RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 PRDM10Q9NQV6 1147 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 RNF214Q8ND24 703 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 ZNHIT6Q9NWK9 470 aaKnown RBP9.56□□□□□ -0.88
TRPS1-203ENST00000395715 TXLNBQ8N3L3 684 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 ANO2Q9NQ90 1003 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 LRRFIP2Q9Y608 721 aaKnown RBP9.56□□□□□ -0.88
TRPS1-203ENST00000395715 DHX16O60231 1041 aaKnown RBP9.56□□□□□ -0.88
TRPS1-203ENST00000395715 DHX8Q14562 1220 aaKnown RBP9.56□□□□□ -0.88
TRPS1-203ENST00000395715 SOGA3Q5TF21 947 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 SPC24Q8NBT2 197 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 SMC3Q9UQE7 1217 aa9.56□□□□□ -0.88
TRPS1-203ENST00000395715 BRPF1P55201 1214 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-203ENST00000395715 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRPS1-203ENST00000395715 GTF2E1P29083 439 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-203ENST00000395715 BBXQ8WY36 941 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-203ENST00000395715 ANKRD45Q5TZF3 282 aa9.55□□□□□ -0.88
TRPS1-203ENST00000395715 RUFY2Q8WXA3 655 aa9.55□□□□□ -0.88
TRPS1-203ENST00000395715 KLHL34Q8N239 644 aa9.55□□□□□ -0.88
TRPS1-203ENST00000395715 SDF4Q9BRK5 362 aa9.55□□□□□ -0.88
TRPS1-203ENST00000395715 ERICH2A1L162 156 aa9.55□□□□□ -0.88
TRPS1-203ENST00000395715 SETSIPP0DME0 302 aa9.55□□□□□ -0.88
TRPS1-203ENST00000395715 SUDS3Q9H7L9 328 aaPredicted RBP9.55□□□□□ -0.88
TRPS1-203ENST00000395715 PDCL2Q8N4E4 241 aa9.55□□□□□ -0.88
TRPS1-203ENST00000395715 VGFO15240 615 aaPredicted RBP9.54□□□□□ -0.88
TRPS1-203ENST00000395715 MNAT1P51948 309 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
TRPS1-203ENST00000395715 KIF3CO14782 793 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 FYB1O15117 783 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 CWC22Q9HCG8 908 aaKnown RBP9.54□□□□□ -0.88
TRPS1-203ENST00000395715 TXLNAP40222 546 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 TSPY26PQ9H489 355 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 TRDNQ13061 729 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 NFXL1Q6ZNB6 911 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
TRPS1-203ENST00000395715 CRACR2AQ9BSW2 395 aa9.54□□□□□ -0.88
TRPS1-203ENST00000395715 CPSF2Q9P2I0 782 aaKnown RBP9.54□□□□□ -0.88
TRPS1-203ENST00000395715 CBX1P83916 185 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 DNAJC2Q99543 621 aaKnown RBP9.53□□□□□ -0.88
TRPS1-203ENST00000395715 RNF187Q5TA31 235 aaPredicted RBP9.53□□□□□ -0.88
TRPS1-203ENST00000395715 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
TRPS1-203ENST00000395715 EIF3AQ14152 1382 aaKnown RBP9.53□□□□□ -0.88
TRPS1-203ENST00000395715 ANKRD18BA2A2Z9 1011 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 CCDC160A6NGH7 325 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 WWC2Q6AWC2 1192 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 LUZP1Q86V48 1076 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 ZCCHC6Q5VYS8 1495 aaKnown RBP9.53□□□□□ -0.88
TRPS1-203ENST00000395715 CENPJQ9HC77 1338 aaPredicted RBP9.53□□□□□ -0.88
TRPS1-203ENST00000395715 DCAF8L1A6NGE4 600 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 NFKBIBQ15653 356 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 BRMS1Q9HCU9 246 aa9.53□□□□□ -0.88
TRPS1-203ENST00000395715 NAP1L3Q99457 506 aaPredicted RBP9.53□□□□□ -0.88
TRPS1-203ENST00000395715 DNAAF4Q8WXU2 420 aa9.52□□□□□ -0.88
TRPS1-203ENST00000395715 FOSBP53539 338 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 PAIP2Q9BPZ3 127 aaKnown RBP9.52□□□□□ -0.89
TRPS1-203ENST00000395715 U2AF1L5P0DN76 240 aaPredicted RBP9.52□□□□□ -0.89
TRPS1-203ENST00000395715 U2AF1Q01081 240 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRPS1-203ENST00000395715 KIAA1328Q86T90 577 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 CCDC113Q9H0I3 377 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 BRPF3Q9ULD4 1205 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 TIGD1Q96MW7 591 aa9.52□□□□□ -0.89
TRPS1-203ENST00000395715 KINO60870 393 aaKnown RBP9.51□□□□□ -0.89
TRPS1-203ENST00000395715 FAM184BQ9ULE4 1060 aa9.51□□□□□ -0.89
TRPS1-203ENST00000395715 TDO2P48775 406 aa9.51□□□□□ -0.89
TRPS1-203ENST00000395715 EIF4G1Q04637 1599 aaKnown RBP9.51□□□□□ -0.89
TRPS1-203ENST00000395715 SERPINC1P01008 464 aa9.51□□□□□ -0.89
TRPS1-203ENST00000395715 PPFIBP1Q86W92 1011 aa9.51□□□□□ -0.89
TRPS1-203ENST00000395715 KIF7Q2M1P5 1343 aa9.51□□□□□ -0.89
TRPS1-203ENST00000395715 MAP9Q49MG5 647 aa9.5□□□□□ -0.89
TRPS1-203ENST00000395715 HDGFL2Q7Z4V5 671 aaPredicted RBP9.5□□□□□ -0.89
TRPS1-203ENST00000395715 FMNL2Q96PY5 1086 aa9.5□□□□□ -0.89
TRPS1-203ENST00000395715 UBE4AQ14139 1066 aa9.5□□□□□ -0.89
TRPS1-203ENST00000395715 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.5□□□□□ -0.89
TRPS1-203ENST00000395715 V9GYY5 206 aaPredicted RBP9.5□□□□□ -0.89
TRPS1-203ENST00000395715 TRAK2O60296 914 aa9.5□□□□□ -0.89
TRPS1-203ENST00000395715 PIP4K2AP48426 406 aaPredicted RBP9.5□□□□□ -0.89
TRPS1-203ENST00000395715 C6orf163Q5TEZ5 329 aa9.5□□□□□ -0.89
TRPS1-203ENST00000395715 HSP90AB4PQ58FF6 505 aa9.5□□□□□ -0.89
TRPS1-203ENST00000395715 GBP3Q9H0R5 595 aa9.5□□□□□ -0.89
TRPS1-203ENST00000395715 TMEM132AQ24JP5 1023 aa9.49□□□□□ -0.89
TRPS1-203ENST00000395715 ZHX1Q9UKY1 873 aaPredicted RBP9.49□□□□□ -0.89
TRPS1-203ENST00000395715 XBP1P17861 261 aa9.49□□□□□ -0.89
TRPS1-203ENST00000395715 GGT6Q6P531 493 aa9.49□□□□□ -0.89
TRPS1-203ENST00000395715 EVA1CP58658 441 aa9.49□□□□□ -0.89
TRPS1-203ENST00000395715 SMC1AQ14683 1233 aaKnown RBP9.49□□□□□ -0.89
TRPS1-203ENST00000395715 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.49□□□□□ -0.89
TRPS1-203ENST00000395715 DDX46Q7L014 1031 aaKnown RBP9.49□□□□□ -0.89
TRPS1-203ENST00000395715 GCOM1H8Y6P7 765 aaPredicted RBP9.49□□□□□ -0.89
TRPS1-203ENST00000395715 MYZAPP0CAP1 466 aa9.49□□□□□ -0.89
TRPS1-203ENST00000395715 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
TRPS1-203ENST00000395715 HMGB1P09429 215 aaKnown RBP9.48□□□□□ -0.89
TRPS1-203ENST00000395715 MCM3P25205 808 aa9.48□□□□□ -0.89
TRPS1-203ENST00000395715 UBE2Q2Q8WVN8 375 aa9.48□□□□□ -0.89
TRPS1-203ENST00000395715 UBXN4Q92575 508 aa9.48□□□□□ -0.89
TRPS1-203ENST00000395715 PDCL3Q9H2J4 239 aa9.48□□□□□ -0.89
TRPS1-203ENST00000395715 JAKMIP3Q5VZ66 844 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms