RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 CCDC146Q8IYE0 955 aa20.59■□□□□ 0.89
NPRL3-201ENST00000399953 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
NPRL3-201ENST00000399953 APAF1O14727 1248 aa20.58■□□□□ 0.89
NPRL3-201ENST00000399953 KIAA2012Q0VF49 1180 aa20.58■□□□□ 0.88
NPRL3-201ENST00000399953 CAVIN1Q6NZI2 390 aaKnown RBP20.57■□□□□ 0.88
NPRL3-201ENST00000399953 CDK11BP21127 795 aaKnown RBP20.57■□□□□ 0.88
NPRL3-201ENST00000399953 DNTTIP2Q5QJE6 756 aaKnown RBP20.56■□□□□ 0.88
NPRL3-201ENST00000399953 SHROOM2Q13796 1616 aa20.55■□□□□ 0.88
NPRL3-201ENST00000399953 NGEFQ8N5V2 710 aa20.55■□□□□ 0.88
NPRL3-201ENST00000399953 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
NPRL3-201ENST00000399953 CDK13Q14004 1512 aaKnown RBP20.55■□□□□ 0.88
NPRL3-201ENST00000399953 PRIM1P49642 420 aaKnown RBP20.55■□□□□ 0.88
NPRL3-201ENST00000399953 FOXD4L1Q9NU39 408 aa20.55■□□□□ 0.88
NPRL3-201ENST00000399953 CGNQ9P2M7 1197 aaKnown RBP20.55■□□□□ 0.88
NPRL3-201ENST00000399953 ZNF644Q9H582 1327 aaPredicted RBP20.55■□□□□ 0.88
NPRL3-201ENST00000399953 FBLN2P98095 1184 aa20.54■□□□□ 0.88
NPRL3-201ENST00000399953 ERBINQ96RT1 1412 aa20.54■□□□□ 0.88
NPRL3-201ENST00000399953 TESK2Q96S53 571 aa20.54■□□□□ 0.88
NPRL3-201ENST00000399953 JARID2Q92833 1246 aaPredicted RBP20.54■□□□□ 0.88
NPRL3-201ENST00000399953 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
NPRL3-201ENST00000399953 K7ELQ4 463 aaPredicted RBP20.53■□□□□ 0.88
NPRL3-201ENST00000399953 TSC1Q92574 1164 aa20.53■□□□□ 0.88
NPRL3-201ENST00000399953 RSPH4AQ5TD94 716 aa20.52■□□□□ 0.88
NPRL3-201ENST00000399953 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
NPRL3-201ENST00000399953 PRAG1Q86YV5 1406 aa20.52■□□□□ 0.88
NPRL3-201ENST00000399953 KDM5DQ9BY66 1539 aa20.52■□□□□ 0.88
NPRL3-201ENST00000399953 RLBP1P12271 317 aa20.52■□□□□ 0.88
NPRL3-201ENST00000399953 TMF1P82094 1093 aa20.51■□□□□ 0.87
NPRL3-201ENST00000399953 PLCD3Q8N3E9 789 aa20.51■□□□□ 0.87
NPRL3-201ENST00000399953 KIF3AQ9Y496 699 aa20.51■□□□□ 0.87
NPRL3-201ENST00000399953 LAMC1P11047 1609 aa20.51■□□□□ 0.87
NPRL3-201ENST00000399953 KNSTRNQ9Y448 316 aa20.51■□□□□ 0.87
NPRL3-201ENST00000399953 GPRASP1Q5JY77 1395 aa20.51■□□□□ 0.87
NPRL3-201ENST00000399953 NBPF1Q3BBV0 1214 aa20.51■□□□□ 0.87
NPRL3-201ENST00000399953 PRDM15P57071 1507 aaPredicted RBP20.5■□□□□ 0.87
NPRL3-201ENST00000399953 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
NPRL3-201ENST00000399953 RARSP54136 660 aaKnown RBP20.49■□□□□ 0.87
NPRL3-201ENST00000399953 PAXIP1Q6ZW49 1069 aaPredicted RBP20.49■□□□□ 0.87
NPRL3-201ENST00000399953 PDCL2Q8N4E4 241 aa20.49■□□□□ 0.87
NPRL3-201ENST00000399953 ADGRL2O95490 1459 aa20.49■□□□□ 0.87
NPRL3-201ENST00000399953 SPDYE4A6NLX3 237 aa20.49■□□□□ 0.87
NPRL3-201ENST00000399953 PTMAP06454 111 aaKnown RBP20.49■□□□□ 0.87
NPRL3-201ENST00000399953 ZNF771Q7L3S4 317 aaPredicted RBP20.48■□□□□ 0.87
NPRL3-201ENST00000399953 LMBRD1Q9NUN5 540 aa20.48■□□□□ 0.87
NPRL3-201ENST00000399953 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
NPRL3-201ENST00000399953 FTSJ3Q8IY81 847 aaKnown RBP20.47■□□□□ 0.87
NPRL3-201ENST00000399953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.47■□□□□ 0.874e-8■■□□□ 12.4
NPRL3-201ENST00000399953 ZBTB22O15209 634 aa20.47■□□□□ 0.87
NPRL3-201ENST00000399953 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
NPRL3-201ENST00000399953 LRSAM1Q6UWE0 723 aa20.47■□□□□ 0.87
NPRL3-201ENST00000399953 ITSN2Q9NZM3 1697 aa20.47■□□□□ 0.87
NPRL3-201ENST00000399953 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
NPRL3-201ENST00000399953 KIF2CQ99661 725 aa20.46■□□□□ 0.87
NPRL3-201ENST00000399953 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
NPRL3-201ENST00000399953 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
NPRL3-201ENST00000399953 AK9Q5TCS8 1911 aa20.46■□□□□ 0.87
NPRL3-201ENST00000399953 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
NPRL3-201ENST00000399953 AMER1Q5JTC6 1135 aaPredicted RBP20.45■□□□□ 0.86
NPRL3-201ENST00000399953 PIBF1Q8WXW3 757 aa20.45■□□□□ 0.86
NPRL3-201ENST00000399953 NUP155O75694 1391 aa20.45■□□□□ 0.86
NPRL3-201ENST00000399953 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
NPRL3-201ENST00000399953 IGSF3O75054 1194 aa20.44■□□□□ 0.86
NPRL3-201ENST00000399953 NUCB2P80303 420 aa20.44■□□□□ 0.86
NPRL3-201ENST00000399953 PDS5BQ9NTI5 1447 aa20.43■□□□□ 0.86
NPRL3-201ENST00000399953 MVPQ14764 893 aaKnown RBP20.43■□□□□ 0.86
NPRL3-201ENST00000399953 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
NPRL3-201ENST00000399953 FEZ1Q99689 392 aa20.42■□□□□ 0.86
NPRL3-201ENST00000399953 WDR7Q9Y4E6 1490 aa20.42■□□□□ 0.86
NPRL3-201ENST00000399953 VGFO15240 615 aaPredicted RBP20.42■□□□□ 0.86
NPRL3-201ENST00000399953 IRX5P78411 483 aaPredicted RBP20.42■□□□□ 0.86
NPRL3-201ENST00000399953 NOLC1Q14978 699 aaKnown RBP eCLIP20.42■□□□□ 0.86
NPRL3-201ENST00000399953 WWC1Q8IX03 1113 aa20.42■□□□□ 0.86
NPRL3-201ENST00000399953 CROCC2H7BZ55 1655 aa20.42■□□□□ 0.86
NPRL3-201ENST00000399953 WDR62O43379 1518 aa20.42■□□□□ 0.86
NPRL3-201ENST00000399953 HDAC1Q13547 482 aaPredicted RBP20.41■□□□□ 0.86
NPRL3-201ENST00000399953 SLC20A2Q08357 652 aa20.41■□□□□ 0.86
NPRL3-201ENST00000399953 RBM27Q9P2N5 1060 aaKnown RBP20.41■□□□□ 0.86
NPRL3-201ENST00000399953 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
NPRL3-201ENST00000399953 U2AF2P26368 475 aaKnown RBP eCLIP20.4■□□□□ 0.86
NPRL3-201ENST00000399953 KIF16BQ96L93 1317 aa20.4■□□□□ 0.86
NPRL3-201ENST00000399953 ASXL1Q8IXJ9 1541 aa20.4■□□□□ 0.86
NPRL3-201ENST00000399953 GABPB1Q06547 395 aaPredicted RBP20.4■□□□□ 0.86
NPRL3-201ENST00000399953 GRIN2AQ12879 1464 aa20.39■□□□□ 0.86
NPRL3-201ENST00000399953 ABCC10Q5T3U5 1492 aa20.39■□□□□ 0.86
NPRL3-201ENST00000399953 GPT2Q8TD30 523 aa20.39■□□□□ 0.85
NPRL3-201ENST00000399953 SYCE3A1L190 88 aa20.39■□□□□ 0.85
NPRL3-201ENST00000399953 ANKRD7Q92527 254 aa20.38■□□□□ 0.85
NPRL3-201ENST00000399953 CYP2E1P05181 493 aaPredicted RBP20.38■□□□□ 0.85
NPRL3-201ENST00000399953 DNAJC2Q99543 621 aaKnown RBP20.38■□□□□ 0.85
NPRL3-201ENST00000399953 OGFRQ9NZT2 677 aa20.38■□□□□ 0.85
NPRL3-201ENST00000399953 PRPF40AO75400 957 aaKnown RBP20.37■□□□□ 0.85
NPRL3-201ENST00000399953 KCNJ4P48050 445 aa20.37■□□□□ 0.85
NPRL3-201ENST00000399953 FKBP5Q13451 457 aaPredicted RBP20.37■□□□□ 0.85
NPRL3-201ENST00000399953 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
NPRL3-201ENST00000399953 CCDC66A2RUB6 948 aa20.36■□□□□ 0.85
NPRL3-201ENST00000399953 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
NPRL3-201ENST00000399953 TMEM63CQ9P1W3 806 aa20.36■□□□□ 0.85
NPRL3-201ENST00000399953 RNF214Q8ND24 703 aa20.36■□□□□ 0.85
NPRL3-201ENST00000399953 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
NPRL3-201ENST00000399953 SPTLC3Q9NUV7 552 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms