RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 PCMTD1Q96MG8 357 aaPredicted RBP10.8□□□□□ -0.68
CHD2-201ENST00000394196 CCDC112Q8NEF3 446 aa10.8□□□□□ -0.68
CHD2-201ENST00000394196 GORABQ5T7V8 394 aa10.8□□□□□ -0.68
CHD2-201ENST00000394196 KLHL10Q6JEL2 608 aa10.8□□□□□ -0.68
CHD2-201ENST00000394196 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
CHD2-201ENST00000394196 CCAR1Q8IX12 1150 aaKnown RBP10.79□□□□□ -0.68
CHD2-201ENST00000394196 LRCH2Q5VUJ6 765 aa10.79□□□□□ -0.68
CHD2-201ENST00000394196 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
CHD2-201ENST00000394196 CENPHQ9H3R5 247 aa10.79□□□□□ -0.68
CHD2-201ENST00000394196 MAP9Q49MG5 647 aa10.79□□□□□ -0.68
CHD2-201ENST00000394196 CCDC73Q6ZRK6 1079 aa10.79□□□□□ -0.68
CHD2-201ENST00000394196 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
CHD2-201ENST00000394196 KANK1Q14678 1352 aa10.79□□□□□ -0.68
CHD2-201ENST00000394196 DDX46Q7L014 1031 aaKnown RBP10.78□□□□□ -0.68
CHD2-201ENST00000394196 RSRC1Q96IZ7 334 aaKnown RBP10.78□□□□□ -0.68
CHD2-201ENST00000394196 ZFYP08048 801 aaPredicted RBP10.78□□□□□ -0.68
CHD2-201ENST00000394196 KIF15Q9NS87 1388 aa10.78□□□□□ -0.68
CHD2-201ENST00000394196 PIP4K2AP48426 406 aaPredicted RBP10.78□□□□□ -0.68
CHD2-201ENST00000394196 LIMCH1Q9UPQ0 1083 aa10.78□□□□□ -0.68
CHD2-201ENST00000394196 MARCH6O60337 910 aa10.78□□□□□ -0.68
CHD2-201ENST00000394196 BICD2Q8TD16 824 aa10.78□□□□□ -0.68
CHD2-201ENST00000394196 LRRCC1Q9C099 1032 aa10.78□□□□□ -0.68
CHD2-201ENST00000394196 SMAP1Q8IYB5 467 aaPredicted RBP10.77□□□□□ -0.68
CHD2-201ENST00000394196 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.77□□□□□ -0.68
CHD2-201ENST00000394196 TNNT1P13805 278 aa10.77□□□□□ -0.68
CHD2-201ENST00000394196 AP1ARQ63HQ0 302 aa10.77□□□□□ -0.68
CHD2-201ENST00000394196 TICAM2Q86XR7 235 aa10.77□□□□□ -0.68
CHD2-201ENST00000394196 USH1CQ9Y6N9 552 aa10.77□□□□□ -0.68
CHD2-201ENST00000394196 TRAK2O60296 914 aa10.77□□□□□ -0.69
CHD2-201ENST00000394196 ODF2Q5BJF6 829 aa10.77□□□□□ -0.69
CHD2-201ENST00000394196 CEP63Q96MT8 703 aa10.77□□□□□ -0.69
CHD2-201ENST00000394196 MAP3K7CLP57077 242 aa10.77□□□□□ -0.69
CHD2-201ENST00000394196 MCM5P33992 734 aa10.76□□□□□ -0.69
CHD2-201ENST00000394196 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
CHD2-201ENST00000394196 RRP1P56182 461 aaKnown RBP10.76□□□□□ -0.69
CHD2-201ENST00000394196 SATB2Q9UPW6 733 aa10.76□□□□□ -0.69
CHD2-201ENST00000394196 PDCP20941 246 aa10.76□□□□□ -0.69
CHD2-201ENST00000394196 RBBP5Q15291 538 aaKnown RBP10.76□□□□□ -0.69
CHD2-201ENST00000394196 UIMC1Q96RL1 719 aa10.76□□□□□ -0.69
CHD2-201ENST00000394196 E9PSI1 815 aa10.75□□□□□ -0.69
CHD2-201ENST00000394196 FILIP1LQ4L180 1135 aa10.75□□□□□ -0.69
CHD2-201ENST00000394196 INTS3Q68E01 1043 aaKnown RBP10.75□□□□□ -0.69
CHD2-201ENST00000394196 HDGFL2Q7Z4V5 671 aaPredicted RBP10.75□□□□□ -0.69
CHD2-201ENST00000394196 CFDP1Q9UEE9 299 aaPredicted RBP10.75□□□□□ -0.69
CHD2-201ENST00000394196 DBN1Q16643 649 aa10.75□□□□□ -0.69
CHD2-201ENST00000394196 TSPY26PQ9H489 355 aa10.75□□□□□ -0.69
CHD2-201ENST00000394196 ERICH4A6NGS2 130 aa10.75□□□□□ -0.69
CHD2-201ENST00000394196 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
CHD2-201ENST00000394196 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 TTC31Q49AM3 519 aaPredicted RBP10.74□□□□□ -0.69
CHD2-201ENST00000394196 CEP83Q9Y592 693 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 CCDC6Q16204 474 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 GBP6Q6ZN66 633 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 SMC3Q9UQE7 1217 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 ESPNB1AK53 854 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 DDX19BQ9UMR2 479 aa10.74□□□□□ -0.69
CHD2-201ENST00000394196 APBB1O00213 710 aa10.73□□□□□ -0.69
CHD2-201ENST00000394196 CWC22Q9HCG8 908 aaKnown RBP10.73□□□□□ -0.69
CHD2-201ENST00000394196 CCDC50Q8IVM0 306 aa10.73□□□□□ -0.69
CHD2-201ENST00000394196 RASSF4Q9H2L5 321 aa10.73□□□□□ -0.69
CHD2-201ENST00000394196 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
CHD2-201ENST00000394196 PLEKHG5O94827 1062 aa10.73□□□□□ -0.69
CHD2-201ENST00000394196 SEPT7Q16181 437 aaKnown RBP10.73□□□□□ -0.69
CHD2-201ENST00000394196 BCL11BQ9C0K0 894 aaPredicted RBP10.73□□□□□ -0.69
CHD2-201ENST00000394196 STAMBPO95630 424 aa10.73□□□□□ -0.69
CHD2-201ENST00000394196 RBM26Q5T8P6 1007 aaKnown RBP10.73□□□□□ -0.69
CHD2-201ENST00000394196 TERF2IPQ9NYB0 399 aa10.73□□□□□ -0.69
CHD2-201ENST00000394196 PPP1R1BQ9UD71 204 aaPredicted RBP10.73□□□□□ -0.69
CHD2-201ENST00000394196 CCDC97Q96F63 343 aaPredicted RBP10.73□□□□□ -0.69
CHD2-201ENST00000394196 CDK5RAP3Q96JB5 506 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 MYBBP1AQ9BQG0 1328 aaKnown RBP10.72□□□□□ -0.69
CHD2-201ENST00000394196 SAFBQ15424 915 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHD2-201ENST00000394196 TMCO3Q6UWJ1 677 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 TRIM5Q9C035 493 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 RNF8O76064 485 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 NUP133Q8WUM0 1156 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 MYO15BQ96JP2 1530 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 FMNL2Q96PY5 1086 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
CHD2-201ENST00000394196 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.692e-7■□□□□ 10.6
CHD2-201ENST00000394196 KIF27Q86VH2 1401 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 ARHGAP35Q9NRY4 1499 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 HSP90AB2PQ58FF8 381 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 ZKSCAN2Q63HK3 967 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 ZSCAN30Q86W11 494 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 RNF214Q8ND24 703 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 DCAF11Q8TEB1 546 aa10.72□□□□□ -0.69
CHD2-201ENST00000394196 SPECC1LQ69YQ0 1117 aa10.71□□□□□ -0.69
CHD2-201ENST00000394196 SIN3AQ96ST3 1273 aa10.71□□□□□ -0.69
CHD2-201ENST00000394196 C6orf163Q5TEZ5 329 aa10.71□□□□□ -0.69
CHD2-201ENST00000394196 PDCD7Q8N8D1 485 aaKnown RBP10.71□□□□□ -0.69
CHD2-201ENST00000394196 A0A1B0GUL7 405 aa10.71□□□□□ -0.7
CHD2-201ENST00000394196 OFD1O75665 1012 aa10.71□□□□□ -0.7
CHD2-201ENST00000394196 EPS15P42566 896 aa10.71□□□□□ -0.7
CHD2-201ENST00000394196 ANKRD45Q5TZF3 282 aa10.71□□□□□ -0.7
CHD2-201ENST00000394196 C10orf67Q8IYJ2 551 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 DACH1Q9UI36 760 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 CCDC192P0DO97 292 aa10.7□□□□□ -0.7
CHD2-201ENST00000394196 HSPA4P34932 840 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms