RNA–Protein interactions for RNA: ENST00000382203.5

SMARCA2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-209ENST00000382203 FAM193AP78312 1265 aa14.8□□□□□ -0.04
SMARCA2-209ENST00000382203 TRIM29Q14134 588 aa14.8□□□□□ -0.04
SMARCA2-209ENST00000382203 CNKSR2Q8WXI2 1034 aa14.8□□□□□ -0.04
SMARCA2-209ENST00000382203 CFAP57Q96MR6 1250 aa14.79□□□□□ -0.04
SMARCA2-209ENST00000382203 MNAT1P51948 309 aa14.79□□□□□ -0.04
SMARCA2-209ENST00000382203 CCDC175P0C221 793 aa14.79□□□□□ -0.04
SMARCA2-209ENST00000382203 TDO2P48775 406 aa14.78□□□□□ -0.04
SMARCA2-209ENST00000382203 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
SMARCA2-209ENST00000382203 OLFM4Q6UX06 510 aa14.78□□□□□ -0.04
SMARCA2-209ENST00000382203 CFAP45Q9UL16 551 aa14.78□□□□□ -0.04
SMARCA2-209ENST00000382203 HMGB1P09429 215 aaKnown RBP14.77□□□□□ -0.04
SMARCA2-209ENST00000382203 CARMIL2Q6F5E8 1435 aa14.77□□□□□ -0.04
SMARCA2-209ENST00000382203 MICALCLQ6ZW33 695 aa14.77□□□□□ -0.05
SMARCA2-209ENST00000382203 DNAJC2Q99543 621 aaKnown RBP14.77□□□□□ -0.05
SMARCA2-209ENST00000382203 TMCO3Q6UWJ1 677 aa14.77□□□□□ -0.05
SMARCA2-209ENST00000382203 SMARCE1Q969G3 411 aa14.77□□□□□ -0.05
SMARCA2-209ENST00000382203 SETSIPP0DME0 302 aa14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 CENPQQ7L2Z9 268 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 MAP2K1Q02750 393 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 C1orf141Q5JVX7 400 aa14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 RILPL2Q969X0 211 aa14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 CLUAP1Q96AJ1 413 aa14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 VPS37CA5D8V6 355 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 PPM1EQ8WY54 764 aa14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 PDCL3Q9H2J4 239 aa14.76□□□□□ -0.05
SMARCA2-209ENST00000382203 PLCD3Q8N3E9 789 aa14.75□□□□□ -0.05
SMARCA2-209ENST00000382203 DNAAF4Q8WXU2 420 aa14.75□□□□□ -0.05
SMARCA2-209ENST00000382203 RAD21O60216 631 aa14.75□□□□□ -0.05
SMARCA2-209ENST00000382203 LTV1Q96GA3 475 aaPredicted RBP14.75□□□□□ -0.05
SMARCA2-209ENST00000382203 GBP2P32456 591 aaPredicted RBP14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 CWC22Q9HCG8 908 aaKnown RBP14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 TRAK2O60296 914 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 SMC2O95347 1197 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 CGNL1Q0VF96 1302 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 PHLDB1Q86UU1 1377 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 ANKRD30AQ9BXX3 1397 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 CCDC181Q5TID7 509 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 EPS15P42566 896 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 PAXIP1Q6ZW49 1069 aaPredicted RBP14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 DAAM2Q86T65 1068 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 WDR66Q8TBY9 1149 aa14.74□□□□□ -0.05
SMARCA2-209ENST00000382203 MSH5O43196 834 aa14.73□□□□□ -0.05
SMARCA2-209ENST00000382203 TIGD1Q96MW7 591 aa14.73□□□□□ -0.05
SMARCA2-209ENST00000382203 LETM1O95202 739 aaPredicted RBP14.73□□□□□ -0.05
SMARCA2-209ENST00000382203 PDE3BQ13370 1112 aa14.73□□□□□ -0.05
SMARCA2-209ENST00000382203 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
SMARCA2-209ENST00000382203 FAM114A1Q8IWE2 563 aa14.73□□□□□ -0.05
SMARCA2-209ENST00000382203 CPLX1O14810 134 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 SDF4Q9BRK5 362 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 CARMIL1Q5VZK9 1371 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 SUDS3Q9H7L9 328 aaPredicted RBP14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 TSPY26PQ9H489 355 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 NUP155O75694 1391 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 ESPNB1AK53 854 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 EVA1CP58658 441 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 KIAA1328Q86T90 577 aa14.72□□□□□ -0.05
SMARCA2-209ENST00000382203 GTF2F1P35269 517 aaKnown RBP eCLIP14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 REC8O95072 547 aa14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 DHX8Q14562 1220 aaKnown RBP14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 SPC24Q8NBT2 197 aa14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 CCDC43Q96MW1 224 aaKnown RBP14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 CPSF2Q9P2I0 782 aaKnown RBP14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 SMC3Q9UQE7 1217 aa14.71□□□□□ -0.05
SMARCA2-209ENST00000382203 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.06
SMARCA2-209ENST00000382203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.7□□□□□ -0.06
SMARCA2-209ENST00000382203 UBXN4Q92575 508 aa14.7□□□□□ -0.06
SMARCA2-209ENST00000382203 CRACR2AQ9BSW2 395 aa14.7□□□□□ -0.06
SMARCA2-209ENST00000382203 SARNPP82979 210 aaKnown RBP14.7□□□□□ -0.06
SMARCA2-209ENST00000382203 FILIP1LQ4L180 1135 aa14.7□□□□□ -0.06
SMARCA2-209ENST00000382203 CCDC91Q7Z6B0 441 aa14.7□□□□□ -0.06
SMARCA2-209ENST00000382203 DHX16O60231 1041 aaKnown RBP14.69□□□□□ -0.06
SMARCA2-209ENST00000382203 STAMBPO95630 424 aa14.69□□□□□ -0.06
SMARCA2-209ENST00000382203 MBD3O95983 291 aa14.69□□□□□ -0.06
SMARCA2-209ENST00000382203 NACADO15069 1562 aa14.69□□□□□ -0.06
SMARCA2-209ENST00000382203 FOXD1Q16676 465 aa14.69□□□□□ -0.06
SMARCA2-209ENST00000382203 TTC5Q8N0Z6 440 aa14.69□□□□□ -0.06
SMARCA2-209ENST00000382203 MPHOSPH9Q99550 1183 aa14.68□□□□□ -0.06
SMARCA2-209ENST00000382203 IQCEQ6IPM2 695 aa14.68□□□□□ -0.06
SMARCA2-209ENST00000382203 GBP3Q9H0R5 595 aa14.68□□□□□ -0.06
SMARCA2-209ENST00000382203 CUX2O14529 1486 aa14.68□□□□□ -0.06
SMARCA2-209ENST00000382203 PAF1Q8N7H5 531 aa14.68□□□□□ -0.06
SMARCA2-209ENST00000382203 ANO2Q9NQ90 1003 aa14.68□□□□□ -0.06
SMARCA2-209ENST00000382203 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
SMARCA2-209ENST00000382203 ANKRD45Q5TZF3 282 aa14.67□□□□□ -0.06
SMARCA2-209ENST00000382203 ERICH2A1L162 156 aa14.67□□□□□ -0.06
SMARCA2-209ENST00000382203 BMS1Q14692 1282 aaKnown RBP14.67□□□□□ -0.06
SMARCA2-209ENST00000382203 VPS37DQ86XT2 251 aa14.67□□□□□ -0.06
SMARCA2-209ENST00000382203 ZNHIT6Q9NWK9 470 aaKnown RBP14.66□□□□□ -0.06
SMARCA2-209ENST00000382203 FMNL2Q96PY5 1086 aa14.66□□□□□ -0.06
SMARCA2-209ENST00000382203 FAM177A1Q8N128 213 aaPredicted RBP14.66□□□□□ -0.06
SMARCA2-209ENST00000382203 TXLNAP40222 546 aa14.66□□□□□ -0.06
SMARCA2-209ENST00000382203 NFXL1Q6ZNB6 911 aa14.65□□□□□ -0.06
SMARCA2-209ENST00000382203 TRDNQ13061 729 aa14.65□□□□□ -0.06
SMARCA2-209ENST00000382203 LUZP1Q86V48 1076 aa14.65□□□□□ -0.06
SMARCA2-209ENST00000382203 DDX23Q9BUQ8 820 aaKnown RBP14.65□□□□□ -0.06
SMARCA2-209ENST00000382203 KIF3BO15066 747 aa14.65□□□□□ -0.06
SMARCA2-209ENST00000382203 NLRP13Q86W25 1043 aa14.65□□□□□ -0.06
SMARCA2-209ENST00000382203 COG3Q96JB2 828 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms