RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 WAPLQ7Z5K2 1190 aa25.18■■□□□ 1.62
CTNS-203ENST00000399306 CDC42BPGQ6DT37 1551 aa25.18■■□□□ 1.62
CTNS-203ENST00000399306 ATF3P18847 181 aa25.17■■□□□ 1.62
CTNS-203ENST00000399306 PRAM1Q96QH2 718 aa25.17■■□□□ 1.62
CTNS-203ENST00000399306 POGKQ9P215 609 aa25.16■■□□□ 1.62
CTNS-203ENST00000399306 PLEKHH1Q9ULM0 1364 aa25.16■■□□□ 1.62
CTNS-203ENST00000399306 ADGRB2O60241 1585 aa25.15■■□□□ 1.62
CTNS-203ENST00000399306 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
CTNS-203ENST00000399306 SLAIN2Q9P270 581 aa25.12■■□□□ 1.61
CTNS-203ENST00000399306 CARD11Q9BXL7 1154 aa25.11■■□□□ 1.61
CTNS-203ENST00000399306 MST1RQ04912 1400 aa25.1■■□□□ 1.61
CTNS-203ENST00000399306 CENPJQ9HC77 1338 aaPredicted RBP25.09■■□□□ 1.61
CTNS-203ENST00000399306 FMN2Q9NZ56 1722 aa25.06■■□□□ 1.6
CTNS-203ENST00000399306 SBNO2Q9Y2G9 1366 aa25.05■■□□□ 1.6
CTNS-203ENST00000399306 C1orf167Q5SNV9 1468 aa25.04■■□□□ 1.6
CTNS-203ENST00000399306 SAFB2Q14151 953 aaKnown RBP eCLIP25.03■■□□□ 1.6
CTNS-203ENST00000399306 QRICH2Q9H0J4 1663 aa25.03■■□□□ 1.6
CTNS-203ENST00000399306 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
CTNS-203ENST00000399306 ROBO1Q9Y6N7 1651 aa25.02■■□□□ 1.6
CTNS-203ENST00000399306 SLC24A1O60721 1099 aa25.02■■□□□ 1.6
CTNS-203ENST00000399306 PIP4K2BP78356 416 aa25.02■■□□□ 1.6
CTNS-203ENST00000399306 WASLO00401 505 aaPredicted RBP25.01■■□□□ 1.59
CTNS-203ENST00000399306 MINK1Q8N4C8 1332 aaPredicted RBP25.01■■□□□ 1.59
CTNS-203ENST00000399306 TULP4Q9NRJ4 1543 aa24.98■■□□□ 1.59
CTNS-203ENST00000399306 ILDR1Q86SU0 546 aaPredicted RBP24.98■■□□□ 1.59
CTNS-203ENST00000399306 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
CTNS-203ENST00000399306 BRINP3Q76B58 766 aa24.97■■□□□ 1.59
CTNS-203ENST00000399306 AHDC1Q5TGY3 1603 aaPredicted RBP24.95■■□□□ 1.58
CTNS-203ENST00000399306 USP47Q96K76 1375 aa24.94■■□□□ 1.58
CTNS-203ENST00000399306 HIRIP3Q9BW71 556 aaPredicted RBP24.94■■□□□ 1.58
CTNS-203ENST00000399306 KIF1AQ12756 1690 aa24.94■■□□□ 1.58
CTNS-203ENST00000399306 EVC2Q86UK5 1308 aa24.93■■□□□ 1.58
CTNS-203ENST00000399306 CDK19Q9BWU1 502 aa24.92■■□□□ 1.58
CTNS-203ENST00000399306 NHSL1Q5SYE7 1610 aa24.92■■□□□ 1.58
CTNS-203ENST00000399306 USP32Q8NFA0 1604 aa24.92■■□□□ 1.58
CTNS-203ENST00000399306 ITSN1Q15811 1721 aa24.91■■□□□ 1.58
CTNS-203ENST00000399306 PUS7Q96PZ0 661 aaKnown RBP24.9■■□□□ 1.58
CTNS-203ENST00000399306 RGPD8O14715 1765 aaPredicted RBP24.9■■□□□ 1.58
CTNS-203ENST00000399306 ATP7BP35670 1465 aa24.89■■□□□ 1.58
CTNS-203ENST00000399306 ST20-MTHFSA0A0A6YYL1 179 aa24.89■■□□□ 1.58
CTNS-203ENST00000399306 ESCO1Q5FWF5 840 aa24.89■■□□□ 1.58
CTNS-203ENST00000399306 ORAI2Q96SN7 254 aa24.89■■□□□ 1.58
CTNS-203ENST00000399306 TESK2Q96S53 571 aa24.88■■□□□ 1.57
CTNS-203ENST00000399306 PRR36Q9H6K5 1346 aa24.86■■□□□ 1.57
CTNS-203ENST00000399306 PHLPP1O60346 1717 aa24.86■■□□□ 1.57
CTNS-203ENST00000399306 TOPAZ1Q8N9V7 1692 aa24.86■■□□□ 1.57
CTNS-203ENST00000399306 HSPA1LP34931 641 aa24.86■■□□□ 1.57
CTNS-203ENST00000399306 NUDT16Q96DE0 195 aaKnown RBP24.86■■□□□ 1.57
CTNS-203ENST00000399306 CCDC61Q9Y6R9 512 aa24.86■■□□□ 1.57
CTNS-203ENST00000399306 NPHP3Q7Z494 1330 aa24.86■■□□□ 1.57
CTNS-203ENST00000399306 PHF8Q9UPP1 1060 aa24.85■■□□□ 1.57
CTNS-203ENST00000399306 NUTM2FA1L443 756 aa24.84■■□□□ 1.57
CTNS-203ENST00000399306 EIF4G2P78344 907 aaKnown RBP eCLIP24.84■■□□□ 1.574e-10■■■■■ 50.6
CTNS-203ENST00000399306 COL16A1Q07092 1604 aaPredicted RBP24.83■■□□□ 1.57
CTNS-203ENST00000399306 ATAD2Q6PL18 1390 aa24.83■■□□□ 1.57
CTNS-203ENST00000399306 SRPK2P78362 688 aaKnown RBP24.83■■□□□ 1.57
CTNS-203ENST00000399306 PLEKHG3A1L390 1219 aa24.82■■□□□ 1.56
CTNS-203ENST00000399306 SOS2Q07890 1332 aaPredicted RBP24.82■■□□□ 1.56
CTNS-203ENST00000399306 ZEB1P37275 1124 aaPredicted RBP24.79■■□□□ 1.56
CTNS-203ENST00000399306 TMF1P82094 1093 aa24.79■■□□□ 1.56
CTNS-203ENST00000399306 CABP2Q9NPB3 220 aa24.79■■□□□ 1.56
CTNS-203ENST00000399306 PXDNQ92626 1479 aa24.78■■□□□ 1.56
CTNS-203ENST00000399306 CDCA8Q53HL2 280 aa24.78■■□□□ 1.56
CTNS-203ENST00000399306 POLR3AO14802 1390 aaPredicted RBP24.78■■□□□ 1.56
CTNS-203ENST00000399306 FOXO3O43524 673 aa24.77■■□□□ 1.56
CTNS-203ENST00000399306 LRRC59Q96AG4 307 aaKnown RBP24.77■■□□□ 1.56
CTNS-203ENST00000399306 PPIP5K1Q6PFW1 1433 aa24.76■■□□□ 1.55
CTNS-203ENST00000399306 PSME1Q06323 249 aa24.75■■□□□ 1.55
CTNS-203ENST00000399306 BRD4O60885 1362 aaPredicted RBP24.75■■□□□ 1.55
CTNS-203ENST00000399306 JCADQ9P266 1359 aa24.75■■□□□ 1.55
CTNS-203ENST00000399306 NINLQ9Y2I6 1382 aa24.75■■□□□ 1.55
CTNS-203ENST00000399306 HSPA5P11021 654 aaKnown RBP24.74■■□□□ 1.55
CTNS-203ENST00000399306 SBNO1A3KN83 1393 aa24.74■■□□□ 1.55
CTNS-203ENST00000399306 SHPRHQ149N8 1683 aa24.73■■□□□ 1.55
CTNS-203ENST00000399306 PMFBP1Q8TBY8 1022 aa24.73■■□□□ 1.55
CTNS-203ENST00000399306 KRT28Q7Z3Y7 464 aa24.72■■□□□ 1.55
CTNS-203ENST00000399306 NGDNQ8NEJ9 315 aaKnown RBP24.72■■□□□ 1.55
CTNS-203ENST00000399306 DDX17Q92841 729 aaKnown RBP24.71■■□□□ 1.55
CTNS-203ENST00000399306 DISP3Q9P2K9 1392 aa24.69■■□□□ 1.54
CTNS-203ENST00000399306 ACEP12821 1306 aa24.69■■□□□ 1.54
CTNS-203ENST00000399306 ZNF692Q9BU19 519 aaPredicted RBP24.69■■□□□ 1.54
CTNS-203ENST00000399306 CABP1Q9NZU7 370 aa24.69■■□□□ 1.54
CTNS-203ENST00000399306 TRPM3Q9HCF6 1732 aaPredicted RBP24.68■■□□□ 1.54
CTNS-203ENST00000399306 SPATA31A6Q5VVP1 1343 aa24.67■■□□□ 1.54
CTNS-203ENST00000399306 SPATA31A3Q5VYP0 1347 aa24.67■■□□□ 1.54
CTNS-203ENST00000399306 COL22A1Q8NFW1 1626 aaPredicted RBP24.66■■□□□ 1.54
CTNS-203ENST00000399306 CPSF1Q10570 1443 aaKnown RBP24.66■■□□□ 1.54
CTNS-203ENST00000399306 TNS3Q68CZ2 1445 aa24.66■■□□□ 1.54
CTNS-203ENST00000399306 PNPLA6Q8IY17 1366 aa24.66■■□□□ 1.54
CTNS-203ENST00000399306 AKAP12Q02952 1782 aa24.65■■□□□ 1.54
CTNS-203ENST00000399306 ARHGEF10O15013 1369 aa24.65■■□□□ 1.54
CTNS-203ENST00000399306 ALS2Q96Q42 1657 aa24.62■■□□□ 1.53
CTNS-203ENST00000399306 USP6P35125 1406 aa24.62■■□□□ 1.53
CTNS-203ENST00000399306 XPCQ01831 940 aaPredicted RBP24.61■■□□□ 1.53
CTNS-203ENST00000399306 TERF2IPQ9NYB0 399 aa24.61■■□□□ 1.53
CTNS-203ENST00000399306 SSH2Q76I76 1423 aa24.61■■□□□ 1.53
CTNS-203ENST00000399306 CD163L1Q9NR16 1453 aa24.6■■□□□ 1.53
CTNS-203ENST00000399306 MON2Q7Z3U7 1717 aa24.6■■□□□ 1.53
CTNS-203ENST00000399306 HDGFL2Q7Z4V5 671 aaPredicted RBP24.59■■□□□ 1.53
CTNS-203ENST00000399306 TMC1Q8TDI8 760 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms