RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 APBB1O00213 710 aa20.49■□□□□ 0.87
SMARCD1-202ENST00000394963 XPCQ01831 940 aaPredicted RBP20.49■□□□□ 0.87
SMARCD1-202ENST00000394963 ITPRIPQ8IWB1 547 aa20.49■□□□□ 0.87
SMARCD1-202ENST00000394963 PRKAR2BP31323 418 aa20.48■□□□□ 0.87
SMARCD1-202ENST00000394963 NUDT16Q96DE0 195 aaKnown RBP20.47■□□□□ 0.87
SMARCD1-202ENST00000394963 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
SMARCD1-202ENST00000394963 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
SMARCD1-202ENST00000394963 AMPHP49418 695 aa20.46■□□□□ 0.87
SMARCD1-202ENST00000394963 PLEKHH1Q9ULM0 1364 aa20.46■□□□□ 0.87
SMARCD1-202ENST00000394963 FYB1O15117 783 aa20.45■□□□□ 0.86
SMARCD1-202ENST00000394963 RTL5Q5HYW3 569 aaPredicted RBP20.45■□□□□ 0.86
SMARCD1-202ENST00000394963 NECTIN2Q92692 538 aa20.45■□□□□ 0.86
SMARCD1-202ENST00000394963 SLC4A3P48751 1232 aa20.44■□□□□ 0.86
SMARCD1-202ENST00000394963 DCTN1Q14203 1278 aa20.44■□□□□ 0.86
SMARCD1-202ENST00000394963 DUSP27Q5VZP5 1158 aa20.44■□□□□ 0.86
SMARCD1-202ENST00000394963 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
SMARCD1-202ENST00000394963 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
SMARCD1-202ENST00000394963 EXOSC9Q06265 439 aaKnown RBP20.43■□□□□ 0.86
SMARCD1-202ENST00000394963 SLFN5Q08AF3 891 aa20.42■□□□□ 0.86
SMARCD1-202ENST00000394963 TNNQ9UQP3 1299 aa20.41■□□□□ 0.86
SMARCD1-202ENST00000394963 CLTCL1P53675 1640 aa20.41■□□□□ 0.86
SMARCD1-202ENST00000394963 A0A0G2JS52 829 aa20.41■□□□□ 0.86
SMARCD1-202ENST00000394963 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
SMARCD1-202ENST00000394963 NLRP6P59044 892 aa20.4■□□□□ 0.86
SMARCD1-202ENST00000394963 PLXNC1O60486 1568 aa20.4■□□□□ 0.86
SMARCD1-202ENST00000394963 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.86
SMARCD1-202ENST00000394963 IQGAP3Q86VI3 1631 aa20.39■□□□□ 0.85
SMARCD1-202ENST00000394963 PTPRTO14522 1441 aa20.39■□□□□ 0.85
SMARCD1-202ENST00000394963 CCDC61Q9Y6R9 512 aa20.39■□□□□ 0.85
SMARCD1-202ENST00000394963 E9PCH4 1651 aa20.39■□□□□ 0.85
SMARCD1-202ENST00000394963 ZNF428Q96B54 188 aa20.38■□□□□ 0.85
SMARCD1-202ENST00000394963 WASLO00401 505 aaPredicted RBP20.37■□□□□ 0.85
SMARCD1-202ENST00000394963 ANP32EQ9BTT0 268 aa20.37■□□□□ 0.85
SMARCD1-202ENST00000394963 PDE4AP27815 886 aa20.36■□□□□ 0.85
SMARCD1-202ENST00000394963 SULT6B1Q6IMI4 303 aa20.36■□□□□ 0.85
SMARCD1-202ENST00000394963 A0A1W2PP64 1363 aa20.36■□□□□ 0.85
SMARCD1-202ENST00000394963 TRPM2O94759 1503 aa20.36■□□□□ 0.85
SMARCD1-202ENST00000394963 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
SMARCD1-202ENST00000394963 UNC13BO14795 1591 aa20.35■□□□□ 0.85
SMARCD1-202ENST00000394963 SPRYD3Q8NCJ5 442 aa20.35■□□□□ 0.85
SMARCD1-202ENST00000394963 ASXL1Q8IXJ9 1541 aa20.35■□□□□ 0.85
SMARCD1-202ENST00000394963 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
SMARCD1-202ENST00000394963 LTKP29376 864 aa20.34■□□□□ 0.85
SMARCD1-202ENST00000394963 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
SMARCD1-202ENST00000394963 FAM83GA6ND36 823 aa20.34■□□□□ 0.85
SMARCD1-202ENST00000394963 ABCA9Q8IUA7 1624 aa20.33■□□□□ 0.85
SMARCD1-202ENST00000394963 SLC4A10Q6U841 1118 aa20.33■□□□□ 0.85
SMARCD1-202ENST00000394963 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
SMARCD1-202ENST00000394963 RIMS2Q9UQ26 1411 aa20.33■□□□□ 0.84
SMARCD1-202ENST00000394963 EIF2AK4Q9P2K8 1649 aaKnown RBP20.33■□□□□ 0.84
SMARCD1-202ENST00000394963 TMPOP42166 694 aaKnown RBP20.33■□□□□ 0.84
SMARCD1-202ENST00000394963 ESCO1Q5FWF5 840 aa20.33■□□□□ 0.84
SMARCD1-202ENST00000394963 ABTB2Q8N961 1025 aa20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 HAP1P54257 671 aaPredicted RBP20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 THEMISQ8N1K5 641 aaPredicted RBP20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 NEO1Q92859 1461 aa20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 PNNQ9H307 717 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 TRPM1Q7Z4N2 1603 aa20.32■□□□□ 0.84
SMARCD1-202ENST00000394963 ARXQ96QS3 562 aa20.31■□□□□ 0.84
SMARCD1-202ENST00000394963 ERVK-7P63135 1459 aa20.31■□□□□ 0.84
SMARCD1-202ENST00000394963 NOP58Q9Y2X3 529 aaKnown RBP20.31■□□□□ 0.84
SMARCD1-202ENST00000394963 ATAD2Q6PL18 1390 aa20.31■□□□□ 0.84
SMARCD1-202ENST00000394963 C1orf115Q9H7X2 142 aa20.3■□□□□ 0.84
SMARCD1-202ENST00000394963 TNRQ92752 1358 aa20.3■□□□□ 0.84
SMARCD1-202ENST00000394963 PSME1Q06323 249 aa20.3■□□□□ 0.84
SMARCD1-202ENST00000394963 YTHDC2Q9H6S0 1430 aaKnown RBP20.29■□□□□ 0.84
SMARCD1-202ENST00000394963 CEP152O94986 1710 aa20.28■□□□□ 0.84
SMARCD1-202ENST00000394963 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
SMARCD1-202ENST00000394963 ZKSCAN2Q63HK3 967 aa20.27■□□□□ 0.84
SMARCD1-202ENST00000394963 USHBP1Q8N6Y0 703 aa20.27■□□□□ 0.84
SMARCD1-202ENST00000394963 KIDINS220Q9ULH0 1771 aa20.27■□□□□ 0.84
SMARCD1-202ENST00000394963 HSP90AB2PQ58FF8 381 aa20.27■□□□□ 0.84
SMARCD1-202ENST00000394963 MCM10Q7L590 875 aa20.27■□□□□ 0.84
SMARCD1-202ENST00000394963 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
SMARCD1-202ENST00000394963 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
SMARCD1-202ENST00000394963 ACEP12821 1306 aa20.26■□□□□ 0.83
SMARCD1-202ENST00000394963 EFCAB6Q5THR3 1501 aa20.26■□□□□ 0.83
SMARCD1-202ENST00000394963 ABCC3O15438 1527 aa20.26■□□□□ 0.83
SMARCD1-202ENST00000394963 MSH5O43196 834 aa20.26■□□□□ 0.83
SMARCD1-202ENST00000394963 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
SMARCD1-202ENST00000394963 METP08581 1390 aa20.25■□□□□ 0.83
SMARCD1-202ENST00000394963 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
SMARCD1-202ENST00000394963 DZIP1LQ8IYY4 767 aaKnown RBP20.25■□□□□ 0.83
SMARCD1-202ENST00000394963 NOB1Q9ULX3 412 aaKnown RBP20.25■□□□□ 0.83
SMARCD1-202ENST00000394963 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
SMARCD1-202ENST00000394963 FOXO3O43524 673 aa20.24■□□□□ 0.83
SMARCD1-202ENST00000394963 TET3O43151 1660 aa20.24■□□□□ 0.83
SMARCD1-202ENST00000394963 MYT1Q01538 1121 aa20.23■□□□□ 0.83
SMARCD1-202ENST00000394963 SPHKAPQ2M3C7 1700 aa20.23■□□□□ 0.83
SMARCD1-202ENST00000394963 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
SMARCD1-202ENST00000394963 RNF17Q9BXT8 1623 aaKnown RBP20.22■□□□□ 0.83
SMARCD1-202ENST00000394963 KCNA6P17658 529 aa20.22■□□□□ 0.83
SMARCD1-202ENST00000394963 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
SMARCD1-202ENST00000394963 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
SMARCD1-202ENST00000394963 PIK3C2GO75747 1445 aa20.22■□□□□ 0.83
SMARCD1-202ENST00000394963 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
SMARCD1-202ENST00000394963 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms