RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 TXNDC2Q86VQ3 553 aa20.97■□□□□ 0.95
SGCB-201ENST00000381431 RUFY2Q8WXA3 655 aa20.96■□□□□ 0.95
SGCB-201ENST00000381431 CDC45O75419 566 aa20.96■□□□□ 0.95
SGCB-201ENST00000381431 RAPGEF3O95398 923 aa20.96■□□□□ 0.95
SGCB-201ENST00000381431 SNAPC4Q5SXM2 1469 aa20.96■□□□□ 0.95
SGCB-201ENST00000381431 KIF3AQ9Y496 699 aa20.96■□□□□ 0.95
SGCB-201ENST00000381431 ROCK1Q13464 1354 aa20.95■□□□□ 0.94
SGCB-201ENST00000381431 VPS37CA5D8V6 355 aaPredicted RBP20.95■□□□□ 0.94
SGCB-201ENST00000381431 TTC5Q8N0Z6 440 aa20.95■□□□□ 0.94
SGCB-201ENST00000381431 AIMP1Q12904 312 aaKnown RBP20.94■□□□□ 0.94
SGCB-201ENST00000381431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.94■□□□□ 0.94
SGCB-201ENST00000381431 NUCB2P80303 420 aa20.94■□□□□ 0.94
SGCB-201ENST00000381431 HSP90AA2PQ14568 343 aaPredicted RBP20.94■□□□□ 0.94
SGCB-201ENST00000381431 CREBRFQ8IUR6 639 aa20.94■□□□□ 0.94
SGCB-201ENST00000381431 SLFN5Q08AF3 891 aa20.93■□□□□ 0.94
SGCB-201ENST00000381431 WWC1Q8IX03 1113 aa20.93■□□□□ 0.94
SGCB-201ENST00000381431 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
SGCB-201ENST00000381431 ABCC5O15440 1437 aa20.93■□□□□ 0.94
SGCB-201ENST00000381431 TRAK2O60296 914 aa20.93■□□□□ 0.94
SGCB-201ENST00000381431 GTF2E1P29083 439 aaPredicted RBP20.93■□□□□ 0.94
SGCB-201ENST00000381431 SULT6B1Q6IMI4 303 aa20.93■□□□□ 0.94
SGCB-201ENST00000381431 ATF7IPQ6VMQ6 1270 aa20.93■□□□□ 0.94
SGCB-201ENST00000381431 G3BP1Q13283 466 aaKnown RBP eCLIP20.92■□□□□ 0.94
SGCB-201ENST00000381431 IL27Q8NEV9 243 aa20.92■□□□□ 0.94
SGCB-201ENST00000381431 CDK19Q9BWU1 502 aa20.92■□□□□ 0.94
SGCB-201ENST00000381431 CC2D2AQ9P2K1 1620 aa20.92■□□□□ 0.94
SGCB-201ENST00000381431 UBTFL1P0CB47 393 aaPredicted RBP20.92■□□□□ 0.94
SGCB-201ENST00000381431 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
SGCB-201ENST00000381431 MRC2Q9UBG0 1479 aa20.91■□□□□ 0.94
SGCB-201ENST00000381431 SUPT6HQ7KZ85 1726 aaKnown RBP20.91■□□□□ 0.94
SGCB-201ENST00000381431 TPM4P67936 248 aa20.91■□□□□ 0.94
SGCB-201ENST00000381431 WDR63Q8IWG1 891 aa20.9■□□□□ 0.94
SGCB-201ENST00000381431 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
SGCB-201ENST00000381431 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
SGCB-201ENST00000381431 HECW1Q76N89 1606 aa20.9■□□□□ 0.94
SGCB-201ENST00000381431 BECN2A8MW95 431 aa20.9■□□□□ 0.94
SGCB-201ENST00000381431 MVPQ14764 893 aaKnown RBP20.9■□□□□ 0.94
SGCB-201ENST00000381431 NEK4P51957 841 aa20.89■□□□□ 0.94
SGCB-201ENST00000381431 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.93
SGCB-201ENST00000381431 RNF214Q8ND24 703 aa20.89■□□□□ 0.93
SGCB-201ENST00000381431 SMC3Q9UQE7 1217 aa20.89■□□□□ 0.93
SGCB-201ENST00000381431 ARHGEF11O15085 1522 aa20.89■□□□□ 0.93
SGCB-201ENST00000381431 DDX58O95786 925 aaKnown RBP20.89■□□□□ 0.93
SGCB-201ENST00000381431 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
SGCB-201ENST00000381431 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
SGCB-201ENST00000381431 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
SGCB-201ENST00000381431 GOLGA6L19H0YKK7 550 aa20.88■□□□□ 0.93
SGCB-201ENST00000381431 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
SGCB-201ENST00000381431 THUMPD2Q9BTF0 503 aaKnown RBP20.87■□□□□ 0.93
SGCB-201ENST00000381431 CCDC34Q96HJ3 373 aa20.86■□□□□ 0.93
SGCB-201ENST00000381431 ZNF428Q96B54 188 aa20.86■□□□□ 0.93
SGCB-201ENST00000381431 NLRP2Q9NX02 1062 aa20.86■□□□□ 0.93
SGCB-201ENST00000381431 RRS1Q15050 365 aaKnown RBP20.85■□□□□ 0.93
SGCB-201ENST00000381431 BICD2Q8TD16 824 aa20.85■□□□□ 0.93
SGCB-201ENST00000381431 NCOA1Q15788 1441 aa20.85■□□□□ 0.93
SGCB-201ENST00000381431 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
SGCB-201ENST00000381431 ABTB2Q8N961 1025 aa20.85■□□□□ 0.93
SGCB-201ENST00000381431 RAPGEF4Q8WZA2 1011 aa20.84■□□□□ 0.93
SGCB-201ENST00000381431 FOSBP53539 338 aa20.84■□□□□ 0.93
SGCB-201ENST00000381431 EVA1CP58658 441 aa20.84■□□□□ 0.93
SGCB-201ENST00000381431 RIC3Q7Z5B4 369 aa20.84■□□□□ 0.93
SGCB-201ENST00000381431 GNAI3P08754 354 aa20.84■□□□□ 0.93
SGCB-201ENST00000381431 MRE11P49959 708 aa20.84■□□□□ 0.93
SGCB-201ENST00000381431 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
SGCB-201ENST00000381431 HSP90AB4PQ58FF6 505 aa20.83■□□□□ 0.93
SGCB-201ENST00000381431 CAVIN1Q6NZI2 390 aaKnown RBP20.83■□□□□ 0.93
SGCB-201ENST00000381431 GCC1Q96CN9 775 aa20.83■□□□□ 0.93
SGCB-201ENST00000381431 APPP05067 770 aa20.83■□□□□ 0.92
SGCB-201ENST00000381431 TMPOP42166 694 aaKnown RBP20.83■□□□□ 0.92
SGCB-201ENST00000381431 RNF20Q5VTR2 975 aa20.83■□□□□ 0.92
SGCB-201ENST00000381431 CLASRPQ8N2M8 674 aaKnown RBP20.82■□□□□ 0.92
SGCB-201ENST00000381431 FAM43AQ8N2R8 423 aa20.82■□□□□ 0.92
SGCB-201ENST00000381431 NEUROD6Q96NK8 337 aa20.82■□□□□ 0.92
SGCB-201ENST00000381431 ERC2O15083 957 aa20.82■□□□□ 0.92
SGCB-201ENST00000381431 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
SGCB-201ENST00000381431 SLC26A8Q96RN1 970 aa20.81■□□□□ 0.92
SGCB-201ENST00000381431 NASPP49321 788 aaPredicted RBP20.81■□□□□ 0.92
SGCB-201ENST00000381431 CPLX1O14810 134 aa20.81■□□□□ 0.92
SGCB-201ENST00000381431 CLSTN1O94985 981 aa20.81■□□□□ 0.92
SGCB-201ENST00000381431 TMEM57Q8N5G2 664 aa20.81■□□□□ 0.92
SGCB-201ENST00000381431 SYTL4Q96C24 671 aaPredicted RBP20.81■□□□□ 0.92
SGCB-201ENST00000381431 CCDC30Q5VVM6 783 aa20.81■□□□□ 0.92
SGCB-201ENST00000381431 PLEKHH2Q8IVE3 1493 aa20.8■□□□□ 0.92
SGCB-201ENST00000381431 PTPRKQ15262 1439 aa20.8■□□□□ 0.92
SGCB-201ENST00000381431 MAP3K1Q13233 1512 aa20.8■□□□□ 0.92
SGCB-201ENST00000381431 FAM13BQ9NYF5 915 aa20.8■□□□□ 0.92
SGCB-201ENST00000381431 GAS2L2Q8NHY3 880 aa20.8■□□□□ 0.92
SGCB-201ENST00000381431 PTPN23Q9H3S7 1636 aa20.8■□□□□ 0.92
SGCB-201ENST00000381431 PRPF40AO75400 957 aaKnown RBP20.79■□□□□ 0.92
SGCB-201ENST00000381431 CHD1LQ86WJ1 897 aa20.79■□□□□ 0.92
SGCB-201ENST00000381431 FBXW7Q969H0 707 aa20.79■□□□□ 0.92
SGCB-201ENST00000381431 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
SGCB-201ENST00000381431 HDGFL1Q5TGJ6 251 aa20.78■□□□□ 0.92
SGCB-201ENST00000381431 ZNF592Q92610 1267 aa20.78■□□□□ 0.92
SGCB-201ENST00000381431 CAMSAP2Q08AD1 1489 aa20.78■□□□□ 0.92
SGCB-201ENST00000381431 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
SGCB-201ENST00000381431 RPRD2Q5VT52 1461 aaKnown RBP20.78■□□□□ 0.92
SGCB-201ENST00000381431 CCDC27Q2M243 656 aa20.78■□□□□ 0.92
SGCB-201ENST00000381431 SSH1Q8WYL5 1049 aa20.78■□□□□ 0.92
SGCB-201ENST00000381431 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms