RNA–Protein interactions for RNA: ENST00000396680.2

ATF4-202, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-202ENST00000396680 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
ATF4-202ENST00000396680 DLC1Q96QB1 1528 aa20.11■□□□□ 0.81
ATF4-202ENST00000396680 SIRT1Q96EB6 747 aa20.1■□□□□ 0.81
ATF4-202ENST00000396680 NBPF8Q3BBV2 869 aa20.09■□□□□ 0.81
ATF4-202ENST00000396680 TRPM1Q7Z4N2 1603 aa20.08■□□□□ 0.81
ATF4-202ENST00000396680 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.8
ATF4-202ENST00000396680 ROBO1Q9Y6N7 1651 aa20.08■□□□□ 0.8
ATF4-202ENST00000396680 MST1RQ04912 1400 aa20.07■□□□□ 0.8
ATF4-202ENST00000396680 HSPA1LP34931 641 aa20.06■□□□□ 0.8
ATF4-202ENST00000396680 CDC42BPGQ6DT37 1551 aa20.06■□□□□ 0.8
ATF4-202ENST00000396680 ARHGEF28Q8N1W1 1705 aaKnown RBP20.04■□□□□ 0.8
ATF4-202ENST00000396680 MINK1Q8N4C8 1332 aaPredicted RBP20.03■□□□□ 0.8
ATF4-202ENST00000396680 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
ATF4-202ENST00000396680 HIRIP3Q9BW71 556 aaPredicted RBP20.03■□□□□ 0.8
ATF4-202ENST00000396680 C1orf167Q5SNV9 1468 aa20.02■□□□□ 0.79
ATF4-202ENST00000396680 BRINP3Q76B58 766 aa20.02■□□□□ 0.79
ATF4-202ENST00000396680 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
ATF4-202ENST00000396680 RALGAPBQ86X10 1494 aa20■□□□□ 0.79
ATF4-202ENST00000396680 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
ATF4-202ENST00000396680 CENPJQ9HC77 1338 aaPredicted RBP19.97■□□□□ 0.79
ATF4-202ENST00000396680 FMN2Q9NZ56 1722 aa19.97■□□□□ 0.79
ATF4-202ENST00000396680 ESCO1Q5FWF5 840 aa19.97■□□□□ 0.79
ATF4-202ENST00000396680 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
ATF4-202ENST00000396680 ADGRB2O60241 1585 aa19.97■□□□□ 0.79
ATF4-202ENST00000396680 EIF3AQ14152 1382 aaKnown RBP19.96■□□□□ 0.79
ATF4-202ENST00000396680 GPRASP1Q5JY77 1395 aa19.96■□□□□ 0.79
ATF4-202ENST00000396680 PHLPP1O60346 1717 aa19.95■□□□□ 0.78
ATF4-202ENST00000396680 WASLO00401 505 aaPredicted RBP19.93■□□□□ 0.78
ATF4-202ENST00000396680 DDX17Q92841 729 aaKnown RBP19.93■□□□□ 0.78
ATF4-202ENST00000396680 AHDC1Q5TGY3 1603 aaPredicted RBP19.92■□□□□ 0.78
ATF4-202ENST00000396680 QRICH2Q9H0J4 1663 aa19.92■□□□□ 0.78
ATF4-202ENST00000396680 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
ATF4-202ENST00000396680 NHSL1Q5SYE7 1610 aa19.9■□□□□ 0.78
ATF4-202ENST00000396680 ANKARQ7Z5J8 1434 aa19.89■□□□□ 0.78
ATF4-202ENST00000396680 CDK19Q9BWU1 502 aa19.89■□□□□ 0.77
ATF4-202ENST00000396680 COL16A1Q07092 1604 aaPredicted RBP19.89■□□□□ 0.77
ATF4-202ENST00000396680 USP32Q8NFA0 1604 aa19.87■□□□□ 0.77
ATF4-202ENST00000396680 FOXO3O43524 673 aa19.87■□□□□ 0.77
ATF4-202ENST00000396680 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
ATF4-202ENST00000396680 PHF8Q9UPP1 1060 aa19.87■□□□□ 0.77
ATF4-202ENST00000396680 NPHP3Q7Z494 1330 aa19.86■□□□□ 0.77
ATF4-202ENST00000396680 PRR36Q9H6K5 1346 aa19.86■□□□□ 0.77
ATF4-202ENST00000396680 KIF1AQ12756 1690 aa19.86■□□□□ 0.77
ATF4-202ENST00000396680 RGPD8O14715 1765 aaPredicted RBP19.86■□□□□ 0.77
ATF4-202ENST00000396680 PMFBP1Q8TBY8 1022 aa19.85■□□□□ 0.77
ATF4-202ENST00000396680 XPCQ01831 940 aaPredicted RBP19.85■□□□□ 0.77
ATF4-202ENST00000396680 NUDT16Q96DE0 195 aaKnown RBP19.85■□□□□ 0.77
ATF4-202ENST00000396680 ATP7BP35670 1465 aa19.84■□□□□ 0.77
ATF4-202ENST00000396680 JCADQ9P266 1359 aa19.84■□□□□ 0.77
ATF4-202ENST00000396680 EVC2Q86UK5 1308 aa19.84■□□□□ 0.77
ATF4-202ENST00000396680 LRRC59Q96AG4 307 aaKnown RBP19.83■□□□□ 0.76
ATF4-202ENST00000396680 CABP2Q9NPB3 220 aa19.83■□□□□ 0.76
ATF4-202ENST00000396680 USP47Q96K76 1375 aa19.81■□□□□ 0.76
ATF4-202ENST00000396680 SOS2Q07890 1332 aaPredicted RBP19.81■□□□□ 0.76
ATF4-202ENST00000396680 ST20-MTHFSA0A0A6YYL1 179 aa19.8■□□□□ 0.76
ATF4-202ENST00000396680 ITSN1Q15811 1721 aa19.8■□□□□ 0.76
ATF4-202ENST00000396680 PXDNQ92626 1479 aa19.79■□□□□ 0.76
ATF4-202ENST00000396680 KRT28Q7Z3Y7 464 aa19.79■□□□□ 0.76
ATF4-202ENST00000396680 NGDNQ8NEJ9 315 aaKnown RBP19.79■□□□□ 0.76
ATF4-202ENST00000396680 SBNO2Q9Y2G9 1366 aa19.79■□□□□ 0.76
ATF4-202ENST00000396680 PSME1Q06323 249 aa19.78■□□□□ 0.76
ATF4-202ENST00000396680 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
ATF4-202ENST00000396680 MED1Q15648 1581 aaPredicted RBP19.77■□□□□ 0.75
ATF4-202ENST00000396680 PPIP5K1Q6PFW1 1433 aa19.77■□□□□ 0.75
ATF4-202ENST00000396680 SHPRHQ149N8 1683 aa19.76■□□□□ 0.75
ATF4-202ENST00000396680 TOPAZ1Q8N9V7 1692 aa19.76■□□□□ 0.75
ATF4-202ENST00000396680 PNPLA6Q8IY17 1366 aa19.75■□□□□ 0.75
ATF4-202ENST00000396680 NUTM2BA6NNL0 878 aaPredicted RBP19.75■□□□□ 0.75
ATF4-202ENST00000396680 NUTM2EB1AL46 878 aaPredicted RBP19.75■□□□□ 0.75
ATF4-202ENST00000396680 NUTM2AQ8IVF1 878 aaPredicted RBP19.75■□□□□ 0.75
ATF4-202ENST00000396680 SPATA31A6Q5VVP1 1343 aa19.74■□□□□ 0.75
ATF4-202ENST00000396680 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
ATF4-202ENST00000396680 TESK2Q96S53 571 aa19.73■□□□□ 0.75
ATF4-202ENST00000396680 ACEP12821 1306 aa19.72■□□□□ 0.75
ATF4-202ENST00000396680 ATAD2Q6PL18 1390 aa19.72■□□□□ 0.75
ATF4-202ENST00000396680 DISP3Q9P2K9 1392 aa19.72■□□□□ 0.75
ATF4-202ENST00000396680 CABP1Q9NZU7 370 aa19.72■□□□□ 0.75
ATF4-202ENST00000396680 SPATA31A3Q5VYP0 1347 aa19.72■□□□□ 0.75
ATF4-202ENST00000396680 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
ATF4-202ENST00000396680 PAK3O75914 559 aaPredicted RBP19.71■□□□□ 0.75
ATF4-202ENST00000396680 MEX3CQ5U5Q3 659 aaKnown RBP19.71■□□□□ 0.75
ATF4-202ENST00000396680 PHF23Q9BUL5 403 aaPredicted RBP19.71■□□□□ 0.75
ATF4-202ENST00000396680 TNS3Q68CZ2 1445 aa19.71■□□□□ 0.75
ATF4-202ENST00000396680 SLC24A1O60721 1099 aa19.7■□□□□ 0.74
ATF4-202ENST00000396680 PLEKHG5O94827 1062 aa19.7■□□□□ 0.74
ATF4-202ENST00000396680 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
ATF4-202ENST00000396680 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
ATF4-202ENST00000396680 EIF4G2P78344 907 aaKnown RBP eCLIP19.69■□□□□ 0.74
ATF4-202ENST00000396680 TMF1P82094 1093 aa19.69■□□□□ 0.74
ATF4-202ENST00000396680 LRP6O75581 1613 aa19.69■□□□□ 0.74
ATF4-202ENST00000396680 TMC1Q8TDI8 760 aa19.68■□□□□ 0.74
ATF4-202ENST00000396680 ARHGEF10O15013 1369 aa19.66■□□□□ 0.74
ATF4-202ENST00000396680 TRPM3Q9HCF6 1732 aaPredicted RBP19.66■□□□□ 0.74
ATF4-202ENST00000396680 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
ATF4-202ENST00000396680 COL22A1Q8NFW1 1626 aaPredicted RBP19.66■□□□□ 0.74
ATF4-202ENST00000396680 HAP1P54257 671 aaPredicted RBP19.65■□□□□ 0.74
ATF4-202ENST00000396680 ADAMTS2O95450 1211 aa19.64■□□□□ 0.73
ATF4-202ENST00000396680 USP6P35125 1406 aa19.62■□□□□ 0.73
ATF4-202ENST00000396680 CDCA8Q53HL2 280 aa19.62■□□□□ 0.73
ATF4-202ENST00000396680 CABLES1Q8TDN4 633 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms