RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 MAP2K5Q13163 448 aa8.63□□□□□ -1.03
NPM1-203ENST00000393820 AMHR2Q16671 573 aa8.63□□□□□ -1.03
NPM1-203ENST00000393820 CDCA7LQ96GN5 454 aa8.63□□□□□ -1.03
NPM1-203ENST00000393820 DDRGK1Q96HY6 314 aa8.63□□□□□ -1.03
NPM1-203ENST00000393820 C3orf80F5H4A9 247 aa8.62□□□□□ -1.03
NPM1-203ENST00000393820 TJAP1Q5JTD0 557 aa8.62□□□□□ -1.03
NPM1-203ENST00000393820 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
NPM1-203ENST00000393820 PDZRN3Q9UPQ7 1066 aa8.62□□□□□ -1.03
NPM1-203ENST00000393820 WRNQ14191 1432 aaPredicted RBP eCLIP8.62□□□□□ -1.033e-7■■□□□ 13.1
NPM1-203ENST00000393820 PRSS12P56730 875 aa8.61□□□□□ -1.03
NPM1-203ENST00000393820 PPP4CP60510 307 aa8.61□□□□□ -1.03
NPM1-203ENST00000393820 TSKSQ9UJT2 592 aa8.61□□□□□ -1.03
NPM1-203ENST00000393820 IRF6O14896 467 aa8.6□□□□□ -1.03
NPM1-203ENST00000393820 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
NPM1-203ENST00000393820 ABCA5Q8WWZ7 1642 aa8.59□□□□□ -1.03
NPM1-203ENST00000393820 PBRM1Q86U86 1689 aa8.59□□□□□ -1.03
NPM1-203ENST00000393820 CERKQ8TCT0 537 aa8.59□□□□□ -1.03
NPM1-203ENST00000393820 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
NPM1-203ENST00000393820 SMAPO00193 183 aa8.58□□□□□ -1.04
NPM1-203ENST00000393820 IL21Q9HBE4 155 aa8.58□□□□□ -1.04
NPM1-203ENST00000393820 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.58□□□□□ -1.04
NPM1-203ENST00000393820 TTC13Q8NBP0 860 aa8.57□□□□□ -1.04
NPM1-203ENST00000393820 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
NPM1-203ENST00000393820 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
NPM1-203ENST00000393820 FLIIQ13045 1269 aa8.56□□□□□ -1.04
NPM1-203ENST00000393820 ARID3AQ99856 593 aa8.56□□□□□ -1.04
NPM1-203ENST00000393820 NUP160Q12769 1436 aa8.56□□□□□ -1.04
NPM1-203ENST00000393820 PACS2Q86VP3 889 aa8.56□□□□□ -1.04
NPM1-203ENST00000393820 MTRQ99707 1265 aa8.56□□□□□ -1.04
NPM1-203ENST00000393820 GOPCQ9HD26 462 aa8.56□□□□□ -1.04
NPM1-203ENST00000393820 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
NPM1-203ENST00000393820 FHAD1B1AJZ9 1412 aa8.55□□□□□ -1.04
NPM1-203ENST00000393820 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
NPM1-203ENST00000393820 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
NPM1-203ENST00000393820 ERICH3Q5RHP9 1530 aa8.55□□□□□ -1.04
NPM1-203ENST00000393820 BIVM-ERCC5R4GMW8 1640 aa8.54□□□□□ -1.04
NPM1-203ENST00000393820 ARID3CA6NKF2 412 aa8.53□□□□□ -1.04
NPM1-203ENST00000393820 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
NPM1-203ENST00000393820 PNMA3Q9UL41 463 aa8.53□□□□□ -1.04
NPM1-203ENST00000393820 ADAMTS12P58397 1594 aa8.53□□□□□ -1.04
NPM1-203ENST00000393820 METTL3Q86U44 580 aaKnown RBP8.52□□□□□ -1.04
NPM1-203ENST00000393820 TATDN2Q93075 761 aa8.52□□□□□ -1.04
NPM1-203ENST00000393820 APBB1O00213 710 aa8.52□□□□□ -1.05
NPM1-203ENST00000393820 SHROOM2Q13796 1616 aa8.51□□□□□ -1.05
NPM1-203ENST00000393820 GGCXP38435 758 aa8.51□□□□□ -1.05
NPM1-203ENST00000393820 TTLL12Q14166 644 aaPredicted RBP8.51□□□□□ -1.05
NPM1-203ENST00000393820 PXYLP1Q8TE99 480 aa8.51□□□□□ -1.05
NPM1-203ENST00000393820 EYA1Q99502 592 aa8.51□□□□□ -1.05
NPM1-203ENST00000393820 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
NPM1-203ENST00000393820 CEP170Q5SW79 1584 aa8.51□□□□□ -1.05
NPM1-203ENST00000393820 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
NPM1-203ENST00000393820 ZNF516Q92618 1163 aa8.49□□□□□ -1.05
NPM1-203ENST00000393820 OATP04181 439 aa8.48□□□□□ -1.05
NPM1-203ENST00000393820 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
NPM1-203ENST00000393820 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
NPM1-203ENST00000393820 RCCD1A6NED2 376 aa8.48□□□□□ -1.05
NPM1-203ENST00000393820 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
NPM1-203ENST00000393820 MS4A1P11836 297 aa8.48□□□□□ -1.05
NPM1-203ENST00000393820 RBM46Q8TBY0 533 aaKnown RBP8.48□□□□□ -1.05
NPM1-203ENST00000393820 A6NJR5 290 aa8.47□□□□□ -1.05
NPM1-203ENST00000393820 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.06
NPM1-203ENST00000393820 PKDCCQ504Y2 493 aa8.46□□□□□ -1.06
NPM1-203ENST00000393820 TMUB1Q9BVT8 246 aa8.46□□□□□ -1.06
NPM1-203ENST00000393820 ERCC6L2Q5T890 1561 aa8.45□□□□□ -1.06
NPM1-203ENST00000393820 CLUAP1Q96AJ1 413 aa8.45□□□□□ -1.06
NPM1-203ENST00000393820 DGAT1O75907 488 aa8.44□□□□□ -1.06
NPM1-203ENST00000393820 MCM6Q14566 821 aa8.44□□□□□ -1.06
NPM1-203ENST00000393820 PCMTD1Q96MG8 357 aaPredicted RBP8.44□□□□□ -1.06
NPM1-203ENST00000393820 RANGAP1P46060 587 aaPredicted RBP8.44□□□□□ -1.06
NPM1-203ENST00000393820 MYT1Q01538 1121 aa8.44□□□□□ -1.06
NPM1-203ENST00000393820 CCDC82Q8N4S0 544 aa8.44□□□□□ -1.06
NPM1-203ENST00000393820 NKX2-3Q8TAU0 364 aa8.44□□□□□ -1.06
NPM1-203ENST00000393820 TRAK2O60296 914 aa8.43□□□□□ -1.06
NPM1-203ENST00000393820 SH3D19Q5HYK7 790 aa8.43□□□□□ -1.06
NPM1-203ENST00000393820 KIAA0586Q9BVV6 1533 aa8.43□□□□□ -1.06
NPM1-203ENST00000393820 HDGFP51858 240 aaKnown RBP8.42□□□□□ -1.06
NPM1-203ENST00000393820 TREML4Q6UXN2 200 aa8.42□□□□□ -1.06
NPM1-203ENST00000393820 KIF27Q86VH2 1401 aa8.42□□□□□ -1.06
NPM1-203ENST00000393820 MAPKBP1O60336 1514 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 DNAJB2P25686 324 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 APLP1P51693 650 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 SWT1Q5T5J6 900 aaKnown RBP8.41□□□□□ -1.06
NPM1-203ENST00000393820 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 GPCPD1Q9NPB8 672 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 IGF1RP08069 1367 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 RUSC2Q8N2Y8 1516 aa8.41□□□□□ -1.06
NPM1-203ENST00000393820 ABCC10Q5T3U5 1492 aa8.4□□□□□ -1.06
NPM1-203ENST00000393820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
NPM1-203ENST00000393820 POTECB2RU33 542 aa8.4□□□□□ -1.06
NPM1-203ENST00000393820 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
NPM1-203ENST00000393820 CLCN1P35523 988 aa8.39□□□□□ -1.07
NPM1-203ENST00000393820 SLC19A1P41440 591 aa8.39□□□□□ -1.07
NPM1-203ENST00000393820 CUL7Q14999 1698 aa8.39□□□□□ -1.07
NPM1-203ENST00000393820 RNF40O75150 1001 aa8.39□□□□□ -1.07
NPM1-203ENST00000393820 SSTR3P32745 418 aaPredicted RBP8.39□□□□□ -1.07
NPM1-203ENST00000393820 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
NPM1-203ENST00000393820 KIF13AQ9H1H9 1805 aa8.38□□□□□ -1.07
NPM1-203ENST00000393820 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
NPM1-203ENST00000393820 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms