RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
VAPA-202ENST00000400000 CCDC18Q5T9S5 1454 aa16.71■□□□□ 0.27
VAPA-202ENST00000400000 E9PSI1 815 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 EPS15P42566 896 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 ABTB2Q8N961 1025 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 CCDC47Q96A33 483 aaKnown RBP16.7■□□□□ 0.26
VAPA-202ENST00000400000 NLRP6P59044 892 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 PAF1Q8N7H5 531 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 SMC3Q9UQE7 1217 aa16.7■□□□□ 0.26
VAPA-202ENST00000400000 WIZO95785 1651 aa16.69■□□□□ 0.26
VAPA-202ENST00000400000 SF3B2Q13435 895 aaKnown RBP16.69■□□□□ 0.26
VAPA-202ENST00000400000 IPO7O95373 1038 aaKnown RBP16.68■□□□□ 0.26
VAPA-202ENST00000400000 BRPF1P55201 1214 aaPredicted RBP16.68■□□□□ 0.26
VAPA-202ENST00000400000 SETQ01105 290 aaPredicted RBP16.68■□□□□ 0.26
VAPA-202ENST00000400000 HSP90AB2PQ58FF8 381 aa16.68■□□□□ 0.26
VAPA-202ENST00000400000 DZIP1LQ8IYY4 767 aaKnown RBP16.68■□□□□ 0.26
VAPA-202ENST00000400000 LRRFIP1Q32MZ4 808 aaKnown RBP16.68■□□□□ 0.26
VAPA-202ENST00000400000 RBM5P52756 815 aaKnown RBP eCLIP16.67■□□□□ 0.26
VAPA-202ENST00000400000 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
VAPA-202ENST00000400000 RALYLQ86SE5 291 aaKnown RBP16.67■□□□□ 0.26
VAPA-202ENST00000400000 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
VAPA-202ENST00000400000 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
VAPA-202ENST00000400000 SASS6Q6UVJ0 657 aa16.66■□□□□ 0.26
VAPA-202ENST00000400000 ATP6V1DQ9Y5K8 247 aa16.66■□□□□ 0.26
VAPA-202ENST00000400000 ANKRD20A12PQ8NF67 263 aa16.66■□□□□ 0.26
VAPA-202ENST00000400000 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
VAPA-202ENST00000400000 SIL1Q9H173 461 aa16.66■□□□□ 0.26
VAPA-202ENST00000400000 PTPRGP23470 1445 aa16.66■□□□□ 0.26
VAPA-202ENST00000400000 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
VAPA-202ENST00000400000 USP47Q96K76 1375 aa16.65■□□□□ 0.26
VAPA-202ENST00000400000 RNF214Q8ND24 703 aa16.65■□□□□ 0.26
VAPA-202ENST00000400000 PIBF1Q8WXW3 757 aa16.65■□□□□ 0.26
VAPA-202ENST00000400000 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
VAPA-202ENST00000400000 IFT57Q9NWB7 429 aa16.64■□□□□ 0.25
VAPA-202ENST00000400000 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
VAPA-202ENST00000400000 STK3Q13188 491 aa16.64■□□□□ 0.25
VAPA-202ENST00000400000 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
VAPA-202ENST00000400000 MYL6BP14649 208 aa16.63■□□□□ 0.25
VAPA-202ENST00000400000 MPNDQ8N594 471 aa16.63■□□□□ 0.25
VAPA-202ENST00000400000 REC8O95072 547 aa16.63■□□□□ 0.25
VAPA-202ENST00000400000 SAFBQ15424 915 aaKnown RBP eCLIP16.63■□□□□ 0.25
VAPA-202ENST00000400000 FSD1Q9BTV5 496 aa16.63■□□□□ 0.25
VAPA-202ENST00000400000 CHMP4BP1P59074 171 aa16.63■□□□□ 0.25
VAPA-202ENST00000400000 DDX19BQ9UMR2 479 aa16.63■□□□□ 0.25
VAPA-202ENST00000400000 UBTFL1P0CB47 393 aaPredicted RBP16.62■□□□□ 0.25
VAPA-202ENST00000400000 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
VAPA-202ENST00000400000 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
VAPA-202ENST00000400000 ZHX3Q9H4I2 956 aa16.62■□□□□ 0.25
VAPA-202ENST00000400000 KIF6Q6ZMV9 814 aa16.61■□□□□ 0.25
VAPA-202ENST00000400000 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
VAPA-202ENST00000400000 HOOK1Q9UJC3 728 aaKnown RBP16.61■□□□□ 0.25
VAPA-202ENST00000400000 OFD1O75665 1012 aa16.6■□□□□ 0.25
VAPA-202ENST00000400000 CNNM1Q9NRU3 951 aa16.6■□□□□ 0.25
VAPA-202ENST00000400000 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
VAPA-202ENST00000400000 GSE1Q14687 1217 aa16.6■□□□□ 0.25
VAPA-202ENST00000400000 TOM1L2Q6ZVM7 507 aa16.59■□□□□ 0.25
VAPA-202ENST00000400000 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
VAPA-202ENST00000400000 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
VAPA-202ENST00000400000 INTS3Q68E01 1043 aaKnown RBP16.59■□□□□ 0.25
VAPA-202ENST00000400000 RUFY1Q96T51 708 aa16.59■□□□□ 0.25
VAPA-202ENST00000400000 UACAQ9BZF9 1416 aa16.58■□□□□ 0.25
VAPA-202ENST00000400000 TTC39AQ5SRH9 613 aa16.58■□□□□ 0.24
VAPA-202ENST00000400000 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.24
VAPA-202ENST00000400000 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
VAPA-202ENST00000400000 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
VAPA-202ENST00000400000 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
VAPA-202ENST00000400000 CCDC73Q6ZRK6 1079 aa16.57■□□□□ 0.24
VAPA-202ENST00000400000 GPS2Q13227 327 aa16.57■□□□□ 0.24
VAPA-202ENST00000400000 MYCNP04198 464 aaPredicted RBP16.57■□□□□ 0.24
VAPA-202ENST00000400000 API5Q9BZZ5 524 aaKnown RBP16.57■□□□□ 0.24
VAPA-202ENST00000400000 ERC2O15083 957 aa16.57■□□□□ 0.24
VAPA-202ENST00000400000 SMC2O95347 1197 aa16.56■□□□□ 0.24
VAPA-202ENST00000400000 KRT18P05783 430 aaKnown RBP16.56■□□□□ 0.24
VAPA-202ENST00000400000 BRMS1Q9HCU9 246 aa16.56■□□□□ 0.24
VAPA-202ENST00000400000 RSPH4AQ5TD94 716 aa16.56■□□□□ 0.24
VAPA-202ENST00000400000 CDK5RAP3Q96JB5 506 aa16.56■□□□□ 0.24
VAPA-202ENST00000400000 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
VAPA-202ENST00000400000 OLFM4Q6UX06 510 aa16.55■□□□□ 0.24
VAPA-202ENST00000400000 SDF4Q9BRK5 362 aa16.55■□□□□ 0.24
VAPA-202ENST00000400000 SPC24Q8NBT2 197 aa16.54■□□□□ 0.24
VAPA-202ENST00000400000 SKOR2Q2VWA4 1001 aaPredicted RBP16.54■□□□□ 0.24
VAPA-202ENST00000400000 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
VAPA-202ENST00000400000 PAXIP1Q6ZW49 1069 aaPredicted RBP16.53■□□□□ 0.24
VAPA-202ENST00000400000 MNS1Q8NEH6 495 aa16.53■□□□□ 0.24
VAPA-202ENST00000400000 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
VAPA-202ENST00000400000 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
VAPA-202ENST00000400000 MTHFSP49914 203 aa16.53■□□□□ 0.24
VAPA-202ENST00000400000 CABP4P57796 275 aa16.53■□□□□ 0.24
VAPA-202ENST00000400000 TSR2Q969E8 191 aaKnown RBP16.53■□□□□ 0.24
VAPA-202ENST00000400000 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
VAPA-202ENST00000400000 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
VAPA-202ENST00000400000 RUSC2Q8N2Y8 1516 aa16.52■□□□□ 0.23
VAPA-202ENST00000400000 CDCA7LQ96GN5 454 aa16.52■□□□□ 0.23
VAPA-202ENST00000400000 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
VAPA-202ENST00000400000 GNAI1P63096 354 aa16.51■□□□□ 0.23
VAPA-202ENST00000400000 AFAP1Q8N556 730 aa16.51■□□□□ 0.23
VAPA-202ENST00000400000 PRAM1Q96QH2 718 aa16.51■□□□□ 0.23
VAPA-202ENST00000400000 SLC26A8Q96RN1 970 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms