RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 CPLX2Q6PUV4 134 aaKnown RBP23.59■■□□□ 1.37
KDM2A-202ENST00000398645 PKNOX2Q96KN3 472 aa23.59■■□□□ 1.37
KDM2A-202ENST00000398645 FAM193AP78312 1265 aa23.59■■□□□ 1.37
KDM2A-202ENST00000398645 NEXNQ0ZGT2 675 aa23.59■■□□□ 1.37
KDM2A-202ENST00000398645 OLFM4Q6UX06 510 aa23.59■■□□□ 1.37
KDM2A-202ENST00000398645 CCDC39Q9UFE4 941 aa23.59■■□□□ 1.37
KDM2A-202ENST00000398645 STK3Q13188 491 aa23.58■■□□□ 1.37
KDM2A-202ENST00000398645 TSPYL1Q9H0U9 437 aa23.58■■□□□ 1.37
KDM2A-202ENST00000398645 IBSPP21815 317 aaPredicted RBP23.58■■□□□ 1.37
KDM2A-202ENST00000398645 INTS3Q68E01 1043 aaKnown RBP23.58■■□□□ 1.37
KDM2A-202ENST00000398645 EID1Q9Y6B2 187 aa23.58■■□□□ 1.36
KDM2A-202ENST00000398645 AXDND1Q5T1B0 1012 aaPredicted RBP23.57■■□□□ 1.36
KDM2A-202ENST00000398645 DNAJC2Q99543 621 aaKnown RBP23.57■■□□□ 1.36
KDM2A-202ENST00000398645 ANKRD30AQ9BXX3 1397 aa23.57■■□□□ 1.36
KDM2A-202ENST00000398645 ERICH4A6NGS2 130 aa23.57■■□□□ 1.36
KDM2A-202ENST00000398645 RDXP35241 583 aaKnown RBP23.55■■□□□ 1.36
KDM2A-202ENST00000398645 DDX19BQ9UMR2 479 aa23.55■■□□□ 1.36
KDM2A-202ENST00000398645 TRAK2O60296 914 aa23.55■■□□□ 1.36
KDM2A-202ENST00000398645 FANCIQ9NVI1 1328 aa23.55■■□□□ 1.36
KDM2A-202ENST00000398645 PRKRIP1Q9H875 184 aaPredicted RBP23.54■■□□□ 1.36
KDM2A-202ENST00000398645 OFD1O75665 1012 aa23.54■■□□□ 1.36
KDM2A-202ENST00000398645 ANKRD62A6NC57 917 aa23.54■■□□□ 1.36
KDM2A-202ENST00000398645 SDF4Q9BRK5 362 aa23.54■■□□□ 1.36
KDM2A-202ENST00000398645 IKQ13123 557 aaPredicted RBP23.53■■□□□ 1.36
KDM2A-202ENST00000398645 TSPYL4Q9UJ04 414 aa23.53■■□□□ 1.36
KDM2A-202ENST00000398645 C11orf95C9JLR9 678 aaPredicted RBP23.53■■□□□ 1.36
KDM2A-202ENST00000398645 CENPHQ9H3R5 247 aa23.53■■□□□ 1.36
KDM2A-202ENST00000398645 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
KDM2A-202ENST00000398645 RNF20Q5VTR2 975 aa23.52■■□□□ 1.36
KDM2A-202ENST00000398645 PRDM10Q9NQV6 1147 aa23.52■■□□□ 1.36
KDM2A-202ENST00000398645 ZBED9Q6R2W3 1325 aa23.51■■□□□ 1.35
KDM2A-202ENST00000398645 FIBPO43427 364 aa23.51■■□□□ 1.35
KDM2A-202ENST00000398645 TMEM132AQ24JP5 1023 aa23.51■■□□□ 1.35
KDM2A-202ENST00000398645 ACBD3Q9H3P7 528 aa23.51■■□□□ 1.35
KDM2A-202ENST00000398645 FMN1Q68DA7 1419 aa23.51■■□□□ 1.35
KDM2A-202ENST00000398645 TSPY26PQ9H489 355 aa23.5■■□□□ 1.35
KDM2A-202ENST00000398645 RIC3Q7Z5B4 369 aa23.5■■□□□ 1.35
KDM2A-202ENST00000398645 SAFBQ15424 915 aaKnown RBP eCLIP23.5■■□□□ 1.35
KDM2A-202ENST00000398645 CCDC191Q8NCU4 936 aa23.49■■□□□ 1.35
KDM2A-202ENST00000398645 DIAPH1O60610 1272 aaKnown RBP23.49■■□□□ 1.35
KDM2A-202ENST00000398645 CHMP4AQ9BY43 222 aa23.48■■□□□ 1.35
KDM2A-202ENST00000398645 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
KDM2A-202ENST00000398645 RALYLQ86SE5 291 aaKnown RBP23.48■■□□□ 1.35
KDM2A-202ENST00000398645 CDR1P51861 262 aa23.48■■□□□ 1.35
KDM2A-202ENST00000398645 NUCB2P80303 420 aa23.48■■□□□ 1.35
KDM2A-202ENST00000398645 NEFHP12036 1026 aa23.47■■□□□ 1.35
KDM2A-202ENST00000398645 FHOD3Q2V2M9 1422 aa23.46■■□□□ 1.35
KDM2A-202ENST00000398645 USP47Q96K76 1375 aa23.46■■□□□ 1.35
KDM2A-202ENST00000398645 CDCA7LQ96GN5 454 aa23.45■■□□□ 1.34
KDM2A-202ENST00000398645 FSD1Q9BTV5 496 aa23.45■■□□□ 1.34
KDM2A-202ENST00000398645 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
KDM2A-202ENST00000398645 MRE11P49959 708 aa23.43■■□□□ 1.34
KDM2A-202ENST00000398645 LEKR1Q6ZMV7 388 aa23.43■■□□□ 1.34
KDM2A-202ENST00000398645 NAT10Q9H0A0 1025 aaKnown RBP23.43■■□□□ 1.34
KDM2A-202ENST00000398645 CWC15Q9P013 229 aaKnown RBP23.43■■□□□ 1.34
KDM2A-202ENST00000398645 UQCRHLA0A096LP55 91 aa23.43■■□□□ 1.34
KDM2A-202ENST00000398645 UQCRHP07919 91 aa23.43■■□□□ 1.34
KDM2A-202ENST00000398645 ENOX2Q16206 610 aaKnown RBP23.43■■□□□ 1.34
KDM2A-202ENST00000398645 ZHX3Q9H4I2 956 aa23.42■■□□□ 1.34
KDM2A-202ENST00000398645 LRRFIP1Q32MZ4 808 aaKnown RBP23.42■■□□□ 1.34
KDM2A-202ENST00000398645 TAX1BP1Q86VP1 789 aa23.42■■□□□ 1.34
KDM2A-202ENST00000398645 RB1CC1Q8TDY2 1594 aa23.42■■□□□ 1.34
KDM2A-202ENST00000398645 MEX3CQ5U5Q3 659 aaKnown RBP23.42■■□□□ 1.34
KDM2A-202ENST00000398645 PAF1Q8N7H5 531 aa23.42■■□□□ 1.34
KDM2A-202ENST00000398645 PIBF1Q8WXW3 757 aa23.42■■□□□ 1.34
KDM2A-202ENST00000398645 TMX1Q9H3N1 280 aa23.42■■□□□ 1.34
KDM2A-202ENST00000398645 NEK4P51957 841 aa23.41■■□□□ 1.34
KDM2A-202ENST00000398645 CDC45O75419 566 aa23.41■■□□□ 1.34
KDM2A-202ENST00000398645 CT47B1P0C2W7 299 aaPredicted RBP23.41■■□□□ 1.34
KDM2A-202ENST00000398645 ATP2B2Q01814 1243 aa23.41■■□□□ 1.34
KDM2A-202ENST00000398645 EFCAB2Q5VUJ9 269 aa23.4■■□□□ 1.34
KDM2A-202ENST00000398645 SPINK5Q9NQ38 1064 aaPredicted RBP23.4■■□□□ 1.34
KDM2A-202ENST00000398645 GGNBP2Q9H3C7 697 aa23.4■■□□□ 1.34
KDM2A-202ENST00000398645 CCDC173Q0VFZ6 552 aa23.4■■□□□ 1.34
KDM2A-202ENST00000398645 EVC2Q86UK5 1308 aa23.39■■□□□ 1.34
KDM2A-202ENST00000398645 SERPINC1P01008 464 aa23.39■■□□□ 1.33
KDM2A-202ENST00000398645 PSME1Q06323 249 aa23.39■■□□□ 1.33
KDM2A-202ENST00000398645 DCTN1Q14203 1278 aa23.39■■□□□ 1.33
KDM2A-202ENST00000398645 CCDC144AA2RUR9 1427 aa23.38■■□□□ 1.33
KDM2A-202ENST00000398645 SIL1Q9H173 461 aa23.38■■□□□ 1.33
KDM2A-202ENST00000398645 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
KDM2A-202ENST00000398645 BRMS1Q9HCU9 246 aa23.38■■□□□ 1.33
KDM2A-202ENST00000398645 MAGEC2Q9UBF1 373 aaPredicted RBP23.38■■□□□ 1.33
KDM2A-202ENST00000398645 CABP2Q9NPB3 220 aa23.37■■□□□ 1.33
KDM2A-202ENST00000398645 ERC2O15083 957 aa23.37■■□□□ 1.33
KDM2A-202ENST00000398645 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.37■■□□□ 1.33
KDM2A-202ENST00000398645 DDX58O95786 925 aaKnown RBP23.37■■□□□ 1.33
KDM2A-202ENST00000398645 CDK5RAP3Q96JB5 506 aa23.37■■□□□ 1.33
KDM2A-202ENST00000398645 UBTFL1P0CB47 393 aaPredicted RBP23.36■■□□□ 1.33
KDM2A-202ENST00000398645 SEPT11Q9NVA2 429 aaKnown RBP23.36■■□□□ 1.33
KDM2A-202ENST00000398645 API5Q9BZZ5 524 aaKnown RBP23.36■■□□□ 1.33
KDM2A-202ENST00000398645 TANGO6Q9C0B7 1094 aa23.36■■□□□ 1.33
KDM2A-202ENST00000398645 KRT18P05783 430 aaKnown RBP23.36■■□□□ 1.33
KDM2A-202ENST00000398645 CNTROBQ8N137 903 aa23.36■■□□□ 1.33
KDM2A-202ENST00000398645 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
KDM2A-202ENST00000398645 RUNDC1Q96C34 613 aa23.35■■□□□ 1.33
KDM2A-202ENST00000398645 TRERF1Q96PN7 1200 aa23.35■■□□□ 1.33
KDM2A-202ENST00000398645 KINO60870 393 aaKnown RBP23.35■■□□□ 1.33
KDM2A-202ENST00000398645 RBM25P49756 843 aaKnown RBP23.35■■□□□ 1.33
KDM2A-202ENST00000398645 PDZRN3Q9UPQ7 1066 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms