RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 CARD11Q9BXL7 1154 aa19.41■□□□□ 0.7
GAPDH-204ENST00000396859 DCCP43146 1447 aa19.41■□□□□ 0.7
GAPDH-204ENST00000396859 NALCNQ8IZF0 1738 aa19.4■□□□□ 0.7
GAPDH-204ENST00000396859 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.4■□□□□ 0.7
GAPDH-204ENST00000396859 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.7
GAPDH-204ENST00000396859 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
GAPDH-204ENST00000396859 ARHGEF28Q8N1W1 1705 aaKnown RBP19.39■□□□□ 0.7
GAPDH-204ENST00000396859 EIF3AQ14152 1382 aaKnown RBP19.39■□□□□ 0.69
GAPDH-204ENST00000396859 GPRASP1Q5JY77 1395 aa19.39■□□□□ 0.69
GAPDH-204ENST00000396859 PLEKHH1Q9ULM0 1364 aa19.39■□□□□ 0.69
GAPDH-204ENST00000396859 PIP4K2BP78356 416 aa19.37■□□□□ 0.69
GAPDH-204ENST00000396859 CENPJQ9HC77 1338 aaPredicted RBP19.35■□□□□ 0.69
GAPDH-204ENST00000396859 SLAIN2Q9P270 581 aa19.34■□□□□ 0.69
GAPDH-204ENST00000396859 CDC42BPGQ6DT37 1551 aa19.34■□□□□ 0.69
GAPDH-204ENST00000396859 MINK1Q8N4C8 1332 aaPredicted RBP19.33■□□□□ 0.69
GAPDH-204ENST00000396859 QRICH2Q9H0J4 1663 aa19.3■□□□□ 0.68
GAPDH-204ENST00000396859 HIRIP3Q9BW71 556 aaPredicted RBP19.3■□□□□ 0.68
GAPDH-204ENST00000396859 ADGRB2O60241 1585 aa19.3■□□□□ 0.68
GAPDH-204ENST00000396859 MST1RQ04912 1400 aa19.29■□□□□ 0.68
GAPDH-204ENST00000396859 FMN2Q9NZ56 1722 aa19.28■□□□□ 0.68
GAPDH-204ENST00000396859 NUTM2FA1L443 756 aa19.26■□□□□ 0.67
GAPDH-204ENST00000396859 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
GAPDH-204ENST00000396859 ROBO1Q9Y6N7 1651 aa19.26■□□□□ 0.67
GAPDH-204ENST00000396859 C1orf167Q5SNV9 1468 aa19.25■□□□□ 0.67
GAPDH-204ENST00000396859 USP47Q96K76 1375 aa19.25■□□□□ 0.67
GAPDH-204ENST00000396859 SLC24A1O60721 1099 aa19.24■□□□□ 0.67
GAPDH-204ENST00000396859 EVC2Q86UK5 1308 aa19.24■□□□□ 0.67
GAPDH-204ENST00000396859 ESCO1Q5FWF5 840 aa19.23■□□□□ 0.67
GAPDH-204ENST00000396859 CDK19Q9BWU1 502 aa19.23■□□□□ 0.67
GAPDH-204ENST00000396859 ANKARQ7Z5J8 1434 aa19.23■□□□□ 0.67
GAPDH-204ENST00000396859 SRPK2P78362 688 aaKnown RBP19.22■□□□□ 0.67
GAPDH-204ENST00000396859 BRINP3Q76B58 766 aa19.22■□□□□ 0.67
GAPDH-204ENST00000396859 SBNO2Q9Y2G9 1366 aa19.21■□□□□ 0.67
GAPDH-204ENST00000396859 TULP4Q9NRJ4 1543 aa19.21■□□□□ 0.67
GAPDH-204ENST00000396859 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
GAPDH-204ENST00000396859 EIF4G2P78344 907 aaKnown RBP eCLIP19.2■□□□□ 0.66
GAPDH-204ENST00000396859 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
GAPDH-204ENST00000396859 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
GAPDH-204ENST00000396859 KIF1AQ12756 1690 aa19.17■□□□□ 0.66
GAPDH-204ENST00000396859 ITSN1Q15811 1721 aa19.17■□□□□ 0.66
GAPDH-204ENST00000396859 NUDT16Q96DE0 195 aaKnown RBP19.17■□□□□ 0.66
GAPDH-204ENST00000396859 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
GAPDH-204ENST00000396859 HSPA1LP34931 641 aa19.16■□□□□ 0.66
GAPDH-204ENST00000396859 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
GAPDH-204ENST00000396859 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
GAPDH-204ENST00000396859 PHLPP1O60346 1717 aa19.16■□□□□ 0.66
GAPDH-204ENST00000396859 USP32Q8NFA0 1604 aa19.15■□□□□ 0.66
GAPDH-204ENST00000396859 NPHP3Q7Z494 1330 aa19.15■□□□□ 0.66
GAPDH-204ENST00000396859 ATP7BP35670 1465 aa19.15■□□□□ 0.66
GAPDH-204ENST00000396859 AHDC1Q5TGY3 1603 aaPredicted RBP19.14■□□□□ 0.66
GAPDH-204ENST00000396859 TMF1P82094 1093 aa19.14■□□□□ 0.65
GAPDH-204ENST00000396859 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
GAPDH-204ENST00000396859 PRR36Q9H6K5 1346 aa19.14■□□□□ 0.65
GAPDH-204ENST00000396859 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.65
GAPDH-204ENST00000396859 ATAD2Q6PL18 1390 aa19.12■□□□□ 0.65
GAPDH-204ENST00000396859 FOXO3O43524 673 aa19.12■□□□□ 0.65
GAPDH-204ENST00000396859 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
GAPDH-204ENST00000396859 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
GAPDH-204ENST00000396859 NGDNQ8NEJ9 315 aaKnown RBP19.12■□□□□ 0.65
GAPDH-204ENST00000396859 PMFBP1Q8TBY8 1022 aa19.12■□□□□ 0.65
GAPDH-204ENST00000396859 TESK2Q96S53 571 aa19.12■□□□□ 0.65
GAPDH-204ENST00000396859 ILDR2Q71H61 639 aa19.11■□□□□ 0.65
GAPDH-204ENST00000396859 PPIP5K1Q6PFW1 1433 aa19.09■□□□□ 0.65
GAPDH-204ENST00000396859 TOPAZ1Q8N9V7 1692 aa19.09■□□□□ 0.65
GAPDH-204ENST00000396859 PSME1Q06323 249 aa19.09■□□□□ 0.65
GAPDH-204ENST00000396859 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
GAPDH-204ENST00000396859 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
GAPDH-204ENST00000396859 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
GAPDH-204ENST00000396859 COL16A1Q07092 1604 aaPredicted RBP19.07■□□□□ 0.64
GAPDH-204ENST00000396859 PLEKHG3A1L390 1219 aa19.07■□□□□ 0.64
GAPDH-204ENST00000396859 KRT28Q7Z3Y7 464 aa19.07■□□□□ 0.64
GAPDH-204ENST00000396859 SOS2Q07890 1332 aaPredicted RBP19.06■□□□□ 0.64
GAPDH-204ENST00000396859 CABP1Q9NZU7 370 aa19.06■□□□□ 0.64
GAPDH-204ENST00000396859 XPCQ01831 940 aaPredicted RBP19.05■□□□□ 0.64
GAPDH-204ENST00000396859 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
GAPDH-204ENST00000396859 JCADQ9P266 1359 aa19.05■□□□□ 0.64
GAPDH-204ENST00000396859 DISP3Q9P2K9 1392 aa19.05■□□□□ 0.64
GAPDH-204ENST00000396859 ACEP12821 1306 aa19.04■□□□□ 0.64
GAPDH-204ENST00000396859 PXDNQ92626 1479 aa19.03■□□□□ 0.64
GAPDH-204ENST00000396859 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
GAPDH-204ENST00000396859 NINLQ9Y2I6 1382 aa19.03■□□□□ 0.64
GAPDH-204ENST00000396859 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
GAPDH-204ENST00000396859 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
GAPDH-204ENST00000396859 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
GAPDH-204ENST00000396859 LMOD2Q6P5Q4 547 aa19■□□□□ 0.63
GAPDH-204ENST00000396859 HDGFL2Q7Z4V5 671 aaPredicted RBP19■□□□□ 0.63
GAPDH-204ENST00000396859 TERF2IPQ9NYB0 399 aa19■□□□□ 0.63
GAPDH-204ENST00000396859 SBNO1A3KN83 1393 aa19■□□□□ 0.63
GAPDH-204ENST00000396859 SHPRHQ149N8 1683 aa18.99■□□□□ 0.63
GAPDH-204ENST00000396859 TNS3Q68CZ2 1445 aa18.99■□□□□ 0.63
GAPDH-204ENST00000396859 SPATA31A3Q5VYP0 1347 aa18.99■□□□□ 0.63
GAPDH-204ENST00000396859 BRD4O60885 1362 aaPredicted RBP18.98■□□□□ 0.63
GAPDH-204ENST00000396859 ARHGEF10O15013 1369 aa18.97■□□□□ 0.63
GAPDH-204ENST00000396859 SLC12A5Q9H2X9 1139 aa18.97■□□□□ 0.63
GAPDH-204ENST00000396859 SPATA31A6Q5VVP1 1343 aa18.97■□□□□ 0.63
GAPDH-204ENST00000396859 KTN1Q86UP2 1357 aaKnown RBP18.96■□□□□ 0.63
GAPDH-204ENST00000396859 PNPLA6Q8IY17 1366 aa18.96■□□□□ 0.63
GAPDH-204ENST00000396859 USP6P35125 1406 aa18.96■□□□□ 0.63
GAPDH-204ENST00000396859 AKAP12Q02952 1782 aa18.96■□□□□ 0.63
GAPDH-204ENST00000396859 TRPM3Q9HCF6 1732 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms