RNA–Protein interactions for RNA: ENST00000389224.7

PDPK1-203, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 2 BASIC

Gene PDPK1, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-203ENST00000389224 SPINK5Q9NQ38 1064 aaPredicted RBP34.34■■■■□ 3.09
PDPK1-203ENST00000389224 ZNF521Q96K83 1311 aa34.33■■■■□ 3.09
PDPK1-203ENST00000389224 DUSP27Q5VZP5 1158 aa34.33■■■■□ 3.09
PDPK1-203ENST00000389224 ZFYVE9O95405 1425 aa34.32■■■■□ 3.09
PDPK1-203ENST00000389224 SRPK2P78362 688 aaKnown RBP34.32■■■■□ 3.08
PDPK1-203ENST00000389224 DMRT2Q9Y5R5 561 aa34.29■■■■□ 3.08
PDPK1-203ENST00000389224 GOLGA2Q08379 1002 aa34.29■■■■□ 3.08
PDPK1-203ENST00000389224 C20orf194Q5TEA3 1177 aa34.28■■■■□ 3.08
PDPK1-203ENST00000389224 POGKQ9P215 609 aa34.26■■■■□ 3.08
PDPK1-203ENST00000389224 KIF13AQ9H1H9 1805 aa34.26■■■■□ 3.08
PDPK1-203ENST00000389224 YTHDC2Q9H6S0 1430 aaKnown RBP34.25■■■■□ 3.07
PDPK1-203ENST00000389224 PTPRMP28827 1452 aa34.25■■■■□ 3.07
PDPK1-203ENST00000389224 CGNL1Q0VF96 1302 aa34.25■■■■□ 3.07
PDPK1-203ENST00000389224 MTHFSP49914 203 aa34.24■■■■□ 3.07
PDPK1-203ENST00000389224 ANKRD36BQ8N2N9 1353 aa34.22■■■■□ 3.07
PDPK1-203ENST00000389224 CRBNQ96SW2 442 aa34.22■■■■□ 3.07
PDPK1-203ENST00000389224 AGLP35573 1532 aa34.22■■■■□ 3.07
PDPK1-203ENST00000389224 POLR3AO14802 1390 aaPredicted RBP34.22■■■■□ 3.07
PDPK1-203ENST00000389224 ALKQ9UM73 1620 aa34.21■■■■□ 3.07
PDPK1-203ENST00000389224 SLFN5Q08AF3 891 aa34.21■■■■□ 3.07
PDPK1-203ENST00000389224 NEUROD2Q15784 382 aa34.21■■■■□ 3.07
PDPK1-203ENST00000389224 RRP7AQ9Y3A4 280 aaKnown RBP34.2■■■■□ 3.07
PDPK1-203ENST00000389224 A0A1W2PP64 1363 aa34.2■■■■□ 3.07
PDPK1-203ENST00000389224 WAPLQ7Z5K2 1190 aa34.19■■■■□ 3.06
PDPK1-203ENST00000389224 REREQ9P2R6 1566 aa34.19■■■■□ 3.06
PDPK1-203ENST00000389224 A2ML1A8K2U0 1454 aa34.18■■■■□ 3.06
PDPK1-203ENST00000389224 GGNBP2Q9H3C7 697 aa34.17■■■■□ 3.06
PDPK1-203ENST00000389224 MSH5O43196 834 aa34.16■■■■□ 3.06
PDPK1-203ENST00000389224 SHPRHQ149N8 1683 aa34.16■■■■□ 3.06
PDPK1-203ENST00000389224 PUS7Q96PZ0 661 aaKnown RBP34.13■■■■□ 3.05
PDPK1-203ENST00000389224 PPP6R1Q9UPN7 881 aa34.13■■■■□ 3.05
PDPK1-203ENST00000389224 CDK19Q9BWU1 502 aa34.12■■■■□ 3.05
PDPK1-203ENST00000389224 RIMS2Q9UQ26 1411 aa34.12■■■■□ 3.05
PDPK1-203ENST00000389224 SPATA31D1Q6ZQQ2 1576 aa34.11■■■■□ 3.05
PDPK1-203ENST00000389224 ARHGEF40Q8TER5 1519 aa34.1■■■■□ 3.05
PDPK1-203ENST00000389224 SKAP1Q86WV1 359 aa34.1■■■■□ 3.05
PDPK1-203ENST00000389224 TRMT2AQ8IZ69 625 aaKnown RBP34.1■■■■□ 3.05
PDPK1-203ENST00000389224 ESF1Q9H501 851 aaKnown RBP34.1■■■■□ 3.05
PDPK1-203ENST00000389224 USP32Q8NFA0 1604 aa34.1■■■■□ 3.05
PDPK1-203ENST00000389224 ZMYM3Q14202 1370 aa34.09■■■■□ 3.05
PDPK1-203ENST00000389224 CABP1Q9NZU7 370 aa34.08■■■■□ 3.05
PDPK1-203ENST00000389224 WWC1Q8IX03 1113 aa34.07■■■■□ 3.04
PDPK1-203ENST00000389224 BCAR3O75815 825 aa34.05■■■■□ 3.04
PDPK1-203ENST00000389224 CD163L1Q9NR16 1453 aa34.05■■■■□ 3.04
PDPK1-203ENST00000389224 TCP11L2Q8N4U5 519 aa34.04■■■■□ 3.04
PDPK1-203ENST00000389224 ABCC11Q96J66 1382 aa34.03■■■■□ 3.04
PDPK1-203ENST00000389224 FYB1O15117 783 aa34.03■■■■□ 3.04
PDPK1-203ENST00000389224 FBLN1P23142 703 aa34.01■■■■□ 3.04
PDPK1-203ENST00000389224 RUNDC1Q96C34 613 aa34.01■■■■□ 3.04
PDPK1-203ENST00000389224 ATAD2Q6PL18 1390 aa34.01■■■■□ 3.04
PDPK1-203ENST00000389224 E9PSI1 815 aa34.01■■■■□ 3.03
PDPK1-203ENST00000389224 FANCIQ9NVI1 1328 aa34■■■■□ 3.03
PDPK1-203ENST00000389224 U2AF1L5P0DN76 240 aaPredicted RBP34■■■■□ 3.03
PDPK1-203ENST00000389224 U2AF1Q01081 240 aaKnown RBP eCLIP34■■■■□ 3.03
PDPK1-203ENST00000389224 CFAP53Q96M91 514 aa34■■■■□ 3.03
PDPK1-203ENST00000389224 TERF2IPQ9NYB0 399 aa33.99■■■■□ 3.03
PDPK1-203ENST00000389224 METP08581 1390 aa33.99■■■■□ 3.03
PDPK1-203ENST00000389224 NKTRP30414 1462 aaKnown RBP33.99■■■■□ 3.03
PDPK1-203ENST00000389224 TXNDC2Q86VQ3 553 aa33.98■■■■□ 3.03
PDPK1-203ENST00000389224 PLPPR3Q6T4P5 718 aa33.98■■■■□ 3.03
PDPK1-203ENST00000389224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.98■■■■□ 3.035e-9■■□□□ 12
PDPK1-203ENST00000389224 NSD2O96028 1365 aa33.97■■■■□ 3.03
PDPK1-203ENST00000389224 SETD1AO15047 1707 aaKnown RBP33.95■■■■□ 3.03
PDPK1-203ENST00000389224 NINLQ9Y2I6 1382 aa33.94■■■■□ 3.02
PDPK1-203ENST00000389224 U2SURPO15042 1029 aaKnown RBP33.93■■■■□ 3.02
PDPK1-203ENST00000389224 NCKAP5LQ9HCH0 1330 aa33.93■■■■□ 3.02
PDPK1-203ENST00000389224 NRXN3Q9Y4C0 1643 aa33.93■■■■□ 3.02
PDPK1-203ENST00000389224 CEBPAP49715 358 aaPredicted RBP33.92■■■■□ 3.02
PDPK1-203ENST00000389224 IQSEC2Q5JU85 1478 aa33.91■■■■□ 3.02
PDPK1-203ENST00000389224 HDGFL2Q7Z4V5 671 aaPredicted RBP33.91■■■■□ 3.02
PDPK1-203ENST00000389224 NLRP1Q9C000 1473 aa33.91■■■■□ 3.02
PDPK1-203ENST00000389224 ANP32EQ9BTT0 268 aa33.91■■■■□ 3.02
PDPK1-203ENST00000389224 TNRQ92752 1358 aa33.87■■■■□ 3.01
PDPK1-203ENST00000389224 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.84■■■■□ 3.01
PDPK1-203ENST00000389224 PPM1GO15355 546 aaPredicted RBP33.84■■■■□ 3.01
PDPK1-203ENST00000389224 PHF23Q9BUL5 403 aaPredicted RBP33.84■■■■□ 3.01
PDPK1-203ENST00000389224 NGEFQ8N5V2 710 aa33.83■■■■□ 3.01
PDPK1-203ENST00000389224 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.82■■■■□ 3
PDPK1-203ENST00000389224 DLC1Q96QB1 1528 aa33.81■■■■□ 3
PDPK1-203ENST00000389224 ZRANB1Q9UGI0 708 aa33.81■■■■□ 3
PDPK1-203ENST00000389224 BCL2L13Q9BXK5 485 aa33.81■■■■□ 3
PDPK1-203ENST00000389224 WASLO00401 505 aaPredicted RBP33.8■■■■□ 3
PDPK1-203ENST00000389224 COL3A1P02461 1466 aaPredicted RBP33.79■■■■□ 3
PDPK1-203ENST00000389224 FRAT1Q92837 279 aaPredicted RBP33.78■■■■□ 3
PDPK1-203ENST00000389224 PLEKHF1Q96S99 279 aa33.77■■■■□ 3
PDPK1-203ENST00000389224 LTKP29376 864 aa33.77■■■■□ 3
PDPK1-203ENST00000389224 PANK1Q8TE04 598 aa33.77■■■■□ 3
PDPK1-203ENST00000389224 ANKRD26Q9UPS8 1709 aa33.76■■■□□ 2.99
PDPK1-203ENST00000389224 KDM2BQ8NHM5 1336 aa33.76■■■□□ 2.99
PDPK1-203ENST00000389224 TNNQ9UQP3 1299 aa33.75■■■□□ 2.99
PDPK1-203ENST00000389224 TMEM2Q9UHN6 1383 aa33.75■■■□□ 2.99
PDPK1-203ENST00000389224 NME9Q86XW9 330 aa33.75■■■□□ 2.99
PDPK1-203ENST00000389224 NUTM2FA1L443 756 aa33.74■■■□□ 2.99
PDPK1-203ENST00000389224 TCERG1O14776 1098 aaKnown RBP33.74■■■□□ 2.99
PDPK1-203ENST00000389224 PPIP5K1Q6PFW1 1433 aa33.74■■■□□ 2.99
PDPK1-203ENST00000389224 WDR63Q8IWG1 891 aa33.73■■■□□ 2.99
PDPK1-203ENST00000389224 TSR2Q969E8 191 aaKnown RBP33.73■■■□□ 2.99
PDPK1-203ENST00000389224 NUDT16Q96DE0 195 aaKnown RBP33.73■■■□□ 2.99
PDPK1-203ENST00000389224 KIF20BQ96Q89 1820 aa33.73■■■□□ 2.99
PDPK1-203ENST00000389224 UBR1Q8IWV7 1749 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms