RNA–Protein interactions for RNA: ENST00000394689.2

BRD7-202, Transcript of bromodomain containing 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRD7, Length 2,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7-202ENST00000394689 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
BRD7-202ENST00000394689 WRNQ14191 1432 aaPredicted RBP eCLIP10.3□□□□□ -0.76
BRD7-202ENST00000394689 HS1BP3Q53T59 392 aa10.3□□□□□ -0.76
BRD7-202ENST00000394689 R3HCC1Q9Y3T6 440 aaKnown RBP10.3□□□□□ -0.76
BRD7-202ENST00000394689 PAXBP1Q9Y5B6 917 aa10.3□□□□□ -0.76
BRD7-202ENST00000394689 CCDC88BA6NC98 1476 aa10.3□□□□□ -0.76
BRD7-202ENST00000394689 ERCC3P19447 782 aa10.29□□□□□ -0.76
BRD7-202ENST00000394689 C1QTNF12Q5T7M4 302 aa10.29□□□□□ -0.76
BRD7-202ENST00000394689 PRDM2Q13029 1718 aa10.28□□□□□ -0.76
BRD7-202ENST00000394689 MSNP26038 577 aaKnown RBP10.28□□□□□ -0.76
BRD7-202ENST00000394689 FEZ1Q99689 392 aa10.28□□□□□ -0.76
BRD7-202ENST00000394689 MTA3Q9BTC8 594 aa10.28□□□□□ -0.76
BRD7-202ENST00000394689 SMARCA2P51531 1590 aa10.28□□□□□ -0.76
BRD7-202ENST00000394689 DHX16O60231 1041 aaKnown RBP10.27□□□□□ -0.77
BRD7-202ENST00000394689 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
BRD7-202ENST00000394689 CT47B1P0C2W7 299 aaPredicted RBP10.27□□□□□ -0.77
BRD7-202ENST00000394689 PANK2Q9BZ23 570 aa10.27□□□□□ -0.77
BRD7-202ENST00000394689 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
BRD7-202ENST00000394689 RPS6KL1Q9Y6S9 549 aa10.27□□□□□ -0.77
BRD7-202ENST00000394689 ABCC8Q09428 1581 aa10.27□□□□□ -0.77
BRD7-202ENST00000394689 SSFA2P28290 1259 aa10.27□□□□□ -0.77
BRD7-202ENST00000394689 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
BRD7-202ENST00000394689 ABCB7O75027 752 aa10.26□□□□□ -0.77
BRD7-202ENST00000394689 BRD1O95696 1058 aa10.26□□□□□ -0.77
BRD7-202ENST00000394689 CD151P48509 253 aa10.26□□□□□ -0.77
BRD7-202ENST00000394689 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
BRD7-202ENST00000394689 TPM3P06753 285 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 BECN1Q14457 450 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 C1orf115Q9H7X2 142 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 CEP126Q9P2H0 1117 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 SUFUQ9UMX1 484 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 TNIKQ9UKE5 1360 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 CCDC173Q0VFZ6 552 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 RPAINQ86UA6 219 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 ERCC4Q92889 916 aaPredicted RBP10.25□□□□□ -0.77
BRD7-202ENST00000394689 RBM42Q9BTD8 480 aaKnown RBP10.25□□□□□ -0.77
BRD7-202ENST00000394689 GRPEL1Q9HAV7 217 aa10.25□□□□□ -0.77
BRD7-202ENST00000394689 CEP162Q5TB80 1403 aa10.24□□□□□ -0.77
BRD7-202ENST00000394689 CCDC196A0A1B0GTZ2 297 aa10.24□□□□□ -0.77
BRD7-202ENST00000394689 BIRC2Q13490 618 aa10.24□□□□□ -0.77
BRD7-202ENST00000394689 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
BRD7-202ENST00000394689 NOL8Q76FK4 1167 aaKnown RBP10.24□□□□□ -0.77
BRD7-202ENST00000394689 PAX7P23759 505 aa10.24□□□□□ -0.77
BRD7-202ENST00000394689 ZNF280DQ6N043 979 aa10.24□□□□□ -0.77
BRD7-202ENST00000394689 CCDC91Q7Z6B0 441 aa10.24□□□□□ -0.77
BRD7-202ENST00000394689 RAD54L2Q9Y4B4 1467 aa10.23□□□□□ -0.77
BRD7-202ENST00000394689 ANKRD33BA6NCL7 494 aa10.23□□□□□ -0.77
BRD7-202ENST00000394689 MCM5P33992 734 aa10.23□□□□□ -0.77
BRD7-202ENST00000394689 GTF2F1P35269 517 aaKnown RBP eCLIP10.23□□□□□ -0.77
BRD7-202ENST00000394689 ATP2B3Q16720 1220 aa10.23□□□□□ -0.77
BRD7-202ENST00000394689 PPP1R9BQ96SB3 815 aa10.23□□□□□ -0.77
BRD7-202ENST00000394689 CXorf56Q9H5V9 222 aa10.23□□□□□ -0.77
BRD7-202ENST00000394689 RSPH14Q9UHP6 348 aa10.23□□□□□ -0.77
BRD7-202ENST00000394689 CDC37Q16543 378 aaPredicted RBP10.22□□□□□ -0.77
BRD7-202ENST00000394689 CXorf38Q8TB03 319 aa10.22□□□□□ -0.77
BRD7-202ENST00000394689 RASSF4Q9H2L5 321 aa10.22□□□□□ -0.77
BRD7-202ENST00000394689 ZRANB2O95218 330 aaKnown RBP eCLIP10.22□□□□□ -0.77
BRD7-202ENST00000394689 PROCA1Q8NCQ7 364 aaPredicted RBP10.22□□□□□ -0.77
BRD7-202ENST00000394689 TBC1D22AQ8WUA7 517 aa10.22□□□□□ -0.77
BRD7-202ENST00000394689 NOL10Q9BSC4 688 aaKnown RBP10.22□□□□□ -0.77
BRD7-202ENST00000394689 UPF2Q9HAU5 1272 aaKnown RBP10.22□□□□□ -0.77
BRD7-202ENST00000394689 OGFRQ9NZT2 677 aa10.22□□□□□ -0.77
BRD7-202ENST00000394689 SOGA1O94964 1423 aa10.22□□□□□ -0.77
BRD7-202ENST00000394689 H0YHG0 523 aa10.21□□□□□ -0.77
BRD7-202ENST00000394689 GSCP56915 257 aaPredicted RBP10.21□□□□□ -0.77
BRD7-202ENST00000394689 SARNPP82979 210 aaKnown RBP10.21□□□□□ -0.77
BRD7-202ENST00000394689 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.77
BRD7-202ENST00000394689 MYRIPQ8NFW9 859 aa10.21□□□□□ -0.77
BRD7-202ENST00000394689 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.77
BRD7-202ENST00000394689 SNRNP27Q8WVK2 155 aaKnown RBP10.21□□□□□ -0.77
BRD7-202ENST00000394689 TEX13AQ9BXU3 409 aaPredicted RBP10.21□□□□□ -0.77
BRD7-202ENST00000394689 SLFN14P0C7P3 912 aa10.21□□□□□ -0.78
BRD7-202ENST00000394689 CCT2P78371 535 aaKnown RBP10.21□□□□□ -0.78
BRD7-202ENST00000394689 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.78
BRD7-202ENST00000394689 HMGN5P82970 282 aaKnown RBP10.2□□□□□ -0.78
BRD7-202ENST00000394689 KRBA2Q6ZNG9 492 aa10.2□□□□□ -0.78
BRD7-202ENST00000394689 APBB1IPQ7Z5R6 666 aaPredicted RBP10.2□□□□□ -0.78
BRD7-202ENST00000394689 RANBP17Q9H2T7 1088 aaKnown RBP10.2□□□□□ -0.78
BRD7-202ENST00000394689 HSPA5P11021 654 aaKnown RBP10.19□□□□□ -0.78
BRD7-202ENST00000394689 ATL2Q8NHH9 583 aa10.19□□□□□ -0.78
BRD7-202ENST00000394689 PIK3R5Q8WYR1 880 aa10.19□□□□□ -0.78
BRD7-202ENST00000394689 PRIMPOLQ96LW4 560 aa10.19□□□□□ -0.78
BRD7-202ENST00000394689 FRMD4BQ9Y2L6 1034 aa10.19□□□□□ -0.78
BRD7-202ENST00000394689 RNF123Q5XPI4 1314 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 TPD52L2O43399 206 aaKnown RBP10.18□□□□□ -0.78
BRD7-202ENST00000394689 DNAJC21Q5F1R6 531 aaKnown RBP10.18□□□□□ -0.78
BRD7-202ENST00000394689 KLHL23Q8NBE8 558 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 PNISRQ8TF01 805 aaKnown RBP10.18□□□□□ -0.78
BRD7-202ENST00000394689 SYNPO2Q9UMS6 1093 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 ANKRD18BA2A2Z9 1011 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 TESPA1A2RU30 521 aaPredicted RBP10.18□□□□□ -0.78
BRD7-202ENST00000394689 GOLGA6L6A8MZA4 724 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 GOLGA6L22H0YM25 854 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 ABCD1P33897 745 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
BRD7-202ENST00000394689 FAM184AQ8NB25 1140 aa10.18□□□□□ -0.78
BRD7-202ENST00000394689 ZCRB1Q8TBF4 217 aaKnown RBP10.18□□□□□ -0.78
BRD7-202ENST00000394689 LARP6Q9BRS8 491 aaKnown RBP10.18□□□□□ -0.78
BRD7-202ENST00000394689 SETSIPP0DME0 302 aa10.17□□□□□ -0.78
BRD7-202ENST00000394689 SF3A1Q15459 793 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms