RNA–Protein interactions for RNA: ENST00000381984.2

RFX3-203, Transcript of regulatory factor X3, humanhuman

TSL 3 BASIC

Gene RFX3, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-203ENST00000381984 H3BM21 787 aa6.13□□□□□ -1.43
RFX3-203ENST00000381984 ZBTB24O43167 697 aaPredicted RBP6.12□□□□□ -1.43
RFX3-203ENST00000381984 KDM2AQ9Y2K7 1162 aa6.12□□□□□ -1.43
RFX3-203ENST00000381984 MORN1Q5T089 497 aa6.11□□□□□ -1.43
RFX3-203ENST00000381984 PRDM9Q9NQV7 894 aa6.11□□□□□ -1.43
RFX3-203ENST00000381984 TRIM32Q13049 653 aa6.09□□□□□ -1.43
RFX3-203ENST00000381984 PTGDRQ13258 359 aa6.09□□□□□ -1.43
RFX3-203ENST00000381984 TRIM46Q7Z4K8 759 aa6.09□□□□□ -1.43
RFX3-203ENST00000381984 FMNL1O95466 1100 aaPredicted RBP6.08□□□□□ -1.44
RFX3-203ENST00000381984 TMEM151AQ8N4L1 468 aa6.08□□□□□ -1.44
RFX3-203ENST00000381984 SLC27A5Q9Y2P5 690 aa6.08□□□□□ -1.44
RFX3-203ENST00000381984 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.07□□□□□ -1.44
RFX3-203ENST00000381984 MLLT3P42568 568 aaPredicted RBP6.07□□□□□ -1.44
RFX3-203ENST00000381984 BRICD5Q6PL45 260 aa6.07□□□□□ -1.44
RFX3-203ENST00000381984 P3H3Q8IVL6 736 aa6.07□□□□□ -1.44
RFX3-203ENST00000381984 SEMA3EO15041 775 aa6.06□□□□□ -1.44
RFX3-203ENST00000381984 BMP1P13497 986 aa6.06□□□□□ -1.44
RFX3-203ENST00000381984 ARHGEF1Q92888 912 aaKnown RBP6.06□□□□□ -1.44
RFX3-203ENST00000381984 GDF11O95390 407 aa6.05□□□□□ -1.44
RFX3-203ENST00000381984 FECHP22830 423 aa6.05□□□□□ -1.44
RFX3-203ENST00000381984 RASSF7Q02833 373 aa6.05□□□□□ -1.44
RFX3-203ENST00000381984 FUT2Q10981 343 aa6.05□□□□□ -1.44
RFX3-203ENST00000381984 XP32Q5T750 250 aa6.05□□□□□ -1.44
RFX3-203ENST00000381984 RC3H1Q5TC82 1133 aaKnown RBP6.05□□□□□ -1.44
RFX3-203ENST00000381984 SALL2Q9Y467 1007 aaPredicted RBP6.05□□□□□ -1.44
RFX3-203ENST00000381984 ATP6V1AP38606 617 aa6.04□□□□□ -1.44
RFX3-203ENST00000381984 SKOR1P84550 965 aa6.04□□□□□ -1.44
RFX3-203ENST00000381984 RSPH4AQ5TD94 716 aa6.04□□□□□ -1.44
RFX3-203ENST00000381984 VSIG10Q8N0Z9 540 aa6.04□□□□□ -1.44
RFX3-203ENST00000381984 PXYLP1Q8TE99 480 aa6.03□□□□□ -1.44
RFX3-203ENST00000381984 REPIN1Q9BWE0 567 aaKnown RBP6.03□□□□□ -1.44
RFX3-203ENST00000381984 NUTM2FA1L443 756 aa6.02□□□□□ -1.45
RFX3-203ENST00000381984 ALDH1A1P00352 501 aa6.02□□□□□ -1.45
RFX3-203ENST00000381984 MSS51Q4VC12 460 aa6.02□□□□□ -1.45
RFX3-203ENST00000381984 RNF19BQ6ZMZ0 732 aa6.02□□□□□ -1.45
RFX3-203ENST00000381984 CAPN5O15484 640 aaPredicted RBP6.01□□□□□ -1.45
RFX3-203ENST00000381984 VSIG8P0DPA2 414 aa6.01□□□□□ -1.45
RFX3-203ENST00000381984 MMP16P51512 607 aa6□□□□□ -1.45
RFX3-203ENST00000381984 ZFP42Q96MM3 310 aa6□□□□□ -1.45
RFX3-203ENST00000381984 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
RFX3-203ENST00000381984 SIAH2O43255 324 aa5.99□□□□□ -1.45
RFX3-203ENST00000381984 OATP04181 439 aa5.98□□□□□ -1.45
RFX3-203ENST00000381984 WNT7BP56706 349 aa5.98□□□□□ -1.45
RFX3-203ENST00000381984 RBM26Q5T8P6 1007 aaKnown RBP5.98□□□□□ -1.45
RFX3-203ENST00000381984 RDH13Q8NBN7 331 aa5.98□□□□□ -1.45
RFX3-203ENST00000381984 TTBK1Q5TCY1 1321 aaPredicted RBP5.98□□□□□ -1.45
RFX3-203ENST00000381984 GCGRP47871 477 aa5.97□□□□□ -1.45
RFX3-203ENST00000381984 ADAMTS8Q9UP79 889 aa5.97□□□□□ -1.45
RFX3-203ENST00000381984 SOBPA7XYQ1 873 aa5.96□□□□□ -1.46
RFX3-203ENST00000381984 METTL3Q86U44 580 aaKnown RBP5.96□□□□□ -1.46
RFX3-203ENST00000381984 DAXXQ9UER7 740 aaPredicted RBP5.96□□□□□ -1.46
RFX3-203ENST00000381984 DDX11L8A8MPP1 907 aa5.95□□□□□ -1.46
RFX3-203ENST00000381984 DXOO77932 396 aaKnown RBP5.95□□□□□ -1.46
RFX3-203ENST00000381984 GPAT2Q6NUI2 795 aa5.95□□□□□ -1.46
RFX3-203ENST00000381984 TESPA1A2RU30 521 aaPredicted RBP5.94□□□□□ -1.46
RFX3-203ENST00000381984 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
RFX3-203ENST00000381984 SMYD5Q6GMV2 418 aa5.94□□□□□ -1.46
RFX3-203ENST00000381984 CCDC24Q8N4L8 307 aa5.94□□□□□ -1.46
RFX3-203ENST00000381984 FCHSD2O94868 740 aa5.93□□□□□ -1.46
RFX3-203ENST00000381984 WASF2Q9Y6W5 498 aa5.93□□□□□ -1.46
RFX3-203ENST00000381984 TULP1O00294 542 aaPredicted RBP5.92□□□□□ -1.46
RFX3-203ENST00000381984 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
RFX3-203ENST00000381984 IGHA1P01876 353 aa5.91□□□□□ -1.46
RFX3-203ENST00000381984 KRT76Q01546 638 aa5.91□□□□□ -1.46
RFX3-203ENST00000381984 NLRP7Q8WX94 980 aa5.91□□□□□ -1.46
RFX3-203ENST00000381984 RNF225M0QZC1 329 aaPredicted RBP5.9□□□□□ -1.46
RFX3-203ENST00000381984 PPFIA3O75145 1194 aa5.9□□□□□ -1.46
RFX3-203ENST00000381984 Q3C1V9 767 aa5.9□□□□□ -1.46
RFX3-203ENST00000381984 MRPL14Q6P1L8 145 aaKnown RBP5.9□□□□□ -1.46
RFX3-203ENST00000381984 GPIHBP1Q8IV16 184 aa5.9□□□□□ -1.46
RFX3-203ENST00000381984 PURBQ96QR8 312 aaKnown RBP5.9□□□□□ -1.46
RFX3-203ENST00000381984 USB1Q9BQ65 265 aaKnown RBP5.9□□□□□ -1.46
RFX3-203ENST00000381984 DNMT3AQ9Y6K1 912 aaPredicted RBP5.9□□□□□ -1.46
RFX3-203ENST00000381984 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
RFX3-203ENST00000381984 SLC24A1O60721 1099 aa5.89□□□□□ -1.47
RFX3-203ENST00000381984 IRS1P35568 1242 aa5.89□□□□□ -1.47
RFX3-203ENST00000381984 PTCRAQ6ISU1 281 aaPredicted RBP5.89□□□□□ -1.47
RFX3-203ENST00000381984 GPR161Q8N6U8 529 aaKnown RBP5.89□□□□□ -1.47
RFX3-203ENST00000381984 EHBP1Q8NDI1 1231 aa5.89□□□□□ -1.47
RFX3-203ENST00000381984 SCARF1Q14162 830 aa5.88□□□□□ -1.47
RFX3-203ENST00000381984 GRIPAP1Q4V328 841 aa5.87□□□□□ -1.47
RFX3-203ENST00000381984 CNTNAP3BQ96NU0 1288 aa5.87□□□□□ -1.47
RFX3-203ENST00000381984 CNTNAP3Q9BZ76 1288 aa5.87□□□□□ -1.47
RFX3-203ENST00000381984 PSMG3-AS1Q96PY0 264 aa5.86□□□□□ -1.47
RFX3-203ENST00000381984 ADAM23O75077 832 aa5.85□□□□□ -1.47
RFX3-203ENST00000381984 SH3BP2P78314 561 aa5.85□□□□□ -1.47
RFX3-203ENST00000381984 ZNF385CQ66K41 422 aaPredicted RBP5.85□□□□□ -1.47
RFX3-203ENST00000381984 SULF1Q8IWU6 871 aa5.85□□□□□ -1.47
RFX3-203ENST00000381984 PHOX2BQ99453 314 aa5.85□□□□□ -1.47
RFX3-203ENST00000381984 GNPATO15228 680 aa5.84□□□□□ -1.47
RFX3-203ENST00000381984 TIMP2P16035 220 aa5.84□□□□□ -1.47
RFX3-203ENST00000381984 FOXK2Q01167 660 aa5.84□□□□□ -1.47
RFX3-203ENST00000381984 KLF16Q9BXK1 252 aaPredicted RBP5.84□□□□□ -1.47
RFX3-203ENST00000381984 MAN1A2O60476 641 aa5.83□□□□□ -1.48
RFX3-203ENST00000381984 ARHGEF15O94989 841 aa5.83□□□□□ -1.48
RFX3-203ENST00000381984 HIC1Q14526 733 aa5.83□□□□□ -1.48
RFX3-203ENST00000381984 WHAMMQ8TF30 809 aa5.83□□□□□ -1.48
RFX3-203ENST00000381984 WDR4P57081 412 aaKnown RBP5.82□□□□□ -1.48
RFX3-203ENST00000381984 NNTQ13423 1086 aa5.82□□□□□ -1.48
RFX3-203ENST00000381984 HLA-CQ95604 372 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms