RNA–Protein interactions for RNA: ENST00000396075.5

LDHB-202, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-202ENST00000396075 NUTM2EB1AL46 878 aaPredicted RBP12.38□□□□□ -0.43
LDHB-202ENST00000396075 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
LDHB-202ENST00000396075 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
LDHB-202ENST00000396075 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
LDHB-202ENST00000396075 RAB3GAP2Q9H2M9 1393 aa12.36□□□□□ -0.43
LDHB-202ENST00000396075 ROBO2Q9HCK4 1378 aa12.36□□□□□ -0.43
LDHB-202ENST00000396075 SIRT1Q96EB6 747 aa12.36□□□□□ -0.43
LDHB-202ENST00000396075 STK26Q9P289 416 aa12.36□□□□□ -0.43
LDHB-202ENST00000396075 ASXL1Q8IXJ9 1541 aa12.36□□□□□ -0.43
LDHB-202ENST00000396075 PRAG1Q86YV5 1406 aa12.36□□□□□ -0.43
LDHB-202ENST00000396075 LRPPRCP42704 1394 aaKnown RBP12.35□□□□□ -0.43
LDHB-202ENST00000396075 DHX57Q6P158 1386 aaKnown RBP12.35□□□□□ -0.43
LDHB-202ENST00000396075 ABCC11Q96J66 1382 aa12.35□□□□□ -0.43
LDHB-202ENST00000396075 C1orf167Q5SNV9 1468 aa12.34□□□□□ -0.43
LDHB-202ENST00000396075 ESCO1Q5FWF5 840 aa12.34□□□□□ -0.43
LDHB-202ENST00000396075 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
LDHB-202ENST00000396075 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
LDHB-202ENST00000396075 NPHP3Q7Z494 1330 aa12.33□□□□□ -0.44
LDHB-202ENST00000396075 TMEM132EQ6IEE7 984 aa12.32□□□□□ -0.44
LDHB-202ENST00000396075 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
LDHB-202ENST00000396075 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
LDHB-202ENST00000396075 RXRBP28702 533 aa12.31□□□□□ -0.44
LDHB-202ENST00000396075 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
LDHB-202ENST00000396075 ORAI2Q96SN7 254 aa12.31□□□□□ -0.44
LDHB-202ENST00000396075 POGKQ9P215 609 aa12.31□□□□□ -0.44
LDHB-202ENST00000396075 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
LDHB-202ENST00000396075 TECPR2O15040 1411 aa12.3□□□□□ -0.44
LDHB-202ENST00000396075 AFF2P51816 1311 aa12.3□□□□□ -0.44
LDHB-202ENST00000396075 SOS2Q07890 1332 aaPredicted RBP12.3□□□□□ -0.44
LDHB-202ENST00000396075 YTHDC2Q9H6S0 1430 aaKnown RBP12.29□□□□□ -0.44
LDHB-202ENST00000396075 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
LDHB-202ENST00000396075 NGLY1Q96IV0 654 aa12.29□□□□□ -0.44
LDHB-202ENST00000396075 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
LDHB-202ENST00000396075 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
LDHB-202ENST00000396075 MYOM2P54296 1465 aa12.28□□□□□ -0.44
LDHB-202ENST00000396075 PSME1Q06323 249 aa12.28□□□□□ -0.44
LDHB-202ENST00000396075 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
LDHB-202ENST00000396075 CDC42BPGQ6DT37 1551 aa12.27□□□□□ -0.44
LDHB-202ENST00000396075 LAMC1P11047 1609 aa12.27□□□□□ -0.44
LDHB-202ENST00000396075 KDM2AQ9Y2K7 1162 aa12.27□□□□□ -0.45
LDHB-202ENST00000396075 PNPLA6Q8IY17 1366 aa12.27□□□□□ -0.45
LDHB-202ENST00000396075 FOXO3O43524 673 aa12.26□□□□□ -0.45
LDHB-202ENST00000396075 ADAMTS2O95450 1211 aa12.26□□□□□ -0.45
LDHB-202ENST00000396075 QTRT2Q9H974 415 aaKnown RBP12.26□□□□□ -0.45
LDHB-202ENST00000396075 RGS12O14924 1447 aa12.26□□□□□ -0.45
LDHB-202ENST00000396075 NUTM2FA1L443 756 aa12.25□□□□□ -0.45
LDHB-202ENST00000396075 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
LDHB-202ENST00000396075 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
LDHB-202ENST00000396075 NRXN1Q9ULB1 1477 aa12.25□□□□□ -0.45
LDHB-202ENST00000396075 KNDC1Q76NI1 1749 aa12.25□□□□□ -0.45
LDHB-202ENST00000396075 EIF3AQ14152 1382 aaKnown RBP12.24□□□□□ -0.45
LDHB-202ENST00000396075 HAP1P54257 671 aaPredicted RBP12.23□□□□□ -0.45
LDHB-202ENST00000396075 KRT28Q7Z3Y7 464 aa12.23□□□□□ -0.45
LDHB-202ENST00000396075 USP21Q9UK80 565 aa12.23□□□□□ -0.45
LDHB-202ENST00000396075 TRPC5Q9UL62 973 aaPredicted RBP12.23□□□□□ -0.45
LDHB-202ENST00000396075 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
LDHB-202ENST00000396075 TRAK1Q9UPV9 953 aa12.23□□□□□ -0.45
LDHB-202ENST00000396075 SAFB2Q14151 953 aaKnown RBP eCLIP12.22□□□□□ -0.45
LDHB-202ENST00000396075 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.45
LDHB-202ENST00000396075 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
LDHB-202ENST00000396075 DLC1Q96QB1 1528 aa12.21□□□□□ -0.46
LDHB-202ENST00000396075 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
LDHB-202ENST00000396075 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
LDHB-202ENST00000396075 XPCQ01831 940 aaPredicted RBP12.19□□□□□ -0.46
LDHB-202ENST00000396075 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
LDHB-202ENST00000396075 ANKARQ7Z5J8 1434 aa12.19□□□□□ -0.46
LDHB-202ENST00000396075 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
LDHB-202ENST00000396075 SPATA31A3Q5VYP0 1347 aa12.18□□□□□ -0.46
LDHB-202ENST00000396075 FMN2Q9NZ56 1722 aa12.18□□□□□ -0.46
LDHB-202ENST00000396075 PXDNQ92626 1479 aa12.17□□□□□ -0.46
LDHB-202ENST00000396075 WASLO00401 505 aaPredicted RBP12.17□□□□□ -0.46
LDHB-202ENST00000396075 MARF1Q9Y4F3 1742 aaKnown RBP12.17□□□□□ -0.46
LDHB-202ENST00000396075 SBNO1A3KN83 1393 aa12.17□□□□□ -0.46
LDHB-202ENST00000396075 ARHGEF10O15013 1369 aa12.17□□□□□ -0.46
LDHB-202ENST00000396075 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
LDHB-202ENST00000396075 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
LDHB-202ENST00000396075 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
LDHB-202ENST00000396075 PMFBP1Q8TBY8 1022 aa12.15□□□□□ -0.46
LDHB-202ENST00000396075 HIRIP3Q9BW71 556 aaPredicted RBP12.15□□□□□ -0.46
LDHB-202ENST00000396075 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
LDHB-202ENST00000396075 ADGRB1O14514 1584 aa12.13□□□□□ -0.47
LDHB-202ENST00000396075 TNS3Q68CZ2 1445 aa12.13□□□□□ -0.47
LDHB-202ENST00000396075 GJD4Q96KN9 370 aaPredicted RBP12.13□□□□□ -0.47
LDHB-202ENST00000396075 U3KPZ7 1027 aaPredicted RBP12.13□□□□□ -0.47
LDHB-202ENST00000396075 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
LDHB-202ENST00000396075 ATAD2Q6PL18 1390 aa12.12□□□□□ -0.47
LDHB-202ENST00000396075 ADGRB2O60241 1585 aa12.12□□□□□ -0.47
LDHB-202ENST00000396075 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
LDHB-202ENST00000396075 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
LDHB-202ENST00000396075 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
LDHB-202ENST00000396075 NUDT16Q96DE0 195 aaKnown RBP12.11□□□□□ -0.47
LDHB-202ENST00000396075 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
LDHB-202ENST00000396075 ATRNO75882 1429 aa12.11□□□□□ -0.47
LDHB-202ENST00000396075 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
LDHB-202ENST00000396075 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
LDHB-202ENST00000396075 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
LDHB-202ENST00000396075 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
LDHB-202ENST00000396075 KIAA1210Q9ULL0 1709 aa12.1□□□□□ -0.47
LDHB-202ENST00000396075 TULP4Q9NRJ4 1543 aa12.1□□□□□ -0.47
LDHB-202ENST00000396075 CAPN15O75808 1086 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms