RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 TCP11L2Q8N4U5 519 aa21.01■□□□□ 0.95
UBFD1-201ENST00000395878 CCDC73Q6ZRK6 1079 aa21■□□□□ 0.95
UBFD1-201ENST00000395878 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
UBFD1-201ENST00000395878 TRIM34Q9BYJ4 488 aa21■□□□□ 0.95
UBFD1-201ENST00000395878 NINLQ9Y2I6 1382 aa20.99■□□□□ 0.95
UBFD1-201ENST00000395878 PPP2R1AP30153 589 aa20.99■□□□□ 0.95
UBFD1-201ENST00000395878 PCMTD1Q96MG8 357 aaPredicted RBP20.99■□□□□ 0.95
UBFD1-201ENST00000395878 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
UBFD1-201ENST00000395878 SAFBQ15424 915 aaKnown RBP eCLIP20.98■□□□□ 0.95
UBFD1-201ENST00000395878 TMEM132EQ6IEE7 984 aa20.98■□□□□ 0.95
UBFD1-201ENST00000395878 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.98■□□□□ 0.95
UBFD1-201ENST00000395878 GNAI3P08754 354 aa20.98■□□□□ 0.95
UBFD1-201ENST00000395878 NFKBIBQ15653 356 aa20.98■□□□□ 0.95
UBFD1-201ENST00000395878 SCAPERQ9BY12 1400 aa20.98■□□□□ 0.95
UBFD1-201ENST00000395878 HFM1A2PYH4 1435 aa20.97■□□□□ 0.95
UBFD1-201ENST00000395878 RALYLQ86SE5 291 aaKnown RBP20.97■□□□□ 0.95
UBFD1-201ENST00000395878 HOMER1Q86YM7 354 aa20.97■□□□□ 0.95
UBFD1-201ENST00000395878 SYTL4Q96C24 671 aaPredicted RBP20.96■□□□□ 0.95
UBFD1-201ENST00000395878 ARHGAP5Q13017 1502 aa20.96■□□□□ 0.95
UBFD1-201ENST00000395878 PSMA5P28066 241 aa20.96■□□□□ 0.95
UBFD1-201ENST00000395878 DHX16O60231 1041 aaKnown RBP20.95■□□□□ 0.95
UBFD1-201ENST00000395878 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.95■□□□□ 0.95
UBFD1-201ENST00000395878 CNTROBQ8N137 903 aa20.95■□□□□ 0.94
UBFD1-201ENST00000395878 GAS2L2Q8NHY3 880 aa20.95■□□□□ 0.94
UBFD1-201ENST00000395878 TCEAL9Q9UHQ7 104 aa20.95■□□□□ 0.94
UBFD1-201ENST00000395878 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.941e-6■■■■■ 29.3
UBFD1-201ENST00000395878 FAM69CQ0P6D2 419 aa20.95■□□□□ 0.94
UBFD1-201ENST00000395878 CFAP70Q5T0N1 1121 aa20.95■□□□□ 0.94
UBFD1-201ENST00000395878 NEUROD6Q96NK8 337 aa20.95■□□□□ 0.94
UBFD1-201ENST00000395878 CCDC30Q5VVM6 783 aa20.95■□□□□ 0.94
UBFD1-201ENST00000395878 PDE3AQ14432 1141 aa20.94■□□□□ 0.94
UBFD1-201ENST00000395878 CDCA7LQ96GN5 454 aa20.94■□□□□ 0.94
UBFD1-201ENST00000395878 MRE11P49959 708 aa20.94■□□□□ 0.94
UBFD1-201ENST00000395878 NLRP6P59044 892 aa20.94■□□□□ 0.94
UBFD1-201ENST00000395878 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
UBFD1-201ENST00000395878 RAD21O60216 631 aa20.93■□□□□ 0.94
UBFD1-201ENST00000395878 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
UBFD1-201ENST00000395878 PRM3Q9NNZ6 103 aa20.93■□□□□ 0.94
UBFD1-201ENST00000395878 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
UBFD1-201ENST00000395878 CLASRPQ8N2M8 674 aaKnown RBP20.93■□□□□ 0.94
UBFD1-201ENST00000395878 NLRP2Q9NX02 1062 aa20.92■□□□□ 0.94
UBFD1-201ENST00000395878 MSH5O43196 834 aa20.92■□□□□ 0.94
UBFD1-201ENST00000395878 WASHC4Q2M389 1173 aa20.92■□□□□ 0.94
UBFD1-201ENST00000395878 SETQ01105 290 aaPredicted RBP20.92■□□□□ 0.94
UBFD1-201ENST00000395878 CTDP1Q9Y5B0 961 aaPredicted RBP20.92■□□□□ 0.94
UBFD1-201ENST00000395878 ATF3P18847 181 aa20.91■□□□□ 0.94
UBFD1-201ENST00000395878 EXOSC9Q06265 439 aaKnown RBP20.91■□□□□ 0.94
UBFD1-201ENST00000395878 SYNJ2O15056 1496 aa20.91■□□□□ 0.94
UBFD1-201ENST00000395878 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
UBFD1-201ENST00000395878 PRKAR2BP31323 418 aa20.91■□□□□ 0.94
UBFD1-201ENST00000395878 GCC1Q96CN9 775 aa20.91■□□□□ 0.94
UBFD1-201ENST00000395878 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
UBFD1-201ENST00000395878 MCM2P49736 904 aa20.91■□□□□ 0.94
UBFD1-201ENST00000395878 PDZRN3Q9UPQ7 1066 aa20.9■□□□□ 0.94
UBFD1-201ENST00000395878 FSD1Q9BTV5 496 aa20.9■□□□□ 0.94
UBFD1-201ENST00000395878 NAT10Q9H0A0 1025 aaKnown RBP20.9■□□□□ 0.94
UBFD1-201ENST00000395878 KIAA1107Q9UPP5 1409 aa20.89■□□□□ 0.93
UBFD1-201ENST00000395878 SURF6O75683 361 aaKnown RBP20.89■□□□□ 0.93
UBFD1-201ENST00000395878 AFAP1Q8N556 730 aa20.89■□□□□ 0.93
UBFD1-201ENST00000395878 CFTRP13569 1480 aa20.89■□□□□ 0.93
UBFD1-201ENST00000395878 VSIG10Q8N0Z9 540 aa20.89■□□□□ 0.93
UBFD1-201ENST00000395878 TWISTNBQ3B726 338 aaPredicted RBP20.88■□□□□ 0.93
UBFD1-201ENST00000395878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.88■□□□□ 0.93
UBFD1-201ENST00000395878 MBD3O95983 291 aa20.88■□□□□ 0.93
UBFD1-201ENST00000395878 RABEP1Q15276 862 aa20.88■□□□□ 0.93
UBFD1-201ENST00000395878 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
UBFD1-201ENST00000395878 CCDC39Q9UFE4 941 aa20.88■□□□□ 0.93
UBFD1-201ENST00000395878 HIP1O00291 1037 aa20.88■□□□□ 0.93
UBFD1-201ENST00000395878 NASPP49321 788 aaPredicted RBP20.88■□□□□ 0.93
UBFD1-201ENST00000395878 FOSBP53539 338 aa20.88■□□□□ 0.93
UBFD1-201ENST00000395878 WWC1Q8IX03 1113 aa20.88■□□□□ 0.93
UBFD1-201ENST00000395878 TEX35Q5T0J7 233 aa20.87■□□□□ 0.93
UBFD1-201ENST00000395878 LETM1O95202 739 aaPredicted RBP20.87■□□□□ 0.93
UBFD1-201ENST00000395878 FAM13BQ9NYF5 915 aa20.87■□□□□ 0.93
UBFD1-201ENST00000395878 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
UBFD1-201ENST00000395878 ZNF771Q7L3S4 317 aaPredicted RBP20.87■□□□□ 0.93
UBFD1-201ENST00000395878 BRMS1Q9HCU9 246 aa20.87■□□□□ 0.93
UBFD1-201ENST00000395878 EHBP1L1Q8N3D4 1523 aa20.86■□□□□ 0.93
UBFD1-201ENST00000395878 GPRASP1Q5JY77 1395 aa20.86■□□□□ 0.93
UBFD1-201ENST00000395878 NUTM2GQ5VZR2 741 aa20.86■□□□□ 0.93
UBFD1-201ENST00000395878 CT47B1P0C2W7 299 aaPredicted RBP20.86■□□□□ 0.93
UBFD1-201ENST00000395878 XBP1P17861 261 aa20.86■□□□□ 0.93
UBFD1-201ENST00000395878 OLFM4Q6UX06 510 aa20.86■□□□□ 0.93
UBFD1-201ENST00000395878 PLEKHO1Q53GL0 409 aaPredicted RBP20.85■□□□□ 0.93
UBFD1-201ENST00000395878 RBM33Q96EV2 1170 aaKnown RBP20.85■□□□□ 0.93
UBFD1-201ENST00000395878 TRAK2O60296 914 aa20.85■□□□□ 0.93
UBFD1-201ENST00000395878 NBPF1Q3BBV0 1214 aa20.85■□□□□ 0.93
UBFD1-201ENST00000395878 ERC1Q8IUD2 1116 aa20.85■□□□□ 0.93
UBFD1-201ENST00000395878 FBXW7Q969H0 707 aa20.85■□□□□ 0.93
UBFD1-201ENST00000395878 PDCP20941 246 aa20.85■□□□□ 0.93
UBFD1-201ENST00000395878 ARGLU1Q9NWB6 273 aaPredicted RBP20.85■□□□□ 0.93
UBFD1-201ENST00000395878 SDF4Q9BRK5 362 aa20.84■□□□□ 0.93
UBFD1-201ENST00000395878 PLEKHH2Q8IVE3 1493 aa20.84■□□□□ 0.93
UBFD1-201ENST00000395878 NEK4P51957 841 aa20.84■□□□□ 0.93
UBFD1-201ENST00000395878 C9orf84Q5VXU9 1444 aa20.84■□□□□ 0.93
UBFD1-201ENST00000395878 GNAI2P04899 355 aa20.84■□□□□ 0.93
UBFD1-201ENST00000395878 MNS1Q8NEH6 495 aa20.84■□□□□ 0.93
UBFD1-201ENST00000395878 TBC1D2BQ9UPU7 963 aa20.82■□□□□ 0.92
UBFD1-201ENST00000395878 WDR63Q8IWG1 891 aa20.82■□□□□ 0.92
UBFD1-201ENST00000395878 ABTB2Q8N961 1025 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms