RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CADPS2Q86UW7 1296 aa28.55■■■□□ 2.16
SNCA-203ENST00000394986 DCCP43146 1447 aa28.55■■■□□ 2.16
SNCA-203ENST00000394986 SIRT1Q96EB6 747 aa28.54■■■□□ 2.16
SNCA-203ENST00000394986 SLAIN2Q9P270 581 aa28.52■■■□□ 2.16
SNCA-203ENST00000394986 POGKQ9P215 609 aa28.52■■■□□ 2.16
SNCA-203ENST00000394986 ROCK2O75116 1388 aaKnown RBP28.5■■■□□ 2.15
SNCA-203ENST00000394986 MST1RQ04912 1400 aa28.49■■■□□ 2.15
SNCA-203ENST00000394986 ARHGEF28Q8N1W1 1705 aaKnown RBP28.48■■■□□ 2.15
SNCA-203ENST00000394986 CDC42BPGQ6DT37 1551 aa28.47■■■□□ 2.15
SNCA-203ENST00000394986 ROBO1Q9Y6N7 1651 aa28.46■■■□□ 2.15
SNCA-203ENST00000394986 RALGAPBQ86X10 1494 aa28.45■■■□□ 2.14
SNCA-203ENST00000394986 MINK1Q8N4C8 1332 aaPredicted RBP28.44■■■□□ 2.14
SNCA-203ENST00000394986 HSPA1LP34931 641 aa28.43■■■□□ 2.14
SNCA-203ENST00000394986 HIRIP3Q9BW71 556 aaPredicted RBP28.43■■■□□ 2.14
SNCA-203ENST00000394986 TIMELESSQ9UNS1 1208 aa28.42■■■□□ 2.14
SNCA-203ENST00000394986 GPRASP1Q5JY77 1395 aa28.42■■■□□ 2.14
SNCA-203ENST00000394986 C1orf167Q5SNV9 1468 aa28.42■■■□□ 2.14
SNCA-203ENST00000394986 NUTM2FA1L443 756 aa28.41■■■□□ 2.14
SNCA-203ENST00000394986 BRINP3Q76B58 766 aa28.4■■■□□ 2.14
SNCA-203ENST00000394986 CARD11Q9BXL7 1154 aa28.38■■■□□ 2.13
SNCA-203ENST00000394986 ADGRB2O60241 1585 aa28.36■■■□□ 2.13
SNCA-203ENST00000394986 CENPJQ9HC77 1338 aaPredicted RBP28.35■■■□□ 2.13
SNCA-203ENST00000394986 ORAI2Q96SN7 254 aa28.35■■■□□ 2.13
SNCA-203ENST00000394986 FMN2Q9NZ56 1722 aa28.34■■■□□ 2.13
SNCA-203ENST00000394986 DDX17Q92841 729 aaKnown RBP28.3■■■□□ 2.12
SNCA-203ENST00000394986 WASLO00401 505 aaPredicted RBP28.29■■■□□ 2.12
SNCA-203ENST00000394986 EIF3AQ14152 1382 aaKnown RBP28.29■■■□□ 2.12
SNCA-203ENST00000394986 ESCO1Q5FWF5 840 aa28.29■■■□□ 2.12
SNCA-203ENST00000394986 QRICH2Q9H0J4 1663 aa28.28■■■□□ 2.12
SNCA-203ENST00000394986 AHDC1Q5TGY3 1603 aaPredicted RBP28.26■■■□□ 2.12
SNCA-203ENST00000394986 USP32Q8NFA0 1604 aa28.25■■■□□ 2.11
SNCA-203ENST00000394986 PRR36Q9H6K5 1346 aa28.25■■■□□ 2.11
SNCA-203ENST00000394986 PHLPP1O60346 1717 aa28.25■■■□□ 2.11
SNCA-203ENST00000394986 TULP4Q9NRJ4 1543 aa28.24■■■□□ 2.11
SNCA-203ENST00000394986 CDK19Q9BWU1 502 aa28.24■■■□□ 2.11
SNCA-203ENST00000394986 ANKARQ7Z5J8 1434 aa28.23■■■□□ 2.11
SNCA-203ENST00000394986 COL16A1Q07092 1604 aaPredicted RBP28.22■■■□□ 2.11
SNCA-203ENST00000394986 NHSL1Q5SYE7 1610 aa28.21■■■□□ 2.11
SNCA-203ENST00000394986 ATP7BP35670 1465 aa28.19■■■□□ 2.1
SNCA-203ENST00000394986 RGPD8O14715 1765 aaPredicted RBP28.18■■■□□ 2.1
SNCA-203ENST00000394986 FOXO3O43524 673 aa28.18■■■□□ 2.1
SNCA-203ENST00000394986 PHF8Q9UPP1 1060 aa28.18■■■□□ 2.1
SNCA-203ENST00000394986 USP47Q96K76 1375 aa28.17■■■□□ 2.1
SNCA-203ENST00000394986 XPCQ01831 940 aaPredicted RBP28.17■■■□□ 2.1
SNCA-203ENST00000394986 PMFBP1Q8TBY8 1022 aa28.17■■■□□ 2.1
SNCA-203ENST00000394986 NUDT16Q96DE0 195 aaKnown RBP28.17■■■□□ 2.1
SNCA-203ENST00000394986 CABP2Q9NPB3 220 aa28.17■■■□□ 2.1
SNCA-203ENST00000394986 SRPK2P78362 688 aaKnown RBP28.16■■■□□ 2.1
SNCA-203ENST00000394986 ST20-MTHFSA0A0A6YYL1 179 aa28.15■■■□□ 2.1
SNCA-203ENST00000394986 KIF1AQ12756 1690 aa28.14■■■□□ 2.1
SNCA-203ENST00000394986 NPHP3Q7Z494 1330 aa28.14■■■□□ 2.09
SNCA-203ENST00000394986 EVC2Q86UK5 1308 aa28.13■■■□□ 2.09
SNCA-203ENST00000394986 SBNO2Q9Y2G9 1366 aa28.13■■■□□ 2.09
SNCA-203ENST00000394986 PXDNQ92626 1479 aa28.12■■■□□ 2.09
SNCA-203ENST00000394986 SOS2Q07890 1332 aaPredicted RBP28.12■■■□□ 2.09
SNCA-203ENST00000394986 JCADQ9P266 1359 aa28.09■■■□□ 2.09
SNCA-203ENST00000394986 TESK2Q96S53 571 aa28.09■■■□□ 2.09
SNCA-203ENST00000394986 TOPAZ1Q8N9V7 1692 aa28.07■■■□□ 2.08
SNCA-203ENST00000394986 LRRC59Q96AG4 307 aaKnown RBP28.07■■■□□ 2.08
SNCA-203ENST00000394986 CCDC61Q9Y6R9 512 aa28.07■■■□□ 2.08
SNCA-203ENST00000394986 PPIP5K1Q6PFW1 1433 aa28.05■■■□□ 2.08
SNCA-203ENST00000394986 KRT28Q7Z3Y7 464 aa28.05■■■□□ 2.08
SNCA-203ENST00000394986 ITSN1Q15811 1721 aa28.05■■■□□ 2.08
SNCA-203ENST00000394986 NGDNQ8NEJ9 315 aaKnown RBP28.04■■■□□ 2.08
SNCA-203ENST00000394986 PNPLA6Q8IY17 1366 aa28.03■■■□□ 2.08
SNCA-203ENST00000394986 PSME1Q06323 249 aa28.03■■■□□ 2.08
SNCA-203ENST00000394986 SHPRHQ149N8 1683 aa28.01■■■□□ 2.07
SNCA-203ENST00000394986 CABP1Q9NZU7 370 aa28.01■■■□□ 2.07
SNCA-203ENST00000394986 ACEP12821 1306 aa28■■■□□ 2.07
SNCA-203ENST00000394986 PLEKHG3A1L390 1219 aa28■■■□□ 2.07
SNCA-203ENST00000394986 MED1Q15648 1581 aaPredicted RBP27.99■■■□□ 2.07
SNCA-203ENST00000394986 DISP3Q9P2K9 1392 aa27.99■■■□□ 2.07
SNCA-203ENST00000394986 POLR3AO14802 1390 aaPredicted RBP27.98■■■□□ 2.07
SNCA-203ENST00000394986 ATAD2Q6PL18 1390 aa27.98■■■□□ 2.07
SNCA-203ENST00000394986 SPATA31A3Q5VYP0 1347 aa27.97■■■□□ 2.07
SNCA-203ENST00000394986 HSPA5P11021 654 aaKnown RBP27.97■■■□□ 2.07
SNCA-203ENST00000394986 TNS3Q68CZ2 1445 aa27.96■■■□□ 2.07
SNCA-203ENST00000394986 EIF4G2P78344 907 aaKnown RBP eCLIP27.96■■■□□ 2.07
SNCA-203ENST00000394986 LRP6O75581 1613 aa27.95■■■□□ 2.07
SNCA-203ENST00000394986 NUTM2BA6NNL0 878 aaPredicted RBP27.95■■■□□ 2.07
SNCA-203ENST00000394986 NUTM2EB1AL46 878 aaPredicted RBP27.95■■■□□ 2.07
SNCA-203ENST00000394986 NUTM2AQ8IVF1 878 aaPredicted RBP27.95■■■□□ 2.07
SNCA-203ENST00000394986 SPATA31A6Q5VVP1 1343 aa27.95■■■□□ 2.06
SNCA-203ENST00000394986 SBNO1A3KN83 1393 aa27.94■■■□□ 2.06
SNCA-203ENST00000394986 TMF1P82094 1093 aa27.93■■■□□ 2.06
SNCA-203ENST00000394986 TRPM3Q9HCF6 1732 aaPredicted RBP27.93■■■□□ 2.06
SNCA-203ENST00000394986 LMOD2Q6P5Q4 547 aa27.92■■■□□ 2.06
SNCA-203ENST00000394986 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
SNCA-203ENST00000394986 PLEKHG5O94827 1062 aa27.9■■■□□ 2.06
SNCA-203ENST00000394986 TMC1Q8TDI8 760 aa27.9■■■□□ 2.06
SNCA-203ENST00000394986 SLC24A1O60721 1099 aa27.89■■■□□ 2.06
SNCA-203ENST00000394986 COL22A1Q8NFW1 1626 aaPredicted RBP27.88■■■□□ 2.05
SNCA-203ENST00000394986 PUS7Q96PZ0 661 aaKnown RBP27.87■■■□□ 2.05
SNCA-203ENST00000394986 SLC12A5Q9H2X9 1139 aa27.87■■■□□ 2.05
SNCA-203ENST00000394986 USP6P35125 1406 aa27.86■■■□□ 2.05
SNCA-203ENST00000394986 ARHGEF10O15013 1369 aa27.85■■■□□ 2.05
SNCA-203ENST00000394986 ALS2Q96Q42 1657 aa27.85■■■□□ 2.05
SNCA-203ENST00000394986 CABLES1Q8TDN4 633 aa27.84■■■□□ 2.05
SNCA-203ENST00000394986 CD163L1Q9NR16 1453 aa27.84■■■□□ 2.05
SNCA-203ENST00000394986 MEX3CQ5U5Q3 659 aaKnown RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms