RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
COL4A6-203ENST00000394872 DCAF8L1A6NGE4 600 aa12.63□□□□□ -0.39
COL4A6-203ENST00000394872 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
COL4A6-203ENST00000394872 CCDC70Q6NSX1 233 aa12.62□□□□□ -0.39
COL4A6-203ENST00000394872 BICD2Q8TD16 824 aa12.62□□□□□ -0.39
COL4A6-203ENST00000394872 FAM177BA6PVY3 158 aa12.62□□□□□ -0.39
COL4A6-203ENST00000394872 INTS3Q68E01 1043 aaKnown RBP12.61□□□□□ -0.39
COL4A6-203ENST00000394872 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL4A6-203ENST00000394872 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-203ENST00000394872 RALYLQ86SE5 291 aaKnown RBP12.61□□□□□ -0.39
COL4A6-203ENST00000394872 SAFBQ15424 915 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL4A6-203ENST00000394872 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
COL4A6-203ENST00000394872 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
COL4A6-203ENST00000394872 IPO7O95373 1038 aaKnown RBP12.6□□□□□ -0.39
COL4A6-203ENST00000394872 PROSER2Q86WR7 435 aaPredicted RBP12.6□□□□□ -0.39
COL4A6-203ENST00000394872 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
COL4A6-203ENST00000394872 TXNDC2Q86VQ3 553 aa12.6□□□□□ -0.39
COL4A6-203ENST00000394872 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
COL4A6-203ENST00000394872 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
COL4A6-203ENST00000394872 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
COL4A6-203ENST00000394872 SMC3Q9UQE7 1217 aa12.6□□□□□ -0.39
COL4A6-203ENST00000394872 MTMR7Q9Y216 660 aa12.6□□□□□ -0.39
COL4A6-203ENST00000394872 FGD6Q6ZV73 1430 aa12.59□□□□□ -0.39
COL4A6-203ENST00000394872 IGF1RP08069 1367 aa12.58□□□□□ -0.4
COL4A6-203ENST00000394872 IKQ13123 557 aaPredicted RBP12.58□□□□□ -0.4
COL4A6-203ENST00000394872 LNPKQ9C0E8 428 aa12.58□□□□□ -0.4
COL4A6-203ENST00000394872 SMG6Q86US8 1419 aaKnown RBP12.58□□□□□ -0.4
COL4A6-203ENST00000394872 PLEKHO1Q53GL0 409 aaPredicted RBP12.58□□□□□ -0.4
COL4A6-203ENST00000394872 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
COL4A6-203ENST00000394872 ANKRD50Q9ULJ7 1429 aa12.57□□□□□ -0.4
COL4A6-203ENST00000394872 ZNF592Q92610 1267 aa12.57□□□□□ -0.4
COL4A6-203ENST00000394872 BRMS1Q9HCU9 246 aa12.57□□□□□ -0.4
COL4A6-203ENST00000394872 RRBP1Q9P2E9 1410 aaKnown RBP12.57□□□□□ -0.4
COL4A6-203ENST00000394872 GAS2L2Q8NHY3 880 aa12.57□□□□□ -0.4
COL4A6-203ENST00000394872 CCDC30Q5VVM6 783 aa12.57□□□□□ -0.4
COL4A6-203ENST00000394872 FYCO1Q9BQS8 1478 aa12.57□□□□□ -0.4
COL4A6-203ENST00000394872 PPP1R1BQ9UD71 204 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-203ENST00000394872 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
COL4A6-203ENST00000394872 AFAP1Q8N556 730 aa12.55□□□□□ -0.4
COL4A6-203ENST00000394872 NUTM2BA6NNL0 878 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-203ENST00000394872 NUTM2EB1AL46 878 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-203ENST00000394872 KDM4AO75164 1064 aa12.55□□□□□ -0.4
COL4A6-203ENST00000394872 SF3B2Q13435 895 aaKnown RBP12.55□□□□□ -0.4
COL4A6-203ENST00000394872 NUTM2AQ8IVF1 878 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-203ENST00000394872 CNTROBQ8N137 903 aa12.55□□□□□ -0.4
COL4A6-203ENST00000394872 SASS6Q6UVJ0 657 aa12.55□□□□□ -0.4
COL4A6-203ENST00000394872 FSD1Q9BTV5 496 aa12.55□□□□□ -0.4
COL4A6-203ENST00000394872 MTHFSP49914 203 aa12.55□□□□□ -0.4
COL4A6-203ENST00000394872 GPS2Q13227 327 aa12.55□□□□□ -0.4
COL4A6-203ENST00000394872 XBP1P17861 261 aa12.54□□□□□ -0.4
COL4A6-203ENST00000394872 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
COL4A6-203ENST00000394872 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
COL4A6-203ENST00000394872 R3HCC1Q9Y3T6 440 aaKnown RBP12.54□□□□□ -0.4
COL4A6-203ENST00000394872 DNAJC2Q99543 621 aaKnown RBP12.54□□□□□ -0.4
COL4A6-203ENST00000394872 KIF7Q2M1P5 1343 aa12.54□□□□□ -0.4
COL4A6-203ENST00000394872 PANK1Q8TE04 598 aa12.54□□□□□ -0.4
COL4A6-203ENST00000394872 CCDC7Q96M83 1385 aa12.54□□□□□ -0.4
COL4A6-203ENST00000394872 PRAM1Q96QH2 718 aa12.54□□□□□ -0.4
COL4A6-203ENST00000394872 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
COL4A6-203ENST00000394872 SYNJ2O15056 1496 aa12.53□□□□□ -0.4
COL4A6-203ENST00000394872 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
COL4A6-203ENST00000394872 NAP1L1P55209 391 aaKnown RBP12.53□□□□□ -0.4
COL4A6-203ENST00000394872 CT47A1Q5JQC4 288 aaPredicted RBP12.53□□□□□ -0.4
COL4A6-203ENST00000394872 HOMER1Q86YM7 354 aa12.53□□□□□ -0.4
COL4A6-203ENST00000394872 SETQ01105 290 aaPredicted RBP12.52□□□□□ -0.4
COL4A6-203ENST00000394872 PSMA5P28066 241 aa12.52□□□□□ -0.4
COL4A6-203ENST00000394872 EPS15P42566 896 aa12.52□□□□□ -0.4
COL4A6-203ENST00000394872 SART3Q15020 963 aaKnown RBP12.52□□□□□ -0.4
COL4A6-203ENST00000394872 CNNM1Q9NRU3 951 aa12.52□□□□□ -0.41
COL4A6-203ENST00000394872 CNTLNQ9NXG0 1405 aa12.52□□□□□ -0.41
COL4A6-203ENST00000394872 THEMISQ8N1K5 641 aaPredicted RBP12.52□□□□□ -0.41
COL4A6-203ENST00000394872 CLASRPQ8N2M8 674 aaKnown RBP12.52□□□□□ -0.41
COL4A6-203ENST00000394872 CCAR1Q8IX12 1150 aaKnown RBP12.52□□□□□ -0.41
COL4A6-203ENST00000394872 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
COL4A6-203ENST00000394872 CDC45O75419 566 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 SURF6O75683 361 aaKnown RBP12.51□□□□□ -0.41
COL4A6-203ENST00000394872 CABP4P57796 275 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 GSE1Q14687 1217 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 GNAI3P08754 354 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 TTC39AQ5SRH9 613 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
COL4A6-203ENST00000394872 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
COL4A6-203ENST00000394872 ODF2Q5BJF6 829 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 PRKAR2BP31323 418 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 NUCB2P80303 420 aa12.51□□□□□ -0.41
COL4A6-203ENST00000394872 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
COL4A6-203ENST00000394872 LRRC9Q6ZRR7 1453 aa12.5□□□□□ -0.41
COL4A6-203ENST00000394872 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
COL4A6-203ENST00000394872 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
COL4A6-203ENST00000394872 C22orf23Q9BZE7 217 aa12.5□□□□□ -0.41
COL4A6-203ENST00000394872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL4A6-203ENST00000394872 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
COL4A6-203ENST00000394872 OLFM4Q6UX06 510 aa12.49□□□□□ -0.41
COL4A6-203ENST00000394872 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
COL4A6-203ENST00000394872 CDK19Q9BWU1 502 aa12.49□□□□□ -0.41
COL4A6-203ENST00000394872 ADAMTS8Q9UP79 889 aa12.49□□□□□ -0.41
COL4A6-203ENST00000394872 GNL3LQ9NVN8 582 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms