RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 GJA5P36382 358 aa6.54□□□□□ -1.36
SMC6-202ENST00000381272 SLC19A1P41440 591 aa6.54□□□□□ -1.36
SMC6-202ENST00000381272 IRX2Q9BZI1 471 aaPredicted RBP6.54□□□□□ -1.36
SMC6-202ENST00000381272 PCDHGC3Q9UN70 934 aa6.54□□□□□ -1.36
SMC6-202ENST00000381272 C6orf229H3BNL8 230 aa6.53□□□□□ -1.36
SMC6-202ENST00000381272 SYMPKQ92797 1274 aaKnown RBP6.53□□□□□ -1.36
SMC6-202ENST00000381272 FCF1Q9Y324 198 aaKnown RBP6.53□□□□□ -1.36
SMC6-202ENST00000381272 MMP16P51512 607 aa6.53□□□□□ -1.36
SMC6-202ENST00000381272 RETREG3Q86VR2 466 aa6.53□□□□□ -1.36
SMC6-202ENST00000381272 RSBN1LQ6PCB5 846 aaPredicted RBP6.52□□□□□ -1.37
SMC6-202ENST00000381272 GPBP1L1Q9HC44 474 aaPredicted RBP6.52□□□□□ -1.37
SMC6-202ENST00000381272 SPDYE5A6NIY4 337 aa6.51□□□□□ -1.37
SMC6-202ENST00000381272 DXOO77932 396 aaKnown RBP6.51□□□□□ -1.37
SMC6-202ENST00000381272 TPRNQ4KMQ1 711 aa6.51□□□□□ -1.37
SMC6-202ENST00000381272 PLA2G2CQ5R387 149 aa6.51□□□□□ -1.37
SMC6-202ENST00000381272 LIAT1Q6ZQX7 453 aa6.51□□□□□ -1.37
SMC6-202ENST00000381272 RIC3Q7Z5B4 369 aa6.51□□□□□ -1.37
SMC6-202ENST00000381272 EMID1Q96A84 441 aaPredicted RBP6.51□□□□□ -1.37
SMC6-202ENST00000381272 RSPH6AQ9H0K4 717 aa6.51□□□□□ -1.37
SMC6-202ENST00000381272 KDM4CQ9H3R0 1056 aa6.51□□□□□ -1.37
SMC6-202ENST00000381272 SPTLC1O15269 473 aa6.5□□□□□ -1.37
SMC6-202ENST00000381272 MTMR2Q13614 643 aa6.5□□□□□ -1.37
SMC6-202ENST00000381272 SPRYD7Q5W111 196 aa6.5□□□□□ -1.37
SMC6-202ENST00000381272 MYSM1Q5VVJ2 828 aa6.5□□□□□ -1.37
SMC6-202ENST00000381272 ZBTB24O43167 697 aaPredicted RBP6.49□□□□□ -1.37
SMC6-202ENST00000381272 JUNDP17535 347 aa6.49□□□□□ -1.37
SMC6-202ENST00000381272 RPIAP49247 311 aa6.49□□□□□ -1.37
SMC6-202ENST00000381272 ZNF598Q86UK7 904 aaKnown RBP6.49□□□□□ -1.37
SMC6-202ENST00000381272 DDRGK1Q96HY6 314 aa6.49□□□□□ -1.37
SMC6-202ENST00000381272 SHROOM4Q9ULL8 1493 aa6.49□□□□□ -1.37
SMC6-202ENST00000381272 CD2BP2O95400 341 aaKnown RBP6.48□□□□□ -1.37
SMC6-202ENST00000381272 LAPTM4AQ15012 233 aa6.48□□□□□ -1.37
SMC6-202ENST00000381272 PCDHB15Q9Y5E8 787 aa6.48□□□□□ -1.37
SMC6-202ENST00000381272 GFRA3O60609 400 aa6.48□□□□□ -1.37
SMC6-202ENST00000381272 ZNF697Q5TEC3 545 aa6.48□□□□□ -1.37
SMC6-202ENST00000381272 PRPF38BQ5VTL8 546 aaKnown RBP6.48□□□□□ -1.37
SMC6-202ENST00000381272 CCDC24Q8N4L8 307 aa6.48□□□□□ -1.37
SMC6-202ENST00000381272 PRR7Q8TB68 274 aa6.48□□□□□ -1.37
SMC6-202ENST00000381272 ZBTB3Q9H5J0 574 aa6.48□□□□□ -1.37
SMC6-202ENST00000381272 FAM117AQ9C073 453 aa6.47□□□□□ -1.37
SMC6-202ENST00000381272 LIMD1Q9UGP4 676 aa6.47□□□□□ -1.37
SMC6-202ENST00000381272 PDZRN3Q9UPQ7 1066 aa6.47□□□□□ -1.37
SMC6-202ENST00000381272 HRCP23327 699 aa6.46□□□□□ -1.37
SMC6-202ENST00000381272 NEUROD2Q15784 382 aa6.46□□□□□ -1.37
SMC6-202ENST00000381272 CSPP1Q1MSJ5 1256 aa6.46□□□□□ -1.37
SMC6-202ENST00000381272 TUSC1Q2TAM9 212 aa6.46□□□□□ -1.37
SMC6-202ENST00000381272 DESI1Q6ICB0 168 aa6.46□□□□□ -1.37
SMC6-202ENST00000381272 CLK2P49760 499 aaKnown RBP6.46□□□□□ -1.38
SMC6-202ENST00000381272 NUDT12Q9BQG2 462 aa6.46□□□□□ -1.38
SMC6-202ENST00000381272 POLR3EQ9NVU0 708 aa6.46□□□□□ -1.38
SMC6-202ENST00000381272 NUTM2BA6NNL0 878 aaPredicted RBP6.45□□□□□ -1.38
SMC6-202ENST00000381272 NUTM2EB1AL46 878 aaPredicted RBP6.45□□□□□ -1.38
SMC6-202ENST00000381272 NRG2O14511 850 aaPredicted RBP6.45□□□□□ -1.38
SMC6-202ENST00000381272 NUTM2DQ5VT03 806 aaPredicted RBP6.45□□□□□ -1.38
SMC6-202ENST00000381272 NUTM2AQ8IVF1 878 aaPredicted RBP6.45□□□□□ -1.38
SMC6-202ENST00000381272 CCNYL3P0C7X3 344 aa6.44□□□□□ -1.38
SMC6-202ENST00000381272 PTPRNQ16849 979 aa6.44□□□□□ -1.38
SMC6-202ENST00000381272 TRIM67Q6ZTA4 783 aa6.44□□□□□ -1.38
SMC6-202ENST00000381272 CABLES1Q8TDN4 633 aa6.44□□□□□ -1.38
SMC6-202ENST00000381272 PRR20EP86478 221 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 PRR20CP86479 221 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 PRR20DP86480 221 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 PRR20BP86481 221 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 PRR20AP86496 221 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 TRIM32Q13049 653 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 SKIV2LQ15477 1246 aaKnown RBP6.43□□□□□ -1.38
SMC6-202ENST00000381272 QPCTQ16769 361 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 PLEKHG3A1L390 1219 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 CFAP99D6REC4 459 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 LILRB3O75022 631 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 SH3D19Q5HYK7 790 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 Q6ZNB5 142 aa6.43□□□□□ -1.38
SMC6-202ENST00000381272 BRPF1P55201 1214 aaPredicted RBP6.42□□□□□ -1.38
SMC6-202ENST00000381272 FOXC1Q12948 553 aa6.42□□□□□ -1.38
SMC6-202ENST00000381272 ATP1B4Q9UN42 357 aaPredicted RBP6.42□□□□□ -1.38
SMC6-202ENST00000381272 TNFRSF10AO00220 468 aa6.41□□□□□ -1.38
SMC6-202ENST00000381272 GDF9O60383 454 aa6.41□□□□□ -1.38
SMC6-202ENST00000381272 LYPD8Q6UX82 237 aa6.41□□□□□ -1.38
SMC6-202ENST00000381272 TSC1Q92574 1164 aa6.41□□□□□ -1.38
SMC6-202ENST00000381272 EVA1BQ9NVM1 165 aa6.41□□□□□ -1.38
SMC6-202ENST00000381272 PKD2L1Q9P0L9 805 aa6.41□□□□□ -1.38
SMC6-202ENST00000381272 RTL5Q5HYW3 569 aaPredicted RBP6.4□□□□□ -1.38
SMC6-202ENST00000381272 PTCRAQ6ISU1 281 aaPredicted RBP6.4□□□□□ -1.38
SMC6-202ENST00000381272 HELBQ8NG08 1087 aaPredicted RBP6.4□□□□□ -1.38
SMC6-202ENST00000381272 WNT7BP56706 349 aa6.39□□□□□ -1.39
SMC6-202ENST00000381272 KCNH2Q12809 1159 aa6.39□□□□□ -1.39
SMC6-202ENST00000381272 IL27Q8NEV9 243 aa6.39□□□□□ -1.39
SMC6-202ENST00000381272 WNT7AO00755 349 aa6.39□□□□□ -1.39
SMC6-202ENST00000381272 CTHP32929 405 aa6.39□□□□□ -1.39
SMC6-202ENST00000381272 PROCA1Q8NCQ7 364 aaPredicted RBP6.39□□□□□ -1.39
SMC6-202ENST00000381272 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMC6-202ENST00000381272 UNC93B1Q9H1C4 597 aa6.38□□□□□ -1.39
SMC6-202ENST00000381272 GOPCQ9HD26 462 aa6.38□□□□□ -1.39
SMC6-202ENST00000381272 CCDC180Q9P1Z9 1646 aa6.38□□□□□ -1.39
SMC6-202ENST00000381272 PER1O15534 1290 aaPredicted RBP6.37□□□□□ -1.39
SMC6-202ENST00000381272 PRKCSHP14314 528 aaPredicted RBP6.37□□□□□ -1.39
SMC6-202ENST00000381272 PKDCCQ504Y2 493 aa6.37□□□□□ -1.39
SMC6-202ENST00000381272 CYP4X1Q8N118 509 aa6.37□□□□□ -1.39
SMC6-202ENST00000381272 SKOR1P84550 965 aa6.36□□□□□ -1.39
SMC6-202ENST00000381272 RC3H1Q5TC82 1133 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms