RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PRAM1Q96QH2 718 aa30.39■■■□□ 2.45
TSPAN4-206ENST00000397408 SLAIN2Q9P270 581 aa30.39■■■□□ 2.45
TSPAN4-206ENST00000397408 NBPF8Q3BBV2 869 aa30.36■■■□□ 2.45
TSPAN4-206ENST00000397408 CDC42BPGQ6DT37 1551 aa30.36■■■□□ 2.45
TSPAN4-206ENST00000397408 ARHGEF28Q8N1W1 1705 aaKnown RBP30.35■■■□□ 2.45
TSPAN4-206ENST00000397408 POGKQ9P215 609 aa30.35■■■□□ 2.45
TSPAN4-206ENST00000397408 ROBO1Q9Y6N7 1651 aa30.35■■■□□ 2.45
TSPAN4-206ENST00000397408 MST1RQ04912 1400 aa30.34■■■□□ 2.45
TSPAN4-206ENST00000397408 SAFB2Q14151 953 aaKnown RBP eCLIP30.34■■■□□ 2.45
TSPAN4-206ENST00000397408 ROCK2O75116 1388 aaKnown RBP30.32■■■□□ 2.44
TSPAN4-206ENST00000397408 HSPA1LP34931 641 aa30.28■■■□□ 2.44
TSPAN4-206ENST00000397408 RALGAPBQ86X10 1494 aa30.27■■■□□ 2.44
TSPAN4-206ENST00000397408 C1orf167Q5SNV9 1468 aa30.26■■■□□ 2.43
TSPAN4-206ENST00000397408 TIMELESSQ9UNS1 1208 aa30.25■■■□□ 2.43
TSPAN4-206ENST00000397408 ADGRB2O60241 1585 aa30.24■■■□□ 2.43
TSPAN4-206ENST00000397408 GPRASP1Q5JY77 1395 aa30.23■■■□□ 2.43
TSPAN4-206ENST00000397408 FMN2Q9NZ56 1722 aa30.23■■■□□ 2.43
TSPAN4-206ENST00000397408 MINK1Q8N4C8 1332 aaPredicted RBP30.23■■■□□ 2.43
TSPAN4-206ENST00000397408 BRINP3Q76B58 766 aa30.22■■■□□ 2.43
TSPAN4-206ENST00000397408 HIRIP3Q9BW71 556 aaPredicted RBP30.21■■■□□ 2.43
TSPAN4-206ENST00000397408 NUTM2FA1L443 756 aa30.19■■■□□ 2.42
TSPAN4-206ENST00000397408 CARD11Q9BXL7 1154 aa30.17■■■□□ 2.42
TSPAN4-206ENST00000397408 CENPJQ9HC77 1338 aaPredicted RBP30.17■■■□□ 2.42
TSPAN4-206ENST00000397408 PHLPP1O60346 1717 aa30.16■■■□□ 2.42
TSPAN4-206ENST00000397408 AHDC1Q5TGY3 1603 aaPredicted RBP30.15■■■□□ 2.42
TSPAN4-206ENST00000397408 QRICH2Q9H0J4 1663 aa30.14■■■□□ 2.42
TSPAN4-206ENST00000397408 ORAI2Q96SN7 254 aa30.14■■■□□ 2.42
TSPAN4-206ENST00000397408 EIF3AQ14152 1382 aaKnown RBP30.14■■■□□ 2.42
TSPAN4-206ENST00000397408 NHSL1Q5SYE7 1610 aa30.11■■■□□ 2.41
TSPAN4-206ENST00000397408 WASLO00401 505 aaPredicted RBP30.11■■■□□ 2.41
TSPAN4-206ENST00000397408 ESCO1Q5FWF5 840 aa30.11■■■□□ 2.41
TSPAN4-206ENST00000397408 COL16A1Q07092 1604 aaPredicted RBP30.1■■■□□ 2.41
TSPAN4-206ENST00000397408 ANKARQ7Z5J8 1434 aa30.09■■■□□ 2.41
TSPAN4-206ENST00000397408 TULP4Q9NRJ4 1543 aa30.09■■■□□ 2.41
TSPAN4-206ENST00000397408 USP32Q8NFA0 1604 aa30.08■■■□□ 2.41
TSPAN4-206ENST00000397408 RGPD8O14715 1765 aaPredicted RBP30.08■■■□□ 2.41
TSPAN4-206ENST00000397408 DDX17Q92841 729 aaKnown RBP30.07■■■□□ 2.4
TSPAN4-206ENST00000397408 KIF1AQ12756 1690 aa30.04■■■□□ 2.4
TSPAN4-206ENST00000397408 PRR36Q9H6K5 1346 aa30.03■■■□□ 2.4
TSPAN4-206ENST00000397408 CDK19Q9BWU1 502 aa30.03■■■□□ 2.4
TSPAN4-206ENST00000397408 ATP7BP35670 1465 aa30.02■■■□□ 2.4
TSPAN4-206ENST00000397408 PHF8Q9UPP1 1060 aa29.99■■■□□ 2.39
TSPAN4-206ENST00000397408 NPHP3Q7Z494 1330 aa29.99■■■□□ 2.39
TSPAN4-206ENST00000397408 FOXO3O43524 673 aa29.98■■■□□ 2.39
TSPAN4-206ENST00000397408 JCADQ9P266 1359 aa29.97■■■□□ 2.39
TSPAN4-206ENST00000397408 SBNO2Q9Y2G9 1366 aa29.97■■■□□ 2.39
TSPAN4-206ENST00000397408 ITSN1Q15811 1721 aa29.96■■■□□ 2.39
TSPAN4-206ENST00000397408 NUDT16Q96DE0 195 aaKnown RBP29.96■■■□□ 2.39
TSPAN4-206ENST00000397408 SRPK2P78362 688 aaKnown RBP29.96■■■□□ 2.39
TSPAN4-206ENST00000397408 SOS2Q07890 1332 aaPredicted RBP29.95■■■□□ 2.39
TSPAN4-206ENST00000397408 USP47Q96K76 1375 aa29.95■■■□□ 2.39
TSPAN4-206ENST00000397408 PXDNQ92626 1479 aa29.95■■■□□ 2.38
TSPAN4-206ENST00000397408 EVC2Q86UK5 1308 aa29.94■■■□□ 2.38
TSPAN4-206ENST00000397408 XPCQ01831 940 aaPredicted RBP29.94■■■□□ 2.38
TSPAN4-206ENST00000397408 PMFBP1Q8TBY8 1022 aa29.94■■■□□ 2.38
TSPAN4-206ENST00000397408 TOPAZ1Q8N9V7 1692 aa29.93■■■□□ 2.38
TSPAN4-206ENST00000397408 CABP2Q9NPB3 220 aa29.93■■■□□ 2.38
TSPAN4-206ENST00000397408 SHPRHQ149N8 1683 aa29.91■■■□□ 2.38
TSPAN4-206ENST00000397408 LRRC59Q96AG4 307 aaKnown RBP29.91■■■□□ 2.38
TSPAN4-206ENST00000397408 ST20-MTHFSA0A0A6YYL1 179 aa29.9■■■□□ 2.38
TSPAN4-206ENST00000397408 CCDC61Q9Y6R9 512 aa29.88■■■□□ 2.37
TSPAN4-206ENST00000397408 MED1Q15648 1581 aaPredicted RBP29.88■■■□□ 2.37
TSPAN4-206ENST00000397408 PNPLA6Q8IY17 1366 aa29.86■■■□□ 2.37
TSPAN4-206ENST00000397408 KRT28Q7Z3Y7 464 aa29.86■■■□□ 2.37
TSPAN4-206ENST00000397408 NGDNQ8NEJ9 315 aaKnown RBP29.85■■■□□ 2.37
TSPAN4-206ENST00000397408 TESK2Q96S53 571 aa29.85■■■□□ 2.37
TSPAN4-206ENST00000397408 PPIP5K1Q6PFW1 1433 aa29.84■■■□□ 2.37
TSPAN4-206ENST00000397408 PSME1Q06323 249 aa29.84■■■□□ 2.37
TSPAN4-206ENST00000397408 SPATA31A6Q5VVP1 1343 aa29.82■■■□□ 2.36
TSPAN4-206ENST00000397408 PLEKHG3A1L390 1219 aa29.8■■■□□ 2.36
TSPAN4-206ENST00000397408 ATAD2Q6PL18 1390 aa29.8■■■□□ 2.36
TSPAN4-206ENST00000397408 POLR3AO14802 1390 aaPredicted RBP29.79■■■□□ 2.36
TSPAN4-206ENST00000397408 TNS3Q68CZ2 1445 aa29.79■■■□□ 2.36
TSPAN4-206ENST00000397408 SBNO1A3KN83 1393 aa29.79■■■□□ 2.36
TSPAN4-206ENST00000397408 ACEP12821 1306 aa29.78■■■□□ 2.36
TSPAN4-206ENST00000397408 SPATA31A3Q5VYP0 1347 aa29.78■■■□□ 2.36
TSPAN4-206ENST00000397408 TRPM3Q9HCF6 1732 aaPredicted RBP29.78■■■□□ 2.36
TSPAN4-206ENST00000397408 LRP6O75581 1613 aa29.77■■■□□ 2.36
TSPAN4-206ENST00000397408 CABP1Q9NZU7 370 aa29.77■■■□□ 2.36
TSPAN4-206ENST00000397408 COL22A1Q8NFW1 1626 aaPredicted RBP29.77■■■□□ 2.36
TSPAN4-206ENST00000397408 SLC24A1O60721 1099 aa29.75■■■□□ 2.35
TSPAN4-206ENST00000397408 NUTM2BA6NNL0 878 aaPredicted RBP29.74■■■□□ 2.35
TSPAN4-206ENST00000397408 NUTM2EB1AL46 878 aaPredicted RBP29.74■■■□□ 2.35
TSPAN4-206ENST00000397408 NUTM2AQ8IVF1 878 aaPredicted RBP29.74■■■□□ 2.35
TSPAN4-206ENST00000397408 DISP3Q9P2K9 1392 aa29.74■■■□□ 2.35
TSPAN4-206ENST00000397408 EIF4G2P78344 907 aaKnown RBP eCLIP29.72■■■□□ 2.35
TSPAN4-206ENST00000397408 TMF1P82094 1093 aa29.72■■■□□ 2.35
TSPAN4-206ENST00000397408 LMOD2Q6P5Q4 547 aa29.71■■■□□ 2.35
TSPAN4-206ENST00000397408 ARHGEF10O15013 1369 aa29.7■■■□□ 2.35
TSPAN4-206ENST00000397408 PAK3O75914 559 aaPredicted RBP29.7■■■□□ 2.34
TSPAN4-206ENST00000397408 PUS7Q96PZ0 661 aaKnown RBP29.7■■■□□ 2.34
TSPAN4-206ENST00000397408 ALS2Q96Q42 1657 aa29.69■■■□□ 2.34
TSPAN4-206ENST00000397408 HSPA5P11021 654 aaKnown RBP29.69■■■□□ 2.34
TSPAN4-206ENST00000397408 MEX3CQ5U5Q3 659 aaKnown RBP29.67■■■□□ 2.34
TSPAN4-206ENST00000397408 PHF23Q9BUL5 403 aaPredicted RBP29.67■■■□□ 2.34
TSPAN4-206ENST00000397408 USP6P35125 1406 aa29.66■■■□□ 2.34
TSPAN4-206ENST00000397408 TMC1Q8TDI8 760 aa29.66■■■□□ 2.34
TSPAN4-206ENST00000397408 AKAP12Q02952 1782 aa29.65■■■□□ 2.34
TSPAN4-206ENST00000397408 PLEKHG5O94827 1062 aa29.62■■■□□ 2.33
TSPAN4-206ENST00000397408 CPSF1Q10570 1443 aaKnown RBP29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms