RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 LRRIQ1Q96JM4 1722 aa17.79■□□□□ 0.44
SCAF4-202ENST00000399804 CENPQQ7L2Z9 268 aaPredicted RBP17.79■□□□□ 0.44
SCAF4-202ENST00000399804 CDC42BPAQ5VT25 1732 aa17.79■□□□□ 0.44
SCAF4-202ENST00000399804 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
SCAF4-202ENST00000399804 SLC4A10Q6U841 1118 aa17.78■□□□□ 0.44
SCAF4-202ENST00000399804 RRS1Q15050 365 aaKnown RBP17.78■□□□□ 0.44
SCAF4-202ENST00000399804 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
SCAF4-202ENST00000399804 BCAR3O75815 825 aa17.77■□□□□ 0.44
SCAF4-202ENST00000399804 ABCC1P33527 1531 aa17.77■□□□□ 0.44
SCAF4-202ENST00000399804 WASLO00401 505 aaPredicted RBP17.77■□□□□ 0.44
SCAF4-202ENST00000399804 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
SCAF4-202ENST00000399804 TSR2Q969E8 191 aaKnown RBP17.76■□□□□ 0.43
SCAF4-202ENST00000399804 CFAP65Q6ZU64 1925 aaKnown RBP17.76■□□□□ 0.43
SCAF4-202ENST00000399804 DZIP1LQ8IYY4 767 aaKnown RBP17.75■□□□□ 0.43
SCAF4-202ENST00000399804 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
SCAF4-202ENST00000399804 PARD3Q8TEW0 1356 aa17.75■□□□□ 0.43
SCAF4-202ENST00000399804 TNRQ92752 1358 aa17.75■□□□□ 0.43
SCAF4-202ENST00000399804 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
SCAF4-202ENST00000399804 NEO1Q92859 1461 aa17.75■□□□□ 0.43
SCAF4-202ENST00000399804 EXOSC9Q06265 439 aaKnown RBP17.74■□□□□ 0.43
SCAF4-202ENST00000399804 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
SCAF4-202ENST00000399804 ADCY10Q96PN6 1610 aa17.74■□□□□ 0.43
SCAF4-202ENST00000399804 GNAI1P63096 354 aa17.74■□□□□ 0.43
SCAF4-202ENST00000399804 PROSER2Q86WR7 435 aaPredicted RBP17.74■□□□□ 0.43
SCAF4-202ENST00000399804 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
SCAF4-202ENST00000399804 NME9Q86XW9 330 aa17.74■□□□□ 0.43
SCAF4-202ENST00000399804 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
SCAF4-202ENST00000399804 OS9Q13438 667 aaPredicted RBP17.73■□□□□ 0.43
SCAF4-202ENST00000399804 NPATQ14207 1427 aa17.73■□□□□ 0.43
SCAF4-202ENST00000399804 YEATS2Q9ULM3 1422 aa17.73■□□□□ 0.43
SCAF4-202ENST00000399804 PDE4AP27815 886 aa17.73■□□□□ 0.43
SCAF4-202ENST00000399804 SULT6B1Q6IMI4 303 aa17.73■□□□□ 0.43
SCAF4-202ENST00000399804 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
SCAF4-202ENST00000399804 PLA2R1Q13018 1463 aa17.72■□□□□ 0.43
SCAF4-202ENST00000399804 ATP10AO60312 1499 aa17.71■□□□□ 0.43
SCAF4-202ENST00000399804 ATF3P18847 181 aa17.71■□□□□ 0.43
SCAF4-202ENST00000399804 CASC1Q6TDU7 716 aa17.71■□□□□ 0.43
SCAF4-202ENST00000399804 RBM33Q96EV2 1170 aaKnown RBP17.71■□□□□ 0.43
SCAF4-202ENST00000399804 WDR63Q8IWG1 891 aa17.71■□□□□ 0.43
SCAF4-202ENST00000399804 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
SCAF4-202ENST00000399804 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
SCAF4-202ENST00000399804 FBLN1P23142 703 aa17.7■□□□□ 0.42
SCAF4-202ENST00000399804 TMPOP42166 694 aaKnown RBP17.69■□□□□ 0.42
SCAF4-202ENST00000399804 TEFQ10587 303 aa17.69■□□□□ 0.42
SCAF4-202ENST00000399804 DDX19BQ9UMR2 479 aa17.69■□□□□ 0.42
SCAF4-202ENST00000399804 RIMS2Q9UQ26 1411 aa17.69■□□□□ 0.42
SCAF4-202ENST00000399804 EMILIN1Q9Y6C2 1016 aa17.68■□□□□ 0.42
SCAF4-202ENST00000399804 FCHSD2O94868 740 aa17.68■□□□□ 0.42
SCAF4-202ENST00000399804 NECTIN2Q92692 538 aa17.68■□□□□ 0.42
SCAF4-202ENST00000399804 FYB1O15117 783 aa17.68■□□□□ 0.42
SCAF4-202ENST00000399804 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
SCAF4-202ENST00000399804 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
SCAF4-202ENST00000399804 CLASP1Q7Z460 1538 aa17.67■□□□□ 0.42
SCAF4-202ENST00000399804 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
SCAF4-202ENST00000399804 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
SCAF4-202ENST00000399804 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
SCAF4-202ENST00000399804 ASXL1Q8IXJ9 1541 aa17.66■□□□□ 0.42
SCAF4-202ENST00000399804 MLH3Q9UHC1 1453 aa17.64■□□□□ 0.42
SCAF4-202ENST00000399804 ANKRD36BQ8N2N9 1353 aa17.64■□□□□ 0.42
SCAF4-202ENST00000399804 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
SCAF4-202ENST00000399804 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
SCAF4-202ENST00000399804 FANCIQ9NVI1 1328 aa17.64■□□□□ 0.41
SCAF4-202ENST00000399804 EIF2S2P20042 333 aaKnown RBP17.64■□□□□ 0.41
SCAF4-202ENST00000399804 API5Q9BZZ5 524 aaKnown RBP17.64■□□□□ 0.41
SCAF4-202ENST00000399804 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
SCAF4-202ENST00000399804 THUMPD2Q9BTF0 503 aaKnown RBP17.63■□□□□ 0.41
SCAF4-202ENST00000399804 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
SCAF4-202ENST00000399804 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
SCAF4-202ENST00000399804 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
SCAF4-202ENST00000399804 ANKRD45Q5TZF3 282 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 HMMRO75330 724 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 ZNF330Q9Y3S2 320 aaPredicted RBP17.62■□□□□ 0.41
SCAF4-202ENST00000399804 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 PUS7Q96PZ0 661 aaKnown RBP17.62■□□□□ 0.41
SCAF4-202ENST00000399804 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 UGGT1Q9NYU2 1555 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 NSD2O96028 1365 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 NINLQ9Y2I6 1382 aa17.62■□□□□ 0.41
SCAF4-202ENST00000399804 EIF5BO60841 1220 aaKnown RBP17.61■□□□□ 0.41
SCAF4-202ENST00000399804 MFAP1P55081 439 aaKnown RBP17.61■□□□□ 0.41
SCAF4-202ENST00000399804 TWISTNBQ3B726 338 aaPredicted RBP17.6■□□□□ 0.41
SCAF4-202ENST00000399804 PTPRTO14522 1441 aa17.6■□□□□ 0.41
SCAF4-202ENST00000399804 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
SCAF4-202ENST00000399804 NLRP2Q9NX02 1062 aa17.6■□□□□ 0.41
SCAF4-202ENST00000399804 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
SCAF4-202ENST00000399804 SPRYD3Q8NCJ5 442 aa17.59■□□□□ 0.41
SCAF4-202ENST00000399804 ACEP12821 1306 aa17.59■□□□□ 0.41
SCAF4-202ENST00000399804 GAS2L2Q8NHY3 880 aa17.59■□□□□ 0.41
SCAF4-202ENST00000399804 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
SCAF4-202ENST00000399804 FKBP5Q13451 457 aaPredicted RBP17.58■□□□□ 0.4
SCAF4-202ENST00000399804 NCKAP5LQ9HCH0 1330 aa17.58■□□□□ 0.4
SCAF4-202ENST00000399804 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.4
SCAF4-202ENST00000399804 RAPGEF4Q8WZA2 1011 aa17.57■□□□□ 0.4
SCAF4-202ENST00000399804 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
SCAF4-202ENST00000399804 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
SCAF4-202ENST00000399804 DCTN1Q14203 1278 aa17.56■□□□□ 0.4
SCAF4-202ENST00000399804 FOXO3O43524 673 aa17.56■□□□□ 0.4
SCAF4-202ENST00000399804 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
SCAF4-202ENST00000399804 TRPM2O94759 1503 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms