RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 KNDC1Q76NI1 1749 aa23.22■■□□□ 1.31
ATG4B-203ENST00000400772 KDM2AQ9Y2K7 1162 aa23.22■■□□□ 1.31
ATG4B-203ENST00000400772 DHX57Q6P158 1386 aaKnown RBP23.22■■□□□ 1.31
ATG4B-203ENST00000400772 SPATA31A6Q5VVP1 1343 aa23.21■■□□□ 1.31
ATG4B-203ENST00000400772 LRP6O75581 1613 aa23.19■■□□□ 1.3
ATG4B-203ENST00000400772 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
ATG4B-203ENST00000400772 LAMC1P11047 1609 aa23.19■■□□□ 1.3
ATG4B-203ENST00000400772 CDC42BPGQ6DT37 1551 aa23.18■■□□□ 1.3
ATG4B-203ENST00000400772 LRRC59Q96AG4 307 aaKnown RBP23.18■■□□□ 1.3
ATG4B-203ENST00000400772 STAC3Q96MF2 364 aa23.18■■□□□ 1.3
ATG4B-203ENST00000400772 ADGRB1O14514 1584 aa23.16■■□□□ 1.3
ATG4B-203ENST00000400772 POTEAQ6S8J7 498 aa23.16■■□□□ 1.3
ATG4B-203ENST00000400772 SOS2Q07890 1332 aaPredicted RBP23.15■■□□□ 1.3
ATG4B-203ENST00000400772 ESCO1Q5FWF5 840 aa23.14■■□□□ 1.29
ATG4B-203ENST00000400772 PRAM1Q96QH2 718 aa23.14■■□□□ 1.29
ATG4B-203ENST00000400772 NUTM2FA1L443 756 aa23.13■■□□□ 1.29
ATG4B-203ENST00000400772 PNPLA6Q8IY17 1366 aa23.12■■□□□ 1.29
ATG4B-203ENST00000400772 NUTM2BA6NNL0 878 aaPredicted RBP23.11■■□□□ 1.29
ATG4B-203ENST00000400772 NUTM2EB1AL46 878 aaPredicted RBP23.11■■□□□ 1.29
ATG4B-203ENST00000400772 NUTM2AQ8IVF1 878 aaPredicted RBP23.11■■□□□ 1.29
ATG4B-203ENST00000400772 DLC1Q96QB1 1528 aa23.11■■□□□ 1.29
ATG4B-203ENST00000400772 SAFB2Q14151 953 aaKnown RBP eCLIP23.1■■□□□ 1.29
ATG4B-203ENST00000400772 TRAK1Q9UPV9 953 aa23.1■■□□□ 1.29
ATG4B-203ENST00000400772 MEX3CQ5U5Q3 659 aaKnown RBP23.09■■□□□ 1.29
ATG4B-203ENST00000400772 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.28
ATG4B-203ENST00000400772 FOXO3O43524 673 aa23.07■■□□□ 1.28
ATG4B-203ENST00000400772 POGKQ9P215 609 aa23.07■■□□□ 1.28
ATG4B-203ENST00000400772 NPHP3Q7Z494 1330 aa23.06■■□□□ 1.28
ATG4B-203ENST00000400772 PXDNQ92626 1479 aa23.05■■□□□ 1.28
ATG4B-203ENST00000400772 XPCQ01831 940 aaPredicted RBP23.04■■□□□ 1.28
ATG4B-203ENST00000400772 SIN3AQ96ST3 1273 aa23.02■■□□□ 1.28
ATG4B-203ENST00000400772 ZNF772Q68DY9 489 aaPredicted RBP23.01■■□□□ 1.27
ATG4B-203ENST00000400772 HIRIP3Q9BW71 556 aaPredicted RBP23.01■■□□□ 1.27
ATG4B-203ENST00000400772 RGPD8O14715 1765 aaPredicted RBP22.99■■□□□ 1.27
ATG4B-203ENST00000400772 PHF8Q9UPP1 1060 aa22.99■■□□□ 1.27
ATG4B-203ENST00000400772 MINK1Q8N4C8 1332 aaPredicted RBP22.99■■□□□ 1.27
ATG4B-203ENST00000400772 ADGRB2O60241 1585 aa22.98■■□□□ 1.27
ATG4B-203ENST00000400772 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
ATG4B-203ENST00000400772 L3MBTL2Q969R5 705 aa22.98■■□□□ 1.27
ATG4B-203ENST00000400772 AFF2P51816 1311 aa22.98■■□□□ 1.27
ATG4B-203ENST00000400772 ADAMTS2O95450 1211 aa22.97■■□□□ 1.27
ATG4B-203ENST00000400772 C8orf37Q96NL8 207 aa22.97■■□□□ 1.27
ATG4B-203ENST00000400772 KRT28Q7Z3Y7 464 aa22.96■■□□□ 1.27
ATG4B-203ENST00000400772 USP32Q8NFA0 1604 aa22.96■■□□□ 1.27
ATG4B-203ENST00000400772 COL22A1Q8NFW1 1626 aaPredicted RBP22.96■■□□□ 1.27
ATG4B-203ENST00000400772 KIF1AQ12756 1690 aa22.96■■□□□ 1.27
ATG4B-203ENST00000400772 ANKARQ7Z5J8 1434 aa22.95■■□□□ 1.26
ATG4B-203ENST00000400772 KIAA1210Q9ULL0 1709 aa22.95■■□□□ 1.26
ATG4B-203ENST00000400772 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
ATG4B-203ENST00000400772 SPATA31A3Q5VYP0 1347 aa22.94■■□□□ 1.26
ATG4B-203ENST00000400772 PRR36Q9H6K5 1346 aa22.94■■□□□ 1.26
ATG4B-203ENST00000400772 WASLO00401 505 aaPredicted RBP22.94■■□□□ 1.26
ATG4B-203ENST00000400772 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
ATG4B-203ENST00000400772 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
ATG4B-203ENST00000400772 PMFBP1Q8TBY8 1022 aa22.92■■□□□ 1.26
ATG4B-203ENST00000400772 NGLY1Q96IV0 654 aa22.9■■□□□ 1.26
ATG4B-203ENST00000400772 RXRBP28702 533 aa22.89■■□□□ 1.25
ATG4B-203ENST00000400772 PSME1Q06323 249 aa22.89■■□□□ 1.25
ATG4B-203ENST00000400772 TULP4Q9NRJ4 1543 aa22.88■■□□□ 1.25
ATG4B-203ENST00000400772 FNBP4Q8N3X1 1017 aaPredicted RBP22.87■■□□□ 1.25
ATG4B-203ENST00000400772 QTRT2Q9H974 415 aaKnown RBP22.87■■□□□ 1.25
ATG4B-203ENST00000400772 SBNO1A3KN83 1393 aa22.87■■□□□ 1.25
ATG4B-203ENST00000400772 EIF3AQ14152 1382 aaKnown RBP22.87■■□□□ 1.25
ATG4B-203ENST00000400772 TNS3Q68CZ2 1445 aa22.85■■□□□ 1.25
ATG4B-203ENST00000400772 CDK19Q9BWU1 502 aa22.85■■□□□ 1.25
ATG4B-203ENST00000400772 NUDT16Q96DE0 195 aaKnown RBP22.84■■□□□ 1.25
ATG4B-203ENST00000400772 USP21Q9UK80 565 aa22.83■■□□□ 1.25
ATG4B-203ENST00000400772 ATP7BP35670 1465 aa22.81■■□□□ 1.24
ATG4B-203ENST00000400772 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
ATG4B-203ENST00000400772 CABLES1Q8TDN4 633 aa22.81■■□□□ 1.24
ATG4B-203ENST00000400772 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
ATG4B-203ENST00000400772 CENPJQ9HC77 1338 aaPredicted RBP22.8■■□□□ 1.24
ATG4B-203ENST00000400772 CDK12Q9NYV4 1490 aaPredicted RBP22.79■■□□□ 1.24
ATG4B-203ENST00000400772 LMOD2Q6P5Q4 547 aa22.79■■□□□ 1.24
ATG4B-203ENST00000400772 BCL9LQ86UU0 1499 aa22.79■■□□□ 1.24
ATG4B-203ENST00000400772 ARHGEF10O15013 1369 aa22.78■■□□□ 1.24
ATG4B-203ENST00000400772 GPRASP1Q5JY77 1395 aa22.78■■□□□ 1.24
ATG4B-203ENST00000400772 NGDNQ8NEJ9 315 aaKnown RBP22.78■■□□□ 1.24
ATG4B-203ENST00000400772 TRPM3Q9HCF6 1732 aaPredicted RBP22.78■■□□□ 1.24
ATG4B-203ENST00000400772 TRPC5Q9UL62 973 aaPredicted RBP22.78■■□□□ 1.24
ATG4B-203ENST00000400772 MARF1Q9Y4F3 1742 aaKnown RBP22.78■■□□□ 1.24
ATG4B-203ENST00000400772 TRPM1Q7Z4N2 1603 aa22.78■■□□□ 1.24
ATG4B-203ENST00000400772 ATRNO75882 1429 aa22.76■■□□□ 1.23
ATG4B-203ENST00000400772 PLEKHG5O94827 1062 aa22.76■■□□□ 1.23
ATG4B-203ENST00000400772 CCDC61Q9Y6R9 512 aa22.76■■□□□ 1.23
ATG4B-203ENST00000400772 RGS12O14924 1447 aa22.74■■□□□ 1.23
ATG4B-203ENST00000400772 PLEKHG3A1L390 1219 aa22.74■■□□□ 1.23
ATG4B-203ENST00000400772 ROCK2O75116 1388 aaKnown RBP22.74■■□□□ 1.23
ATG4B-203ENST00000400772 SLIT2O94813 1529 aa22.73■■□□□ 1.23
ATG4B-203ENST00000400772 CABP2Q9NPB3 220 aa22.73■■□□□ 1.23
ATG4B-203ENST00000400772 ALS2Q96Q42 1657 aa22.73■■□□□ 1.23
ATG4B-203ENST00000400772 ITSN1Q15811 1721 aa22.72■■□□□ 1.23
ATG4B-203ENST00000400772 HAP1P54257 671 aaPredicted RBP22.72■■□□□ 1.23
ATG4B-203ENST00000400772 ACEP12821 1306 aa22.72■■□□□ 1.23
ATG4B-203ENST00000400772 POLR3AO14802 1390 aaPredicted RBP22.72■■□□□ 1.23
ATG4B-203ENST00000400772 TOPAZ1Q8N9V7 1692 aa22.71■■□□□ 1.23
ATG4B-203ENST00000400772 SRPK2P78362 688 aaKnown RBP22.71■■□□□ 1.23
ATG4B-203ENST00000400772 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
ATG4B-203ENST00000400772 PAK3O75914 559 aaPredicted RBP22.7■■□□□ 1.22
ATG4B-203ENST00000400772 QRICH2Q9H0J4 1663 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms