RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 C19orf44Q9H6X5 657 aa24.67■■□□□ 1.54
CSNK1D-204ENST00000398519 DCCP43146 1447 aa24.66■■□□□ 1.54
CSNK1D-204ENST00000398519 CDC42BPGQ6DT37 1551 aa24.63■■□□□ 1.53
CSNK1D-204ENST00000398519 EIF3AQ14152 1382 aaKnown RBP24.63■■□□□ 1.53
CSNK1D-204ENST00000398519 ADGRB2O60241 1585 aa24.62■■□□□ 1.53
CSNK1D-204ENST00000398519 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
CSNK1D-204ENST00000398519 CENPJQ9HC77 1338 aaPredicted RBP24.62■■□□□ 1.53
CSNK1D-204ENST00000398519 UBAP1LF5GYI3 381 aa24.61■■□□□ 1.53
CSNK1D-204ENST00000398519 ATF3P18847 181 aa24.6■■□□□ 1.53
CSNK1D-204ENST00000398519 MINK1Q8N4C8 1332 aaPredicted RBP24.6■■□□□ 1.53
CSNK1D-204ENST00000398519 TOM1O60784 492 aa24.59■■□□□ 1.53
CSNK1D-204ENST00000398519 CADPS2Q86UW7 1296 aa24.59■■□□□ 1.53
CSNK1D-204ENST00000398519 HIRIP3Q9BW71 556 aaPredicted RBP24.58■■□□□ 1.52
CSNK1D-204ENST00000398519 USP47Q96K76 1375 aa24.57■■□□□ 1.52
CSNK1D-204ENST00000398519 MST1RQ04912 1400 aa24.56■■□□□ 1.52
CSNK1D-204ENST00000398519 FMN2Q9NZ56 1722 aa24.56■■□□□ 1.52
CSNK1D-204ENST00000398519 SLAIN2Q9P270 581 aa24.54■■□□□ 1.52
CSNK1D-204ENST00000398519 ST20-MTHFSA0A0A6YYL1 179 aa24.51■■□□□ 1.51
CSNK1D-204ENST00000398519 PIP4K2BP78356 416 aa24.51■■□□□ 1.51
CSNK1D-204ENST00000398519 FBXO41Q8TF61 875 aa24.51■■□□□ 1.51
CSNK1D-204ENST00000398519 SBNO2Q9Y2G9 1366 aa24.51■■□□□ 1.51
CSNK1D-204ENST00000398519 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
CSNK1D-204ENST00000398519 WASLO00401 505 aaPredicted RBP24.5■■□□□ 1.51
CSNK1D-204ENST00000398519 TULP4Q9NRJ4 1543 aa24.5■■□□□ 1.51
CSNK1D-204ENST00000398519 ROBO1Q9Y6N7 1651 aa24.49■■□□□ 1.51
CSNK1D-204ENST00000398519 USP32Q8NFA0 1604 aa24.49■■□□□ 1.51
CSNK1D-204ENST00000398519 NUTM2FA1L443 756 aa24.48■■□□□ 1.51
CSNK1D-204ENST00000398519 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
CSNK1D-204ENST00000398519 TESK2Q96S53 571 aa24.46■■□□□ 1.51
CSNK1D-204ENST00000398519 CDK19Q9BWU1 502 aa24.46■■□□□ 1.51
CSNK1D-204ENST00000398519 ANKARQ7Z5J8 1434 aa24.45■■□□□ 1.51
CSNK1D-204ENST00000398519 RGPD8O14715 1765 aaPredicted RBP24.45■■□□□ 1.5
CSNK1D-204ENST00000398519 PRR36Q9H6K5 1346 aa24.44■■□□□ 1.5
CSNK1D-204ENST00000398519 ATP7BP35670 1465 aa24.44■■□□□ 1.5
CSNK1D-204ENST00000398519 EIF4G2P78344 907 aaKnown RBP eCLIP24.43■■□□□ 1.5
CSNK1D-204ENST00000398519 BRINP3Q76B58 766 aa24.43■■□□□ 1.5
CSNK1D-204ENST00000398519 EVC2Q86UK5 1308 aa24.43■■□□□ 1.5
CSNK1D-204ENST00000398519 ZEB1P37275 1124 aaPredicted RBP24.42■■□□□ 1.5
CSNK1D-204ENST00000398519 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
CSNK1D-204ENST00000398519 HSPA5P11021 654 aaKnown RBP24.42■■□□□ 1.5
CSNK1D-204ENST00000398519 SRPK2P78362 688 aaKnown RBP24.4■■□□□ 1.5
CSNK1D-204ENST00000398519 ESCO1Q5FWF5 840 aa24.4■■□□□ 1.5
CSNK1D-204ENST00000398519 CABP2Q9NPB3 220 aa24.4■■□□□ 1.5
CSNK1D-204ENST00000398519 TOPAZ1Q8N9V7 1692 aa24.4■■□□□ 1.5
CSNK1D-204ENST00000398519 NUDT16Q96DE0 195 aaKnown RBP24.38■■□□□ 1.49
CSNK1D-204ENST00000398519 ITSN1Q15811 1721 aa24.38■■□□□ 1.49
CSNK1D-204ENST00000398519 KIF1AQ12756 1690 aa24.36■■□□□ 1.49
CSNK1D-204ENST00000398519 NHSL1Q5SYE7 1610 aa24.36■■□□□ 1.49
CSNK1D-204ENST00000398519 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
CSNK1D-204ENST00000398519 AHDC1Q5TGY3 1603 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-204ENST00000398519 SLC24A1O60721 1099 aa24.35■■□□□ 1.49
CSNK1D-204ENST00000398519 PHF8Q9UPP1 1060 aa24.33■■□□□ 1.49
CSNK1D-204ENST00000398519 TMF1P82094 1093 aa24.33■■□□□ 1.48
CSNK1D-204ENST00000398519 CCDC61Q9Y6R9 512 aa24.33■■□□□ 1.48
CSNK1D-204ENST00000398519 ILDR1Q86SU0 546 aaPredicted RBP24.32■■□□□ 1.48
CSNK1D-204ENST00000398519 DDX17Q92841 729 aaKnown RBP24.32■■□□□ 1.48
CSNK1D-204ENST00000398519 PHLPP1O60346 1717 aa24.32■■□□□ 1.48
CSNK1D-204ENST00000398519 PPIP5K1Q6PFW1 1433 aa24.32■■□□□ 1.48
CSNK1D-204ENST00000398519 PMFBP1Q8TBY8 1022 aa24.31■■□□□ 1.48
CSNK1D-204ENST00000398519 ATAD2Q6PL18 1390 aa24.31■■□□□ 1.48
CSNK1D-204ENST00000398519 HSPA1LP34931 641 aa24.3■■□□□ 1.48
CSNK1D-204ENST00000398519 FOXO3O43524 673 aa24.29■■□□□ 1.48
CSNK1D-204ENST00000398519 COL16A1Q07092 1604 aaPredicted RBP24.29■■□□□ 1.48
CSNK1D-204ENST00000398519 PUS7Q96PZ0 661 aaKnown RBP24.29■■□□□ 1.48
CSNK1D-204ENST00000398519 NPHP3Q7Z494 1330 aa24.27■■□□□ 1.48
CSNK1D-204ENST00000398519 PLEKHG3A1L390 1219 aa24.27■■□□□ 1.48
CSNK1D-204ENST00000398519 PXDNQ92626 1479 aa24.27■■□□□ 1.48
CSNK1D-204ENST00000398519 CABP1Q9NZU7 370 aa24.26■■□□□ 1.47
CSNK1D-204ENST00000398519 POLR3AO14802 1390 aaPredicted RBP24.25■■□□□ 1.47
CSNK1D-204ENST00000398519 SOS2Q07890 1332 aaPredicted RBP24.24■■□□□ 1.47
CSNK1D-204ENST00000398519 XPCQ01831 940 aaPredicted RBP24.24■■□□□ 1.47
CSNK1D-204ENST00000398519 CDCA8Q53HL2 280 aa24.24■■□□□ 1.47
CSNK1D-204ENST00000398519 ACEP12821 1306 aa24.23■■□□□ 1.47
CSNK1D-204ENST00000398519 NGDNQ8NEJ9 315 aaKnown RBP24.23■■□□□ 1.47
CSNK1D-204ENST00000398519 C11orf95C9JLR9 678 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-204ENST00000398519 MYOM1P52179 1685 aa24.2■■□□□ 1.46
CSNK1D-204ENST00000398519 PSME1Q06323 249 aa24.2■■□□□ 1.46
CSNK1D-204ENST00000398519 KRT28Q7Z3Y7 464 aa24.2■■□□□ 1.46
CSNK1D-204ENST00000398519 TMC1Q8TDI8 760 aa24.2■■□□□ 1.46
CSNK1D-204ENST00000398519 SLC12A5Q9H2X9 1139 aa24.2■■□□□ 1.46
CSNK1D-204ENST00000398519 TRPM3Q9HCF6 1732 aaPredicted RBP24.19■■□□□ 1.46
CSNK1D-204ENST00000398519 CD163L1Q9NR16 1453 aa24.19■■□□□ 1.46
CSNK1D-204ENST00000398519 NINLQ9Y2I6 1382 aa24.19■■□□□ 1.46
CSNK1D-204ENST00000398519 AKAP12Q02952 1782 aa24.18■■□□□ 1.46
CSNK1D-204ENST00000398519 CPSF1Q10570 1443 aaKnown RBP24.17■■□□□ 1.46
CSNK1D-204ENST00000398519 LRRC59Q96AG4 307 aaKnown RBP24.16■■□□□ 1.46
CSNK1D-204ENST00000398519 USP6P35125 1406 aa24.15■■□□□ 1.46
CSNK1D-204ENST00000398519 SBNO1A3KN83 1393 aa24.15■■□□□ 1.46
CSNK1D-204ENST00000398519 KIF7Q2M1P5 1343 aa24.15■■□□□ 1.46
CSNK1D-204ENST00000398519 POLR3GLQ9BT43 218 aa24.15■■□□□ 1.46
CSNK1D-204ENST00000398519 MON2Q7Z3U7 1717 aa24.14■■□□□ 1.45
CSNK1D-204ENST00000398519 TNS3Q68CZ2 1445 aa24.13■■□□□ 1.45
CSNK1D-204ENST00000398519 A0A1W2PP64 1363 aa24.13■■□□□ 1.45
CSNK1D-204ENST00000398519 SHPRHQ149N8 1683 aa24.13■■□□□ 1.45
CSNK1D-204ENST00000398519 JCADQ9P266 1359 aa24.13■■□□□ 1.45
CSNK1D-204ENST00000398519 SPATA31A3Q5VYP0 1347 aa24.12■■□□□ 1.45
CSNK1D-204ENST00000398519 NRKQ7Z2Y5 1582 aa24.12■■□□□ 1.45
CSNK1D-204ENST00000398519 ALS2Q96Q42 1657 aa24.12■■□□□ 1.45
CSNK1D-204ENST00000398519 ZNF692Q9BU19 519 aaPredicted RBP24.12■■□□□ 1.45
CSNK1D-204ENST00000398519 SSH2Q76I76 1423 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms