RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 IQGAP3Q86VI3 1631 aa13.43□□□□□ -0.26
ACTN1-203ENST00000394419 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
ACTN1-203ENST00000394419 UNC13BO14795 1591 aa13.43□□□□□ -0.26
ACTN1-203ENST00000394419 ZKSCAN2Q63HK3 967 aa13.43□□□□□ -0.26
ACTN1-203ENST00000394419 PIK3C2GO75747 1445 aa13.42□□□□□ -0.26
ACTN1-203ENST00000394419 SOX12O15370 315 aa13.42□□□□□ -0.26
ACTN1-203ENST00000394419 RIPK4P57078 832 aa13.42□□□□□ -0.26
ACTN1-203ENST00000394419 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
ACTN1-203ENST00000394419 PCDHB15Q9Y5E8 787 aa13.42□□□□□ -0.26
ACTN1-203ENST00000394419 PRAM1Q96QH2 718 aa13.42□□□□□ -0.26
ACTN1-203ENST00000394419 C14orf93Q9H972 538 aaKnown RBP13.42□□□□□ -0.26
ACTN1-203ENST00000394419 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
ACTN1-203ENST00000394419 IDI1Q13907 227 aa13.41□□□□□ -0.26
ACTN1-203ENST00000394419 TERF2IPQ9NYB0 399 aa13.41□□□□□ -0.26
ACTN1-203ENST00000394419 HMOX1P09601 288 aa13.4□□□□□ -0.26
ACTN1-203ENST00000394419 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-203ENST00000394419 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
ACTN1-203ENST00000394419 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-203ENST00000394419 ABCC1P33527 1531 aa13.4□□□□□ -0.26
ACTN1-203ENST00000394419 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
ACTN1-203ENST00000394419 HSP90AA1P07900 732 aaKnown RBP13.4□□□□□ -0.26
ACTN1-203ENST00000394419 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-203ENST00000394419 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
ACTN1-203ENST00000394419 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
ACTN1-203ENST00000394419 EIF5BO60841 1220 aaKnown RBP13.39□□□□□ -0.27
ACTN1-203ENST00000394419 E9PCH4 1651 aa13.39□□□□□ -0.27
ACTN1-203ENST00000394419 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
ACTN1-203ENST00000394419 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
ACTN1-203ENST00000394419 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
ACTN1-203ENST00000394419 PLXNC1O60486 1568 aa13.38□□□□□ -0.27
ACTN1-203ENST00000394419 ATP7AQ04656 1500 aa13.38□□□□□ -0.27
ACTN1-203ENST00000394419 ERVK-7P63135 1459 aa13.38□□□□□ -0.27
ACTN1-203ENST00000394419 CYB5RLQ6IPT4 315 aa13.38□□□□□ -0.27
ACTN1-203ENST00000394419 TRMT2AQ8IZ69 625 aaKnown RBP13.38□□□□□ -0.27
ACTN1-203ENST00000394419 WDR63Q8IWG1 891 aa13.37□□□□□ -0.27
ACTN1-203ENST00000394419 CABP1Q9NZU7 370 aa13.37□□□□□ -0.27
ACTN1-203ENST00000394419 CD109Q6YHK3 1445 aa13.37□□□□□ -0.27
ACTN1-203ENST00000394419 DIAPH1O60610 1272 aaKnown RBP13.37□□□□□ -0.27
ACTN1-203ENST00000394419 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-203ENST00000394419 CLTCL1P53675 1640 aa13.37□□□□□ -0.27
ACTN1-203ENST00000394419 NOB1Q9ULX3 412 aaKnown RBP13.36□□□□□ -0.27
ACTN1-203ENST00000394419 PTPRTO14522 1441 aa13.36□□□□□ -0.27
ACTN1-203ENST00000394419 TRPM2O94759 1503 aa13.36□□□□□ -0.27
ACTN1-203ENST00000394419 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
ACTN1-203ENST00000394419 INSRP06213 1382 aa13.36□□□□□ -0.27
ACTN1-203ENST00000394419 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
ACTN1-203ENST00000394419 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
ACTN1-203ENST00000394419 SSH1Q8WYL5 1049 aa13.35□□□□□ -0.27
ACTN1-203ENST00000394419 POLR3AO14802 1390 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-203ENST00000394419 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
ACTN1-203ENST00000394419 NPC1L1Q9UHC9 1359 aa13.35□□□□□ -0.27
ACTN1-203ENST00000394419 APBB1O00213 710 aa13.34□□□□□ -0.27
ACTN1-203ENST00000394419 MADDQ8WXG6 1647 aa13.34□□□□□ -0.27
ACTN1-203ENST00000394419 WAPLQ7Z5K2 1190 aa13.34□□□□□ -0.27
ACTN1-203ENST00000394419 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.27
ACTN1-203ENST00000394419 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.27
ACTN1-203ENST00000394419 FOXD4L1Q9NU39 408 aa13.33□□□□□ -0.27
ACTN1-203ENST00000394419 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
ACTN1-203ENST00000394419 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
ACTN1-203ENST00000394419 CDK19Q9BWU1 502 aa13.33□□□□□ -0.28
ACTN1-203ENST00000394419 SYNMO15061 1565 aa13.32□□□□□ -0.28
ACTN1-203ENST00000394419 TRIM27P14373 513 aa13.32□□□□□ -0.28
ACTN1-203ENST00000394419 TMEM57Q8N5G2 664 aa13.32□□□□□ -0.28
ACTN1-203ENST00000394419 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
ACTN1-203ENST00000394419 ANKRD45Q5TZF3 282 aa13.31□□□□□ -0.28
ACTN1-203ENST00000394419 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
ACTN1-203ENST00000394419 RPGRIP1LQ68CZ1 1315 aa13.31□□□□□ -0.28
ACTN1-203ENST00000394419 KDM5AP29375 1690 aaKnown RBP13.31□□□□□ -0.28
ACTN1-203ENST00000394419 FYB1O15117 783 aa13.3□□□□□ -0.28
ACTN1-203ENST00000394419 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
ACTN1-203ENST00000394419 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
ACTN1-203ENST00000394419 NPATQ14207 1427 aa13.3□□□□□ -0.28
ACTN1-203ENST00000394419 C22orf23Q9BZE7 217 aa13.3□□□□□ -0.28
ACTN1-203ENST00000394419 HSCBQ8IWL3 235 aa13.29□□□□□ -0.28
ACTN1-203ENST00000394419 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
ACTN1-203ENST00000394419 ZNF518AQ6AHZ1 1483 aa13.28□□□□□ -0.28
ACTN1-203ENST00000394419 LAMC1P11047 1609 aa13.28□□□□□ -0.28
ACTN1-203ENST00000394419 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.28
ACTN1-203ENST00000394419 SLC52A1Q9NWF4 448 aa13.27□□□□□ -0.28
ACTN1-203ENST00000394419 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
ACTN1-203ENST00000394419 TBC1D2Q9BYX2 928 aa13.27□□□□□ -0.29
ACTN1-203ENST00000394419 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
ACTN1-203ENST00000394419 FAM69CQ0P6D2 419 aa13.26□□□□□ -0.29
ACTN1-203ENST00000394419 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
ACTN1-203ENST00000394419 TXNDC2Q86VQ3 553 aa13.26□□□□□ -0.29
ACTN1-203ENST00000394419 ANKRD36BQ8N2N9 1353 aa13.26□□□□□ -0.29
ACTN1-203ENST00000394419 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
ACTN1-203ENST00000394419 EMILIN1Q9Y6C2 1016 aa13.26□□□□□ -0.29
ACTN1-203ENST00000394419 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
ACTN1-203ENST00000394419 TET3O43151 1660 aa13.25□□□□□ -0.29
ACTN1-203ENST00000394419 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
ACTN1-203ENST00000394419 TRIM35Q9UPQ4 493 aa13.25□□□□□ -0.29
ACTN1-203ENST00000394419 MAP3K4Q9Y6R4 1608 aa13.24□□□□□ -0.29
ACTN1-203ENST00000394419 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
ACTN1-203ENST00000394419 SHROOM2Q13796 1616 aa13.23□□□□□ -0.29
ACTN1-203ENST00000394419 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
ACTN1-203ENST00000394419 ABCA6Q8N139 1617 aa13.23□□□□□ -0.29
ACTN1-203ENST00000394419 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
ACTN1-203ENST00000394419 NME9Q86XW9 330 aa13.23□□□□□ -0.29
ACTN1-203ENST00000394419 NCKAP5LQ9HCH0 1330 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms