RNA–Protein interactions for RNA: ENST00000392257.7

ALS2CR12-202, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALS2CR12, Length 1,943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-202ENST00000392257 VARS2Q5ST30 1063 aaKnown RBP6.87□□□□□ -1.31
ALS2CR12-202ENST00000392257 CCDC88BA6NC98 1476 aa6.86□□□□□ -1.31
ALS2CR12-202ENST00000392257 MORC4Q8TE76 937 aa6.86□□□□□ -1.31
ALS2CR12-202ENST00000392257 SOGA1O94964 1423 aa6.86□□□□□ -1.31
ALS2CR12-202ENST00000392257 CLIP1P30622 1438 aa6.86□□□□□ -1.31
ALS2CR12-202ENST00000392257 PEX14O75381 377 aa6.86□□□□□ -1.31
ALS2CR12-202ENST00000392257 FTSJ3Q8IY81 847 aaKnown RBP6.86□□□□□ -1.31
ALS2CR12-202ENST00000392257 ZNF710Q8N1W2 664 aa6.86□□□□□ -1.31
ALS2CR12-202ENST00000392257 DDX10Q13206 875 aaKnown RBP6.85□□□□□ -1.31
ALS2CR12-202ENST00000392257 TRIM52Q96A61 297 aa6.85□□□□□ -1.31
ALS2CR12-202ENST00000392257 IPO9Q96P70 1041 aaKnown RBP6.85□□□□□ -1.31
ALS2CR12-202ENST00000392257 UBA5Q9GZZ9 404 aa6.85□□□□□ -1.31
ALS2CR12-202ENST00000392257 WASHC2AQ641Q2 1341 aa6.85□□□□□ -1.31
ALS2CR12-202ENST00000392257 HMGB1P1B2RPK0 211 aaPredicted RBP6.84□□□□□ -1.31
ALS2CR12-202ENST00000392257 MAP4K4O95819 1239 aaPredicted RBP6.84□□□□□ -1.31
ALS2CR12-202ENST00000392257 FAM193AP78312 1265 aa6.84□□□□□ -1.31
ALS2CR12-202ENST00000392257 EVI5LQ96CN4 794 aa6.84□□□□□ -1.31
ALS2CR12-202ENST00000392257 CEP164Q9UPV0 1460 aa6.84□□□□□ -1.32
ALS2CR12-202ENST00000392257 TXNDC2Q86VQ3 553 aa6.84□□□□□ -1.32
ALS2CR12-202ENST00000392257 L3MBTL3Q96JM7 780 aaPredicted RBP6.84□□□□□ -1.32
ALS2CR12-202ENST00000392257 ANP32AP39687 249 aaKnown RBP6.83□□□□□ -1.32
ALS2CR12-202ENST00000392257 ANKRD13DQ6ZTN6 518 aa6.83□□□□□ -1.32
ALS2CR12-202ENST00000392257 SKIV2LQ15477 1246 aaKnown RBP6.82□□□□□ -1.32
ALS2CR12-202ENST00000392257 CDCA7Q9BWT1 371 aaPredicted RBP6.82□□□□□ -1.32
ALS2CR12-202ENST00000392257 WASHC2CQ9Y4E1 1318 aa6.82□□□□□ -1.32
ALS2CR12-202ENST00000392257 PPFIA4O75335 1185 aa6.82□□□□□ -1.32
ALS2CR12-202ENST00000392257 LONRF3Q496Y0 759 aa6.82□□□□□ -1.32
ALS2CR12-202ENST00000392257 IFNL1Q8IU54 200 aa6.82□□□□□ -1.32
ALS2CR12-202ENST00000392257 GOPCQ9HD26 462 aa6.82□□□□□ -1.32
ALS2CR12-202ENST00000392257 ABCC8Q09428 1581 aa6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 MROH2BQ7Z745 1585 aa6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 RRBP1Q9P2E9 1410 aaKnown RBP6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 PHF14O94880 888 aa6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 FOXD4Q12950 439 aaPredicted RBP6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 SMC5Q8IY18 1101 aa6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 MTA3Q9BTC8 594 aa6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 BAZ1BQ9UIG0 1483 aaKnown RBP6.81□□□□□ -1.32
ALS2CR12-202ENST00000392257 CARNS1A5YM72 827 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 GPR37O15354 613 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 HOXB3P14651 431 aaPredicted RBP6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 CCDC181Q5TID7 509 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 Q6ZNB5 142 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 PARP9Q8IXQ6 854 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 CCDC102AQ96A19 550 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 MS4A4AQ96JQ5 239 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 KLHL42Q9P2K6 505 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 MINK1Q8N4C8 1332 aaPredicted RBP6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 DPYSL4O14531 572 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 RBM46Q8TBY0 533 aaKnown RBP6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 MAGEC2Q9UBF1 373 aaPredicted RBP6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 USTQ9Y2C2 406 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 RPS6KL1Q9Y6S9 549 aa6.8□□□□□ -1.32
ALS2CR12-202ENST00000392257 BAZ1AQ9NRL2 1556 aaPredicted RBP6.79□□□□□ -1.32
ALS2CR12-202ENST00000392257 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
ALS2CR12-202ENST00000392257 KRBA2Q6ZNG9 492 aa6.79□□□□□ -1.32
ALS2CR12-202ENST00000392257 SCRIBQ14160 1630 aa6.79□□□□□ -1.32
ALS2CR12-202ENST00000392257 CECR2Q9BXF3 1484 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 CREB3O43889 395 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 MAP2K5Q13163 448 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 MYBPC2Q14324 1141 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 AMHR2Q16671 573 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 PPP1R15BQ5SWA1 713 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 RINLQ6ZS11 566 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 TSHZ1Q6ZSZ6 1077 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 GPATCH3Q96I76 525 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 METTL14Q9HCE5 456 aaKnown RBP6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 KIF21BO75037 1637 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 NACADO15069 1562 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 VTI1AQ96AJ9 217 aa6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 CHMP4BQ9H444 224 aaKnown RBP6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 ZNF330Q9Y3S2 320 aaPredicted RBP6.78□□□□□ -1.32
ALS2CR12-202ENST00000392257 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 SPDYE16A6NNV3 312 aaPredicted RBP6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 HNRNPUQ00839 825 aaKnown RBP eCLIP6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 PDIA6Q15084 440 aa6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 SF3A1Q15459 793 aaKnown RBP6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 DOK7Q18PE1 504 aa6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 ZFYVE27Q5T4F4 411 aa6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 DPH6Q7L8W6 267 aa6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 KRTAP4-6Q9BYQ5 205 aa6.77□□□□□ -1.33
ALS2CR12-202ENST00000392257 PARNO95453 639 aaKnown RBP6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 TTLL12Q14166 644 aaPredicted RBP6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 PNMA2Q9UL42 364 aa6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 SBNO2Q9Y2G9 1366 aa6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 IRF6O14896 467 aa6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 SH3BP5O60239 455 aa6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 NAALADL2Q58DX5 795 aa6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 RUSC2Q8N2Y8 1516 aa6.76□□□□□ -1.33
ALS2CR12-202ENST00000392257 CCDC194A0A1B0GVG4 234 aa6.75□□□□□ -1.33
ALS2CR12-202ENST00000392257 NUTM2FA1L443 756 aa6.75□□□□□ -1.33
ALS2CR12-202ENST00000392257 PAX3P23760 479 aa6.75□□□□□ -1.33
ALS2CR12-202ENST00000392257 PMM1Q92871 262 aa6.75□□□□□ -1.33
ALS2CR12-202ENST00000392257 PCMTD1Q96MG8 357 aaPredicted RBP6.75□□□□□ -1.33
ALS2CR12-202ENST00000392257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.75□□□□□ -1.33
ALS2CR12-202ENST00000392257 WIZO95785 1651 aa6.75□□□□□ -1.33
ALS2CR12-202ENST00000392257 CCNB3Q8WWL7 1395 aa6.74□□□□□ -1.33
ALS2CR12-202ENST00000392257 CLEC4GQ6UXB4 293 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms