RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 TMF1P82094 1093 aa19.75■□□□□ 0.75
RTFDC1-203ENST00000395881 PIK3C2GO75747 1445 aa19.75■□□□□ 0.75
RTFDC1-203ENST00000395881 NCOA3Q9Y6Q9 1424 aa19.74■□□□□ 0.75
RTFDC1-203ENST00000395881 MSH6P52701 1360 aa19.73■□□□□ 0.75
RTFDC1-203ENST00000395881 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.72■□□□□ 0.75
RTFDC1-203ENST00000395881 CDCA8Q53HL2 280 aa19.71■□□□□ 0.75
RTFDC1-203ENST00000395881 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
RTFDC1-203ENST00000395881 DISP3Q9P2K9 1392 aa19.7■□□□□ 0.74
RTFDC1-203ENST00000395881 POLR3GLQ9BT43 218 aa19.7■□□□□ 0.74
RTFDC1-203ENST00000395881 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
RTFDC1-203ENST00000395881 C14orf37Q86TY3 774 aa19.7■□□□□ 0.74
RTFDC1-203ENST00000395881 C14orf93Q9H972 538 aaKnown RBP19.7■□□□□ 0.74
RTFDC1-203ENST00000395881 ROBO2Q9HCK4 1378 aa19.69■□□□□ 0.74
RTFDC1-203ENST00000395881 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
RTFDC1-203ENST00000395881 C19orf44Q9H6X5 657 aa19.69■□□□□ 0.74
RTFDC1-203ENST00000395881 SBNO2Q9Y2G9 1366 aa19.68■□□□□ 0.74
RTFDC1-203ENST00000395881 RALBP1Q15311 655 aa19.68■□□□□ 0.74
RTFDC1-203ENST00000395881 PTCH1Q13635 1447 aa19.67■□□□□ 0.74
RTFDC1-203ENST00000395881 HSPA1LP34931 641 aa19.67■□□□□ 0.74
RTFDC1-203ENST00000395881 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
RTFDC1-203ENST00000395881 SLAIN2Q9P270 581 aa19.66■□□□□ 0.74
RTFDC1-203ENST00000395881 LRPPRCP42704 1394 aaKnown RBP19.65■□□□□ 0.74
RTFDC1-203ENST00000395881 FAM135BQ49AJ0 1406 aa19.65■□□□□ 0.74
RTFDC1-203ENST00000395881 NALCNQ8IZF0 1738 aa19.65■□□□□ 0.74
RTFDC1-203ENST00000395881 STK26Q9P289 416 aa19.65■□□□□ 0.74
RTFDC1-203ENST00000395881 ADGRB1O14514 1584 aa19.64■□□□□ 0.73
RTFDC1-203ENST00000395881 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
RTFDC1-203ENST00000395881 ROBO1Q9Y6N7 1651 aa19.63■□□□□ 0.73
RTFDC1-203ENST00000395881 KNDC1Q76NI1 1749 aa19.63■□□□□ 0.73
RTFDC1-203ENST00000395881 CADPS2Q86UW7 1296 aa19.63■□□□□ 0.73
RTFDC1-203ENST00000395881 ABCC11Q96J66 1382 aa19.63■□□□□ 0.73
RTFDC1-203ENST00000395881 TECPR2O15040 1411 aa19.63■□□□□ 0.73
RTFDC1-203ENST00000395881 YTHDC2Q9H6S0 1430 aaKnown RBP19.63■□□□□ 0.73
RTFDC1-203ENST00000395881 ADGRL3Q9HAR2 1447 aa19.63■□□□□ 0.73
RTFDC1-203ENST00000395881 ATF3P18847 181 aa19.62■□□□□ 0.73
RTFDC1-203ENST00000395881 DCCP43146 1447 aa19.61■□□□□ 0.73
RTFDC1-203ENST00000395881 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
RTFDC1-203ENST00000395881 PARD3Q8TEW0 1356 aa19.61■□□□□ 0.73
RTFDC1-203ENST00000395881 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
RTFDC1-203ENST00000395881 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
RTFDC1-203ENST00000395881 WAPLQ7Z5K2 1190 aa19.6■□□□□ 0.73
RTFDC1-203ENST00000395881 PLEKHH1Q9ULM0 1364 aa19.58■□□□□ 0.72
RTFDC1-203ENST00000395881 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
RTFDC1-203ENST00000395881 SIRT1Q96EB6 747 aa19.57■□□□□ 0.72
RTFDC1-203ENST00000395881 MYOM1P52179 1685 aa19.56■□□□□ 0.72
RTFDC1-203ENST00000395881 MST1RQ04912 1400 aa19.56■□□□□ 0.72
RTFDC1-203ENST00000395881 PANK3Q9H999 370 aa19.55■□□□□ 0.72
RTFDC1-203ENST00000395881 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
RTFDC1-203ENST00000395881 CENPJQ9HC77 1338 aaPredicted RBP19.54■□□□□ 0.72
RTFDC1-203ENST00000395881 NLRP13Q86W25 1043 aa19.53■□□□□ 0.72
RTFDC1-203ENST00000395881 ZBED9Q6R2W3 1325 aa19.53■□□□□ 0.72
RTFDC1-203ENST00000395881 DLC1Q96QB1 1528 aa19.53■□□□□ 0.72
RTFDC1-203ENST00000395881 BRINP3Q76B58 766 aa19.53■□□□□ 0.72
RTFDC1-203ENST00000395881 QRICH2Q9H0J4 1663 aa19.52■□□□□ 0.72
RTFDC1-203ENST00000395881 TMC1Q8TDI8 760 aa19.52■□□□□ 0.71
RTFDC1-203ENST00000395881 PUS7Q96PZ0 661 aaKnown RBP19.52■□□□□ 0.71
RTFDC1-203ENST00000395881 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
RTFDC1-203ENST00000395881 FAM9BQ8IZU0 186 aa19.51■□□□□ 0.71
RTFDC1-203ENST00000395881 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
RTFDC1-203ENST00000395881 TRAK1Q9UPV9 953 aa19.51■□□□□ 0.71
RTFDC1-203ENST00000395881 CDC42BPGQ6DT37 1551 aa19.51■□□□□ 0.71
RTFDC1-203ENST00000395881 ARHGEF28Q8N1W1 1705 aaKnown RBP19.51■□□□□ 0.71
RTFDC1-203ENST00000395881 C1orf167Q5SNV9 1468 aa19.5■□□□□ 0.71
RTFDC1-203ENST00000395881 INSRP06213 1382 aa19.5■□□□□ 0.71
RTFDC1-203ENST00000395881 PRAM1Q96QH2 718 aa19.5■□□□□ 0.71
RTFDC1-203ENST00000395881 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
RTFDC1-203ENST00000395881 AHDC1Q5TGY3 1603 aaPredicted RBP19.47■□□□□ 0.71
RTFDC1-203ENST00000395881 POGKQ9P215 609 aa19.47■□□□□ 0.71
RTFDC1-203ENST00000395881 KNSTRNQ9Y448 316 aa19.47■□□□□ 0.71
RTFDC1-203ENST00000395881 COL16A1Q07092 1604 aaPredicted RBP19.47■□□□□ 0.71
RTFDC1-203ENST00000395881 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
RTFDC1-203ENST00000395881 FMN2Q9NZ56 1722 aa19.46■□□□□ 0.71
RTFDC1-203ENST00000395881 NHSL1Q5SYE7 1610 aa19.45■□□□□ 0.7
RTFDC1-203ENST00000395881 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
RTFDC1-203ENST00000395881 AMER1Q5JTC6 1135 aaPredicted RBP19.44■□□□□ 0.7
RTFDC1-203ENST00000395881 DDX17Q92841 729 aaKnown RBP19.44■□□□□ 0.7
RTFDC1-203ENST00000395881 RGPD8O14715 1765 aaPredicted RBP19.43■□□□□ 0.7
RTFDC1-203ENST00000395881 MED1Q15648 1581 aaPredicted RBP19.41■□□□□ 0.7
RTFDC1-203ENST00000395881 ADGRB2O60241 1585 aa19.4■□□□□ 0.7
RTFDC1-203ENST00000395881 MINK1Q8N4C8 1332 aaPredicted RBP19.4■□□□□ 0.7
RTFDC1-203ENST00000395881 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
RTFDC1-203ENST00000395881 ESCO1Q5FWF5 840 aa19.4■□□□□ 0.7
RTFDC1-203ENST00000395881 EVC2Q86UK5 1308 aa19.39■□□□□ 0.69
RTFDC1-203ENST00000395881 CC2D1BQ5T0F9 858 aaKnown RBP19.39■□□□□ 0.69
RTFDC1-203ENST00000395881 USP32Q8NFA0 1604 aa19.39■□□□□ 0.69
RTFDC1-203ENST00000395881 CNGB1Q14028 1251 aaPredicted RBP19.38■□□□□ 0.69
RTFDC1-203ENST00000395881 JCADQ9P266 1359 aa19.37■□□□□ 0.69
RTFDC1-203ENST00000395881 NINLQ9Y2I6 1382 aa19.37■□□□□ 0.69
RTFDC1-203ENST00000395881 NEFLP07196 543 aa19.36■□□□□ 0.69
RTFDC1-203ENST00000395881 TULP4Q9NRJ4 1543 aa19.36■□□□□ 0.69
RTFDC1-203ENST00000395881 SHPRHQ149N8 1683 aa19.35■□□□□ 0.69
RTFDC1-203ENST00000395881 SOS2Q07890 1332 aaPredicted RBP19.34■□□□□ 0.69
RTFDC1-203ENST00000395881 WASLO00401 505 aaPredicted RBP19.34■□□□□ 0.69
RTFDC1-203ENST00000395881 SMG6Q86US8 1419 aaKnown RBP19.33■□□□□ 0.69
RTFDC1-203ENST00000395881 FOXO3O43524 673 aa19.33■□□□□ 0.69
RTFDC1-203ENST00000395881 PPP2R1AP30153 589 aa19.32■□□□□ 0.68
RTFDC1-203ENST00000395881 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
RTFDC1-203ENST00000395881 PRR36Q9H6K5 1346 aa19.32■□□□□ 0.68
RTFDC1-203ENST00000395881 KIF1AQ12756 1690 aa19.32■□□□□ 0.68
RTFDC1-203ENST00000395881 BLMP54132 1417 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms