RNA–Protein interactions for RNA: ENST00000392571.6

PDK1-202, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDK1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-202ENST00000392571 CCDC7Q96M83 1385 aa34.53■■■■□ 3.12
PDK1-202ENST00000392571 NWD1Q149M9 1564 aa34.52■■■■□ 3.12
PDK1-202ENST00000392571 MINK1Q8N4C8 1332 aaPredicted RBP34.51■■■■□ 3.12
PDK1-202ENST00000392571 CDCA8Q53HL2 280 aa34.46■■■■□ 3.11
PDK1-202ENST00000392571 EVC2Q86UK5 1308 aa34.46■■■■□ 3.11
PDK1-202ENST00000392571 STRCP1A6NGW2 1772 aa34.43■■■■□ 3.1
PDK1-202ENST00000392571 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.43■■■■□ 3.1
PDK1-202ENST00000392571 NKTRP30414 1462 aaKnown RBP34.42■■■■□ 3.1
PDK1-202ENST00000392571 TULP4Q9NRJ4 1543 aa34.42■■■■□ 3.1
PDK1-202ENST00000392571 PUS7Q96PZ0 661 aaKnown RBP34.41■■■■□ 3.1
PDK1-202ENST00000392571 PROSER2Q86WR7 435 aaPredicted RBP34.4■■■■□ 3.1
PDK1-202ENST00000392571 POLR3GLQ9BT43 218 aa34.4■■■■□ 3.1
PDK1-202ENST00000392571 ZNF335Q9H4Z2 1342 aaPredicted RBP34.4■■■■□ 3.1
PDK1-202ENST00000392571 CDK19Q9BWU1 502 aa34.4■■■■□ 3.1
PDK1-202ENST00000392571 WASLO00401 505 aaPredicted RBP34.38■■■■□ 3.09
PDK1-202ENST00000392571 RBM33Q96EV2 1170 aaKnown RBP34.38■■■■□ 3.09
PDK1-202ENST00000392571 DDX10Q13206 875 aaKnown RBP34.37■■■■□ 3.09
PDK1-202ENST00000392571 CABP2Q9NPB3 220 aa34.35■■■■□ 3.09
PDK1-202ENST00000392571 ADGRB2O60241 1585 aa34.34■■■■□ 3.09
PDK1-202ENST00000392571 SRPK2P78362 688 aaKnown RBP34.33■■■■□ 3.09
PDK1-202ENST00000392571 NCOA3Q9Y6Q9 1424 aa34.29■■■■□ 3.08
PDK1-202ENST00000392571 TMEM94Q12767 1356 aa34.29■■■■□ 3.08
PDK1-202ENST00000392571 ADGRL3Q9HAR2 1447 aa34.28■■■■□ 3.08
PDK1-202ENST00000392571 C14orf37Q86TY3 774 aa34.25■■■■□ 3.07
PDK1-202ENST00000392571 NALCNQ8IZF0 1738 aa34.25■■■■□ 3.07
PDK1-202ENST00000392571 LRRC7Q96NW7 1537 aa34.24■■■■□ 3.07
PDK1-202ENST00000392571 ATAD2Q6PL18 1390 aa34.24■■■■□ 3.07
PDK1-202ENST00000392571 C19orf44Q9H6X5 657 aa34.23■■■■□ 3.07
PDK1-202ENST00000392571 NUDT16Q96DE0 195 aaKnown RBP34.22■■■■□ 3.07
PDK1-202ENST00000392571 DIEXFQ68CQ4 756 aaKnown RBP34.2■■■■□ 3.07
PDK1-202ENST00000392571 PRR36Q9H6K5 1346 aa34.2■■■■□ 3.07
PDK1-202ENST00000392571 SLC12A5Q9H2X9 1139 aa34.2■■■■□ 3.06
PDK1-202ENST00000392571 CDC42BPGQ6DT37 1551 aa34.19■■■■□ 3.06
PDK1-202ENST00000392571 TMC1Q8TDI8 760 aa34.19■■■■□ 3.06
PDK1-202ENST00000392571 CCDC61Q9Y6R9 512 aa34.17■■■■□ 3.06
PDK1-202ENST00000392571 MYOM1P52179 1685 aa34.17■■■■□ 3.06
PDK1-202ENST00000392571 PANK3Q9H999 370 aa34.16■■■■□ 3.06
PDK1-202ENST00000392571 XIRP1Q702N8 1843 aaKnown RBP34.16■■■■□ 3.06
PDK1-202ENST00000392571 NINLQ9Y2I6 1382 aa34.16■■■■□ 3.06
PDK1-202ENST00000392571 NUTM2FA1L443 756 aa34.15■■■■□ 3.06
PDK1-202ENST00000392571 ATP7BP35670 1465 aa34.15■■■■□ 3.06
PDK1-202ENST00000392571 CABP1Q9NZU7 370 aa34.14■■■■□ 3.06
PDK1-202ENST00000392571 LTBP4Q8N2S1 1624 aa34.14■■■■□ 3.06
PDK1-202ENST00000392571 FMN2Q9NZ56 1722 aa34.12■■■■□ 3.05
PDK1-202ENST00000392571 ANKARQ7Z5J8 1434 aa34.11■■■■□ 3.05
PDK1-202ENST00000392571 USP32Q8NFA0 1604 aa34.1■■■■□ 3.05
PDK1-202ENST00000392571 DCCP43146 1447 aa34.1■■■■□ 3.05
PDK1-202ENST00000392571 MSH6P52701 1360 aa34.1■■■■□ 3.05
PDK1-202ENST00000392571 PPIP5K1Q6PFW1 1433 aa34.09■■■■□ 3.05
PDK1-202ENST00000392571 PER1O15534 1290 aaPredicted RBP34.09■■■■□ 3.05
PDK1-202ENST00000392571 ATF3P18847 181 aa34.08■■■■□ 3.05
PDK1-202ENST00000392571 PLEKHG3A1L390 1219 aa34.07■■■■□ 3.04
PDK1-202ENST00000392571 CADPS2Q86UW7 1296 aa34.06■■■■□ 3.04
PDK1-202ENST00000392571 CARD14Q9BXL6 1004 aa34.04■■■■□ 3.04
PDK1-202ENST00000392571 ANKRD36BQ8N2N9 1353 aa34.04■■■■□ 3.04
PDK1-202ENST00000392571 CD163L1Q9NR16 1453 aa34.04■■■■□ 3.04
PDK1-202ENST00000392571 RGPD8O14715 1765 aaPredicted RBP34.03■■■■□ 3.04
PDK1-202ENST00000392571 TOPAZ1Q8N9V7 1692 aa34.03■■■■□ 3.04
PDK1-202ENST00000392571 TERF2IPQ9NYB0 399 aa34.03■■■■□ 3.04
PDK1-202ENST00000392571 A0A1W2PP64 1363 aa34■■■■□ 3.03
PDK1-202ENST00000392571 MST1RQ04912 1400 aa33.99■■■■□ 3.03
PDK1-202ENST00000392571 CPSF1Q10570 1443 aaKnown RBP33.99■■■■□ 3.03
PDK1-202ENST00000392571 HDGFL2Q7Z4V5 671 aaPredicted RBP33.99■■■■□ 3.03
PDK1-202ENST00000392571 C1orf167Q5SNV9 1468 aa33.98■■■■□ 3.03
PDK1-202ENST00000392571 ITSN1Q15811 1721 aa33.98■■■■□ 3.03
PDK1-202ENST00000392571 ACEP12821 1306 aa33.97■■■■□ 3.03
PDK1-202ENST00000392571 PMFBP1Q8TBY8 1022 aa33.96■■■■□ 3.03
PDK1-202ENST00000392571 KNSTRNQ9Y448 316 aa33.96■■■■□ 3.03
PDK1-202ENST00000392571 ESCO1Q5FWF5 840 aa33.95■■■■□ 3.03
PDK1-202ENST00000392571 ZNF692Q9BU19 519 aaPredicted RBP33.95■■■■□ 3.03
PDK1-202ENST00000392571 ORAI2Q96SN7 254 aa33.94■■■■□ 3.02
PDK1-202ENST00000392571 PHF8Q9UPP1 1060 aa33.94■■■■□ 3.02
PDK1-202ENST00000392571 POLR3AO14802 1390 aaPredicted RBP33.93■■■■□ 3.02
PDK1-202ENST00000392571 NGDNQ8NEJ9 315 aaKnown RBP33.91■■■■□ 3.02
PDK1-202ENST00000392571 NSD3Q9BZ95 1437 aa33.91■■■■□ 3.02
PDK1-202ENST00000392571 AMER1Q5JTC6 1135 aaPredicted RBP33.9■■■■□ 3.02
PDK1-202ENST00000392571 SLAIN2Q9P270 581 aa33.9■■■■□ 3.02
PDK1-202ENST00000392571 KTN1Q86UP2 1357 aaKnown RBP33.9■■■■□ 3.02
PDK1-202ENST00000392571 AKAP12Q02952 1782 aa33.87■■■■□ 3.01
PDK1-202ENST00000392571 ANP32CO43423 234 aa33.85■■■■□ 3.01
PDK1-202ENST00000392571 NPC1L1Q9UHC9 1359 aa33.85■■■■□ 3.01
PDK1-202ENST00000392571 USP6P35125 1406 aa33.83■■■■□ 3.01
PDK1-202ENST00000392571 EDC4Q6P2E9 1401 aaKnown RBP33.83■■■■□ 3.01
PDK1-202ENST00000392571 CGNL1Q0VF96 1302 aa33.82■■■■□ 3
PDK1-202ENST00000392571 MON2Q7Z3U7 1717 aa33.81■■■■□ 3
PDK1-202ENST00000392571 CC2D1BQ5T0F9 858 aaKnown RBP33.81■■■■□ 3
PDK1-202ENST00000392571 MIER1Q8N108 512 aa33.81■■■■□ 3
PDK1-202ENST00000392571 PRKRIP1Q9H875 184 aaPredicted RBP33.81■■■■□ 3
PDK1-202ENST00000392571 SSH2Q76I76 1423 aa33.8■■■■□ 3
PDK1-202ENST00000392571 FOXO3O43524 673 aa33.8■■■■□ 3
PDK1-202ENST00000392571 BRINP3Q76B58 766 aa33.79■■■■□ 3
PDK1-202ENST00000392571 CNGB1Q14028 1251 aaPredicted RBP33.79■■■■□ 3
PDK1-202ENST00000392571 FYB1O15117 783 aa33.78■■■■□ 3
PDK1-202ENST00000392571 PSME1Q06323 249 aa33.78■■■■□ 3
PDK1-202ENST00000392571 KIF1AQ12756 1690 aa33.77■■■■□ 3
PDK1-202ENST00000392571 TTC21BQ7Z4L5 1316 aa33.77■■■■□ 3
PDK1-202ENST00000392571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.77■■■■□ 36e-7■□□□□ 10.6
PDK1-202ENST00000392571 CERKQ8TCT0 537 aa33.74■■■□□ 2.99
PDK1-202ENST00000392571 BRD4O60885 1362 aaPredicted RBP33.74■■■□□ 2.99
PDK1-202ENST00000392571 IQSEC2Q5JU85 1478 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms