RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 EIF3JO75822 258 aaKnown RBP16.4■□□□□ 0.22
DDX3X-201ENST00000399959 CPLX1O14810 134 aa16.4■□□□□ 0.22
DDX3X-201ENST00000399959 NEK4P51957 841 aa16.4■□□□□ 0.22
DDX3X-201ENST00000399959 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
DDX3X-201ENST00000399959 DHX8Q14562 1220 aaKnown RBP16.4■□□□□ 0.22
DDX3X-201ENST00000399959 SKIDA1Q1XH10 827 aa16.4■□□□□ 0.22
DDX3X-201ENST00000399959 FIBPO43427 364 aa16.39■□□□□ 0.21
DDX3X-201ENST00000399959 AKAP17AQ02040 695 aaKnown RBP16.39■□□□□ 0.21
DDX3X-201ENST00000399959 XPCQ01831 940 aaPredicted RBP16.39■□□□□ 0.21
DDX3X-201ENST00000399959 ERLIN1O75477 346 aa16.37■□□□□ 0.21
DDX3X-201ENST00000399959 CCDC144AA2RUR9 1427 aa16.37■□□□□ 0.21
DDX3X-201ENST00000399959 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
DDX3X-201ENST00000399959 SYNE3Q6ZMZ3 975 aa16.37■□□□□ 0.21
DDX3X-201ENST00000399959 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
DDX3X-201ENST00000399959 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
DDX3X-201ENST00000399959 KINO60870 393 aaKnown RBP16.37■□□□□ 0.21
DDX3X-201ENST00000399959 CLCN1P35523 988 aa16.37■□□□□ 0.21
DDX3X-201ENST00000399959 NAP1L1P55209 391 aaKnown RBP16.37■□□□□ 0.21
DDX3X-201ENST00000399959 PLCD4Q9BRC7 762 aa16.36■□□□□ 0.21
DDX3X-201ENST00000399959 FOSBP53539 338 aa16.36■□□□□ 0.21
DDX3X-201ENST00000399959 TTLL5Q6EMB2 1281 aa16.36■□□□□ 0.21
DDX3X-201ENST00000399959 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
DDX3X-201ENST00000399959 IFIT2P09913 472 aaKnown RBP16.36■□□□□ 0.21
DDX3X-201ENST00000399959 RIPK4P57078 832 aa16.36■□□□□ 0.21
DDX3X-201ENST00000399959 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
DDX3X-201ENST00000399959 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
DDX3X-201ENST00000399959 MARCH6O60337 910 aa16.35■□□□□ 0.21
DDX3X-201ENST00000399959 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
DDX3X-201ENST00000399959 WDR33Q9C0J8 1336 aaKnown RBP16.34■□□□□ 0.21
DDX3X-201ENST00000399959 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
DDX3X-201ENST00000399959 GIMAP7Q8NHV1 300 aa16.33■□□□□ 0.21
DDX3X-201ENST00000399959 SYCE3A1L190 88 aa16.33■□□□□ 0.2
DDX3X-201ENST00000399959 PDCP20941 246 aa16.33■□□□□ 0.2
DDX3X-201ENST00000399959 TNMDQ9H2S6 317 aa16.33■□□□□ 0.2
DDX3X-201ENST00000399959 UACAQ9BZF9 1416 aa16.33■□□□□ 0.2
DDX3X-201ENST00000399959 NINLQ9Y2I6 1382 aa16.33■□□□□ 0.2
DDX3X-201ENST00000399959 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
DDX3X-201ENST00000399959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX3X-201ENST00000399959 FMNL2Q96PY5 1086 aa16.32■□□□□ 0.2
DDX3X-201ENST00000399959 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
DDX3X-201ENST00000399959 CCDC9Q9Y3X0 531 aaKnown RBP16.32■□□□□ 0.2
DDX3X-201ENST00000399959 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX3X-201ENST00000399959 LRRFIP1Q32MZ4 808 aaKnown RBP16.32■□□□□ 0.2
DDX3X-201ENST00000399959 GCC1Q96CN9 775 aa16.31■□□□□ 0.2
DDX3X-201ENST00000399959 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
DDX3X-201ENST00000399959 C11orf95C9JLR9 678 aaPredicted RBP16.31■□□□□ 0.2
DDX3X-201ENST00000399959 PSMA5P28066 241 aa16.31■□□□□ 0.2
DDX3X-201ENST00000399959 SMARCE1Q969G3 411 aa16.31■□□□□ 0.2
DDX3X-201ENST00000399959 UBXN4Q92575 508 aa16.31■□□□□ 0.2
DDX3X-201ENST00000399959 ERC2O15083 957 aa16.31■□□□□ 0.2
DDX3X-201ENST00000399959 MCM5P33992 734 aa16.31■□□□□ 0.2
DDX3X-201ENST00000399959 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
DDX3X-201ENST00000399959 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
DDX3X-201ENST00000399959 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
DDX3X-201ENST00000399959 BCAR3O75815 825 aa16.29■□□□□ 0.2
DDX3X-201ENST00000399959 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
DDX3X-201ENST00000399959 CCDC102AQ96A19 550 aa16.28■□□□□ 0.2
DDX3X-201ENST00000399959 GGT6Q6P531 493 aa16.28■□□□□ 0.2
DDX3X-201ENST00000399959 GOLGA6L7A0A1B0GV03 622 aa16.28■□□□□ 0.2
DDX3X-201ENST00000399959 KIF2AO00139 706 aaPredicted RBP16.28■□□□□ 0.2
DDX3X-201ENST00000399959 HSP90AB4PQ58FF6 505 aa16.27■□□□□ 0.2
DDX3X-201ENST00000399959 TIGD1Q96MW7 591 aa16.27■□□□□ 0.2
DDX3X-201ENST00000399959 MIA2Q96PC5 1412 aa16.27■□□□□ 0.2
DDX3X-201ENST00000399959 GNAI1P63096 354 aa16.27■□□□□ 0.2
DDX3X-201ENST00000399959 SERPINC1P01008 464 aa16.27■□□□□ 0.19
DDX3X-201ENST00000399959 SAFBQ15424 915 aaKnown RBP eCLIP16.27■□□□□ 0.19
DDX3X-201ENST00000399959 FILIP1LQ4L180 1135 aa16.27■□□□□ 0.19
DDX3X-201ENST00000399959 MYO6Q9UM54 1294 aa16.27■□□□□ 0.19
DDX3X-201ENST00000399959 HOMEZQ8IX15 550 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 GPATCH11Q8N954 259 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 NACADO15069 1562 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 GOLGA6L10A6NI86 522 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 TRDNQ13061 729 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 C9orf78Q9NZ63 289 aaPredicted RBP16.26■□□□□ 0.19
DDX3X-201ENST00000399959 FAM177A1Q8N128 213 aaPredicted RBP16.26■□□□□ 0.19
DDX3X-201ENST00000399959 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 CENPHQ9H3R5 247 aa16.26■□□□□ 0.19
DDX3X-201ENST00000399959 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
DDX3X-201ENST00000399959 KRT85P78386 507 aa16.25■□□□□ 0.19
DDX3X-201ENST00000399959 ZNF396Q96N95 335 aaPredicted RBP16.25■□□□□ 0.19
DDX3X-201ENST00000399959 CNTROBQ8N137 903 aa16.25■□□□□ 0.19
DDX3X-201ENST00000399959 PRIMPOLQ96LW4 560 aa16.25■□□□□ 0.19
DDX3X-201ENST00000399959 HNRNPMP52272 730 aaKnown RBP eCLIP16.25■□□□□ 0.195e-7■■■■□ 26.4
DDX3X-201ENST00000399959 AMPHP49418 695 aa16.25■□□□□ 0.19
DDX3X-201ENST00000399959 GTF2F1P35269 517 aaKnown RBP eCLIP16.24■□□□□ 0.194e-7■■■■■ 30.9
DDX3X-201ENST00000399959 NBPF1Q3BBV0 1214 aa16.24■□□□□ 0.19
DDX3X-201ENST00000399959 NUP62CLQ9H1M0 184 aa16.24■□□□□ 0.19
DDX3X-201ENST00000399959 FKBP5Q13451 457 aaPredicted RBP16.24■□□□□ 0.19
DDX3X-201ENST00000399959 FILIP1Q7Z7B0 1213 aa16.24■□□□□ 0.19
DDX3X-201ENST00000399959 DNAJC2Q99543 621 aaKnown RBP16.24■□□□□ 0.19
DDX3X-201ENST00000399959 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
DDX3X-201ENST00000399959 G3BP1Q13283 466 aaKnown RBP eCLIP16.23■□□□□ 0.198e-7■■□□□ 12.9
DDX3X-201ENST00000399959 NFXL1Q6ZNB6 911 aa16.23■□□□□ 0.19
DDX3X-201ENST00000399959 NOL10Q9BSC4 688 aaKnown RBP16.23■□□□□ 0.19
DDX3X-201ENST00000399959 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
DDX3X-201ENST00000399959 CBFA2T2O43439 604 aa16.23■□□□□ 0.19
DDX3X-201ENST00000399959 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
DDX3X-201ENST00000399959 KIF18AQ8NI77 898 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms