RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 MTHFSP49914 203 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 PDE3AQ14432 1141 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 NGEFQ8N5V2 710 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 KIDINS220Q9ULH0 1771 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 NRXN1Q9ULB1 1477 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 C14orf93Q9H972 538 aaKnown RBP17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 SBNO2Q9Y2G9 1366 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 IL27Q8NEV9 243 aa17.99■□□□□ 0.47
GAPVD1-205ENST00000394084 SAFB2Q14151 953 aaKnown RBP eCLIP17.97■□□□□ 0.47
GAPVD1-205ENST00000394084 NPATQ14207 1427 aa17.97■□□□□ 0.47
GAPVD1-205ENST00000394084 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
GAPVD1-205ENST00000394084 RARSP54136 660 aaKnown RBP17.96■□□□□ 0.47
GAPVD1-205ENST00000394084 MYO3AQ8NEV4 1616 aa17.96■□□□□ 0.47
GAPVD1-205ENST00000394084 RTN4Q9NQC3 1192 aaKnown RBP17.95■□□□□ 0.46
GAPVD1-205ENST00000394084 RLBP1P12271 317 aa17.95■□□□□ 0.46
GAPVD1-205ENST00000394084 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
GAPVD1-205ENST00000394084 ZNF518AQ6AHZ1 1483 aa17.94■□□□□ 0.46
GAPVD1-205ENST00000394084 SEC24BO95487 1268 aa17.94■□□□□ 0.46
GAPVD1-205ENST00000394084 CFAP53Q96M91 514 aa17.94■□□□□ 0.46
GAPVD1-205ENST00000394084 QRICH2Q9H0J4 1663 aa17.94■□□□□ 0.46
GAPVD1-205ENST00000394084 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
GAPVD1-205ENST00000394084 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
GAPVD1-205ENST00000394084 CABP2Q9NPB3 220 aa17.93■□□□□ 0.46
GAPVD1-205ENST00000394084 LMTK2Q8IWU2 1503 aa17.92■□□□□ 0.46
GAPVD1-205ENST00000394084 SETBP1Q9Y6X0 1596 aa17.92■□□□□ 0.46
GAPVD1-205ENST00000394084 PCDHB15Q9Y5E8 787 aa17.92■□□□□ 0.46
GAPVD1-205ENST00000394084 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
GAPVD1-205ENST00000394084 NPM1P06748 294 aaKnown RBP eCLIP17.91■□□□□ 0.46
GAPVD1-205ENST00000394084 GSE1Q14687 1217 aa17.91■□□□□ 0.46
GAPVD1-205ENST00000394084 FRAT2O75474 233 aaPredicted RBP17.91■□□□□ 0.46
GAPVD1-205ENST00000394084 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
GAPVD1-205ENST00000394084 USP19O94966 1318 aa17.9■□□□□ 0.46
GAPVD1-205ENST00000394084 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
GAPVD1-205ENST00000394084 PPLO60437 1756 aa17.9■□□□□ 0.46
GAPVD1-205ENST00000394084 WDR63Q8IWG1 891 aa17.89■□□□□ 0.46
GAPVD1-205ENST00000394084 STK26Q9P289 416 aa17.89■□□□□ 0.46
GAPVD1-205ENST00000394084 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
GAPVD1-205ENST00000394084 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
GAPVD1-205ENST00000394084 EVC2Q86UK5 1308 aa17.89■□□□□ 0.45
GAPVD1-205ENST00000394084 ZC3H13Q5T200 1668 aaKnown RBP17.88■□□□□ 0.45
GAPVD1-205ENST00000394084 PMFBP1Q8TBY8 1022 aa17.87■□□□□ 0.45
GAPVD1-205ENST00000394084 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
GAPVD1-205ENST00000394084 FRMPD1Q5SYB0 1578 aa17.87■□□□□ 0.45
GAPVD1-205ENST00000394084 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
GAPVD1-205ENST00000394084 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
GAPVD1-205ENST00000394084 RPGRIP1LQ68CZ1 1315 aa17.86■□□□□ 0.45
GAPVD1-205ENST00000394084 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
GAPVD1-205ENST00000394084 PDZRN3Q9UPQ7 1066 aa17.86■□□□□ 0.45
GAPVD1-205ENST00000394084 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
GAPVD1-205ENST00000394084 MYH16Q9H6N6 1097 aa17.85■□□□□ 0.45
GAPVD1-205ENST00000394084 GGNBP2Q9H3C7 697 aa17.85■□□□□ 0.45
GAPVD1-205ENST00000394084 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
GAPVD1-205ENST00000394084 BRPF3Q9ULD4 1205 aa17.85■□□□□ 0.45
GAPVD1-205ENST00000394084 VGFO15240 615 aaPredicted RBP17.84■□□□□ 0.45
GAPVD1-205ENST00000394084 ANKRD36BQ8N2N9 1353 aa17.84■□□□□ 0.45
GAPVD1-205ENST00000394084 TULP4Q9NRJ4 1543 aa17.84■□□□□ 0.45
GAPVD1-205ENST00000394084 GLI2P10070 1586 aa17.84■□□□□ 0.45
GAPVD1-205ENST00000394084 CCDC27Q2M243 656 aa17.83■□□□□ 0.45
GAPVD1-205ENST00000394084 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.44
GAPVD1-205ENST00000394084 ABCC3O15438 1527 aa17.83■□□□□ 0.44
GAPVD1-205ENST00000394084 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
GAPVD1-205ENST00000394084 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
GAPVD1-205ENST00000394084 RWDD1Q9H446 243 aaPredicted RBP17.81■□□□□ 0.44
GAPVD1-205ENST00000394084 MLH3Q9UHC1 1453 aa17.81■□□□□ 0.44
GAPVD1-205ENST00000394084 VIRMAQ69YN4 1812 aaKnown RBP17.81■□□□□ 0.44
GAPVD1-205ENST00000394084 EXOSC9Q06265 439 aaKnown RBP17.81■□□□□ 0.44
GAPVD1-205ENST00000394084 IDI1Q13907 227 aa17.81■□□□□ 0.44
GAPVD1-205ENST00000394084 HECW2Q9P2P5 1572 aa17.8■□□□□ 0.44
GAPVD1-205ENST00000394084 MVPQ14764 893 aaKnown RBP17.8■□□□□ 0.44
GAPVD1-205ENST00000394084 ZKSCAN2Q63HK3 967 aa17.8■□□□□ 0.44
GAPVD1-205ENST00000394084 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
GAPVD1-205ENST00000394084 MINK1Q8N4C8 1332 aaPredicted RBP17.8■□□□□ 0.44
GAPVD1-205ENST00000394084 A0A1W2PP64 1363 aa17.8■□□□□ 0.44
GAPVD1-205ENST00000394084 BECN1Q14457 450 aa17.79■□□□□ 0.44
GAPVD1-205ENST00000394084 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
GAPVD1-205ENST00000394084 USP32Q8NFA0 1604 aa17.79■□□□□ 0.44
GAPVD1-205ENST00000394084 SIGLEC1Q9BZZ2 1709 aa17.79■□□□□ 0.44
GAPVD1-205ENST00000394084 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
GAPVD1-205ENST00000394084 ARHGEF28Q8N1W1 1705 aaKnown RBP17.78■□□□□ 0.44
GAPVD1-205ENST00000394084 NSD2O96028 1365 aa17.78■□□□□ 0.44
GAPVD1-205ENST00000394084 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
GAPVD1-205ENST00000394084 AAMPQ13685 434 aa17.77■□□□□ 0.44
GAPVD1-205ENST00000394084 CAMSAP1Q5T5Y3 1602 aa17.77■□□□□ 0.43
GAPVD1-205ENST00000394084 NLRP1Q9C000 1473 aa17.77■□□□□ 0.43
GAPVD1-205ENST00000394084 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
GAPVD1-205ENST00000394084 ITPRIPQ8IWB1 547 aa17.76■□□□□ 0.43
GAPVD1-205ENST00000394084 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
GAPVD1-205ENST00000394084 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
GAPVD1-205ENST00000394084 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
GAPVD1-205ENST00000394084 PLEKHF1Q96S99 279 aa17.75■□□□□ 0.43
GAPVD1-205ENST00000394084 POGKQ9P215 609 aa17.75■□□□□ 0.43
GAPVD1-205ENST00000394084 TRIM27P14373 513 aa17.75■□□□□ 0.43
GAPVD1-205ENST00000394084 PRAM1Q96QH2 718 aa17.75■□□□□ 0.43
GAPVD1-205ENST00000394084 SPRYD3Q8NCJ5 442 aa17.74■□□□□ 0.43
GAPVD1-205ENST00000394084 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
GAPVD1-205ENST00000394084 FYB1O15117 783 aa17.73■□□□□ 0.43
GAPVD1-205ENST00000394084 TBC1D32Q96NH3 1257 aa17.73■□□□□ 0.43
GAPVD1-205ENST00000394084 RIPK4P57078 832 aa17.73■□□□□ 0.43
GAPVD1-205ENST00000394084 NOB1Q9ULX3 412 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms