DNMT3A-205ENST00000402667 CABP1Q9NZU7 370 aa22.06■■□□□ 1.12
DNMT3A-205ENST00000402667 PDE4AP27815 886 aa22.05■■□□□ 1.12
DNMT3A-205ENST00000402667 ZMYM3Q14202 1370 aa22.05■■□□□ 1.12
DNMT3A-205ENST00000402667 MED14O60244 1454 aa22.05■■□□□ 1.12
DNMT3A-205ENST00000402667 NLRP1Q9C000 1473 aa22.05■■□□□ 1.12
DNMT3A-205ENST00000402667 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
DNMT3A-205ENST00000402667 CENPQQ7L2Z9 268 aaPredicted RBP22.04■■□□□ 1.12
DNMT3A-205ENST00000402667 SETD1AO15047 1707 aaKnown RBP22.04■■□□□ 1.12
DNMT3A-205ENST00000402667 ANP32AP39687 249 aaKnown RBP22.03■■□□□ 1.12
DNMT3A-205ENST00000402667 SKAP1Q86WV1 359 aa22.03■■□□□ 1.12
DNMT3A-205ENST00000402667 ESF1Q9H501 851 aaKnown RBP22.03■■□□□ 1.12
DNMT3A-205ENST00000402667 BACH2Q9BYV9 841 aa22.02■■□□□ 1.12
DNMT3A-205ENST00000402667 ANKRD26Q9UPS8 1709 aa22.02■■□□□ 1.12
DNMT3A-205ENST00000402667 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.01■■□□□ 1.11
DNMT3A-205ENST00000402667 COL3A1P02461 1466 aaPredicted RBP22■■□□□ 1.11
DNMT3A-205ENST00000402667 PDE3AQ14432 1141 aa22■■□□□ 1.11
DNMT3A-205ENST00000402667 U2SURPO15042 1029 aaKnown RBP21.98■■□□□ 1.11
DNMT3A-205ENST00000402667 IPO9Q96P70 1041 aaKnown RBP21.98■■□□□ 1.11
DNMT3A-205ENST00000402667 NRXN3Q9Y4C0 1643 aa21.98■■□□□ 1.11
DNMT3A-205ENST00000402667 PLEKHF1Q96S99 279 aa21.98■■□□□ 1.11
DNMT3A-205ENST00000402667 ADGRB2O60241 1585 aa21.98■■□□□ 1.11
DNMT3A-205ENST00000402667 RARSP54136 660 aaKnown RBP21.97■■□□□ 1.11
DNMT3A-205ENST00000402667 NOP58Q9Y2X3 529 aaKnown RBP21.97■■□□□ 1.11
DNMT3A-205ENST00000402667 METP08581 1390 aa21.97■■□□□ 1.11
DNMT3A-205ENST00000402667 ATP7BP35670 1465 aa21.95■■□□□ 1.1
DNMT3A-205ENST00000402667 CANXP27824 592 aaKnown RBP21.95■■□□□ 1.1
DNMT3A-205ENST00000402667 MYH16Q9H6N6 1097 aa21.95■■□□□ 1.1
DNMT3A-205ENST00000402667 PNPLA6Q8IY17 1366 aa21.94■■□□□ 1.1
DNMT3A-205ENST00000402667 KIF20BQ96Q89 1820 aa21.94■■□□□ 1.1
DNMT3A-205ENST00000402667 HDGFP51858 240 aaKnown RBP21.94■■□□□ 1.1
DNMT3A-205ENST00000402667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms