RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 PPP1R15AO75807 674 aaPredicted RBP5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 CTDSPL2Q05D32 466 aa5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 FUT2Q10981 343 aa5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 DMRTA1Q5VZB9 504 aa5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 POTEEQ6S8J3 1075 aa5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 MRPL50Q8N5N7 158 aaKnown RBP5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 PNMA1Q8ND90 353 aa5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 ZFRQ96KR1 1074 aaKnown RBP5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 CALR3Q96L12 384 aaKnown RBP5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 STAC3Q96MF2 364 aa5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 AXIN2Q9Y2T1 843 aa5.38□□□□□ -1.55
TRAJ40-201ENST00000390497 ACTN4O43707 911 aaKnown RBP5.37□□□□□ -1.55
TRAJ40-201ENST00000390497 CFHP08603 1231 aa5.37□□□□□ -1.55
TRAJ40-201ENST00000390497 DESI1Q6ICB0 168 aa5.37□□□□□ -1.55
TRAJ40-201ENST00000390497 FAM205CA6NFA0 338 aa5.36□□□□□ -1.55
TRAJ40-201ENST00000390497 RETREG3Q86VR2 466 aa5.36□□□□□ -1.55
TRAJ40-201ENST00000390497 LRCH3Q96II8 777 aa5.36□□□□□ -1.55
TRAJ40-201ENST00000390497 GJD4Q96KN9 370 aaPredicted RBP5.36□□□□□ -1.55
TRAJ40-201ENST00000390497 TBC1D2BQ9UPU7 963 aa5.36□□□□□ -1.55
TRAJ40-201ENST00000390497 SALL2Q9Y467 1007 aaPredicted RBP5.36□□□□□ -1.55
TRAJ40-201ENST00000390497 GOLGA8CPA6NN73 597 aa5.35□□□□□ -1.55
TRAJ40-201ENST00000390497 SOX11P35716 441 aa5.35□□□□□ -1.55
TRAJ40-201ENST00000390497 TSC1Q92574 1164 aa5.35□□□□□ -1.55
TRAJ40-201ENST00000390497 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.35□□□□□ -1.55
TRAJ40-201ENST00000390497 ZBTB7CA1YPR0 619 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 CFAP99D6REC4 459 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 RNF40O75150 1001 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 PPP4CP60510 307 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 GUCA2AQ02747 115 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 MORN1Q5T089 497 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 HDGFL1Q5TGJ6 251 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 PRR7Q8TB68 274 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 GLMNQ92990 594 aa5.34□□□□□ -1.55
TRAJ40-201ENST00000390497 ADGRD1Q6QNK2 874 aa5.33□□□□□ -1.56
TRAJ40-201ENST00000390497 KCTD17Q8N5Z5 321 aa5.33□□□□□ -1.56
TRAJ40-201ENST00000390497 ANKK1Q8NFD2 765 aa5.33□□□□□ -1.56
TRAJ40-201ENST00000390497 HLA-CQ95604 372 aa5.33□□□□□ -1.56
TRAJ40-201ENST00000390497 MARVELD3Q96A59 401 aa5.33□□□□□ -1.56
TRAJ40-201ENST00000390497 TRAIPQ9BWF2 469 aa5.33□□□□□ -1.56
TRAJ40-201ENST00000390497 TRIM34Q9BYJ4 488 aa5.33□□□□□ -1.56
TRAJ40-201ENST00000390497 LSM11P83369 360 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 IRF5Q13568 498 aa5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 LYPD8Q6UX82 237 aa5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 LRRN4Q8WUT4 740 aa5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 FAM163AQ96GL9 167 aaPredicted RBP5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 HS3ST6Q96QI5 342 aa5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 PODXL2Q9NZ53 605 aa5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 SLC27A5Q9Y2P5 690 aa5.32□□□□□ -1.56
TRAJ40-201ENST00000390497 SOWAHBA6NEL2 793 aa5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 HRO43593 1189 aa5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 NR1I2O75469 434 aa5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 TRIM26Q12899 539 aaPredicted RBP5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 SYMPKQ92797 1274 aaKnown RBP5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 USB1Q9BQ65 265 aaKnown RBP5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 HMX1Q9NP08 348 aaPredicted RBP5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 TSR3Q9UJK0 312 aaKnown RBP5.31□□□□□ -1.56
TRAJ40-201ENST00000390497 POM121CA8CG34 1229 aa5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 FMNL1O95466 1100 aaPredicted RBP5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 EIF4G2P78344 907 aaKnown RBP eCLIP5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 SEMA3FQ13275 785 aa5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 BRICD5Q6PL45 260 aa5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 SCUBE3Q8IX30 993 aa5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 ZNF592Q92610 1267 aa5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 ALG2Q9H553 416 aa5.3□□□□□ -1.56
TRAJ40-201ENST00000390497 NR6A1Q15406 480 aa5.29□□□□□ -1.56
TRAJ40-201ENST00000390497 PUS10Q3MIT2 529 aaKnown RBP5.29□□□□□ -1.56
TRAJ40-201ENST00000390497 PBXIP1Q96AQ6 731 aa5.29□□□□□ -1.56
TRAJ40-201ENST00000390497 ZC3H4Q9UPT8 1303 aaKnown RBP5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 PATL2C9JE40 543 aaKnown RBP5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 MCCD1P59942 119 aaPredicted RBP5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 VAC14Q08AM6 782 aa5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 ANKRD13DQ6ZTN6 518 aa5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 NYAP1Q6ZVC0 841 aa5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 ARMC2Q8NEN0 867 aa5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 PPP1R12CQ9BZL4 782 aa5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 PCDHB3Q9Y5E6 796 aa5.28□□□□□ -1.56
TRAJ40-201ENST00000390497 WNT2BQ93097 391 aa5.27□□□□□ -1.57
TRAJ40-201ENST00000390497 HPS5Q9UPZ3 1129 aa5.27□□□□□ -1.57
TRAJ40-201ENST00000390497 POTEB3A0JP26 581 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 PER1O15534 1290 aaPredicted RBP5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 NR1H3Q13133 447 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 PTPRNQ16849 979 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 POTEBQ6S5H4 581 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 EPS8L1Q8TE68 723 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 GPKOWQ92917 476 aaPredicted RBP eCLIP5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 THAP11Q96EK4 314 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 FKBPLQ9UIM3 349 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 GPSM3Q9Y4H4 160 aa5.26□□□□□ -1.57
TRAJ40-201ENST00000390497 PALM3A6NDB9 673 aaPredicted RBP5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 ZBBXA8MT70 800 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 GPR37L1O60883 481 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 CSB-PGBD3P0DP91 1061 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 JUNDP17535 347 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 APLP1P51693 650 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 BLOC1S3Q6QNY0 202 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 ADAMTS19Q8TE59 1207 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 EVA1BQ9NVM1 165 aa5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 TFIP11Q9UBB9 837 aaKnown RBP5.25□□□□□ -1.57
TRAJ40-201ENST00000390497 RFX1P22670 979 aa5.24□□□□□ -1.57
TRAJ40-201ENST00000390497 LMOD1P29536 600 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms