RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 PATL2C9JE40 543 aaKnown RBP20.64■□□□□ 0.9
SNAPC3-202ENST00000380821 CCP110O43303 1012 aa20.64■□□□□ 0.9
SNAPC3-202ENST00000380821 CCDC66A2RUB6 948 aa20.64■□□□□ 0.89
SNAPC3-202ENST00000380821 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
SNAPC3-202ENST00000380821 PSMA5P28066 241 aa20.64■□□□□ 0.89
SNAPC3-202ENST00000380821 NOL10Q9BSC4 688 aaKnown RBP20.64■□□□□ 0.89
SNAPC3-202ENST00000380821 PANK1Q8TE04 598 aa20.64■□□□□ 0.89
SNAPC3-202ENST00000380821 NFXL1Q6ZNB6 911 aa20.63■□□□□ 0.89
SNAPC3-202ENST00000380821 ERICH2A1L162 156 aa20.63■□□□□ 0.89
SNAPC3-202ENST00000380821 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
SNAPC3-202ENST00000380821 MCM2P49736 904 aa20.63■□□□□ 0.89
SNAPC3-202ENST00000380821 SAFBQ15424 915 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNAPC3-202ENST00000380821 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNAPC3-202ENST00000380821 HMGN5P82970 282 aaKnown RBP20.62■□□□□ 0.89
SNAPC3-202ENST00000380821 MINK1Q8N4C8 1332 aaPredicted RBP20.6■□□□□ 0.89
SNAPC3-202ENST00000380821 RABEP1Q15276 862 aa20.6■□□□□ 0.89
SNAPC3-202ENST00000380821 CAVIN1Q6NZI2 390 aaKnown RBP20.6■□□□□ 0.89
SNAPC3-202ENST00000380821 SMARCA4P51532 1647 aa20.59■□□□□ 0.89
SNAPC3-202ENST00000380821 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
SNAPC3-202ENST00000380821 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
SNAPC3-202ENST00000380821 FBXW7Q969H0 707 aa20.59■□□□□ 0.89
SNAPC3-202ENST00000380821 NUTM2FA1L443 756 aa20.58■□□□□ 0.88
SNAPC3-202ENST00000380821 DHX8Q14562 1220 aaKnown RBP20.58■□□□□ 0.88
SNAPC3-202ENST00000380821 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
SNAPC3-202ENST00000380821 RRP12Q5JTH9 1297 aaKnown RBP20.57■□□□□ 0.88
SNAPC3-202ENST00000380821 KIF21BO75037 1637 aa20.56■□□□□ 0.88
SNAPC3-202ENST00000380821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.56■□□□□ 0.88
SNAPC3-202ENST00000380821 JPH4Q96JJ6 628 aa20.56■□□□□ 0.88
SNAPC3-202ENST00000380821 BRPF3Q9ULD4 1205 aa20.56■□□□□ 0.88
SNAPC3-202ENST00000380821 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
SNAPC3-202ENST00000380821 NAP1L1P55209 391 aaKnown RBP20.55■□□□□ 0.88
SNAPC3-202ENST00000380821 RNF214Q8ND24 703 aa20.55■□□□□ 0.88
SNAPC3-202ENST00000380821 CWC22Q9HCG8 908 aaKnown RBP20.55■□□□□ 0.88
SNAPC3-202ENST00000380821 TCEAL9Q9UHQ7 104 aa20.55■□□□□ 0.88
SNAPC3-202ENST00000380821 LRRC9Q6ZRR7 1453 aa20.55■□□□□ 0.88
SNAPC3-202ENST00000380821 TRIM5Q9C035 493 aa20.55■□□□□ 0.88
SNAPC3-202ENST00000380821 GCC1Q96CN9 775 aa20.55■□□□□ 0.88
SNAPC3-202ENST00000380821 BRMS1Q9HCU9 246 aa20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 DCTN1Q14203 1278 aa20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 PDZRN3Q9UPQ7 1066 aa20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 PDILTQ8N807 584 aa20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 NECTIN2Q92692 538 aa20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
SNAPC3-202ENST00000380821 FYCO1Q9BQS8 1478 aa20.53■□□□□ 0.88
SNAPC3-202ENST00000380821 FOSBP53539 338 aa20.53■□□□□ 0.88
SNAPC3-202ENST00000380821 CAGE1Q8TC20 777 aa20.53■□□□□ 0.88
SNAPC3-202ENST00000380821 PRPF40AO75400 957 aaKnown RBP20.53■□□□□ 0.88
SNAPC3-202ENST00000380821 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
SNAPC3-202ENST00000380821 ADAMTS8Q9UP79 889 aa20.53■□□□□ 0.88
SNAPC3-202ENST00000380821 HIP1O00291 1037 aa20.52■□□□□ 0.88
SNAPC3-202ENST00000380821 TRIM34Q9BYJ4 488 aa20.52■□□□□ 0.88
SNAPC3-202ENST00000380821 SDF4Q9BRK5 362 aa20.52■□□□□ 0.87
SNAPC3-202ENST00000380821 SMG6Q86US8 1419 aaKnown RBP20.52■□□□□ 0.87
SNAPC3-202ENST00000380821 PDCP20941 246 aa20.51■□□□□ 0.87
SNAPC3-202ENST00000380821 XBP1P17861 261 aa20.51■□□□□ 0.87
SNAPC3-202ENST00000380821 SMARCE1Q969G3 411 aa20.5■□□□□ 0.87
SNAPC3-202ENST00000380821 BACH2Q9BYV9 841 aa20.5■□□□□ 0.87
SNAPC3-202ENST00000380821 MYO6Q9UM54 1294 aa20.5■□□□□ 0.87
SNAPC3-202ENST00000380821 ZNF396Q96N95 335 aaPredicted RBP20.5■□□□□ 0.87
SNAPC3-202ENST00000380821 KINO60870 393 aaKnown RBP20.49■□□□□ 0.87
SNAPC3-202ENST00000380821 ATAD2BQ9ULI0 1458 aa20.49■□□□□ 0.87
SNAPC3-202ENST00000380821 SMC2O95347 1197 aa20.49■□□□□ 0.87
SNAPC3-202ENST00000380821 GNAI3P08754 354 aa20.49■□□□□ 0.87
SNAPC3-202ENST00000380821 GRPEL1Q9HAV7 217 aa20.48■□□□□ 0.87
SNAPC3-202ENST00000380821 DHX16O60231 1041 aaKnown RBP20.48■□□□□ 0.87
SNAPC3-202ENST00000380821 LEKR1Q6ZMV7 388 aa20.48■□□□□ 0.87
SNAPC3-202ENST00000380821 PTPRGP23470 1445 aa20.48■□□□□ 0.87
SNAPC3-202ENST00000380821 CCDC27Q2M243 656 aa20.47■□□□□ 0.87
SNAPC3-202ENST00000380821 RDXP35241 583 aaKnown RBP20.47■□□□□ 0.87
SNAPC3-202ENST00000380821 VPS37DQ86XT2 251 aa20.47■□□□□ 0.87
SNAPC3-202ENST00000380821 AEBP1Q8IUX7 1158 aa20.47■□□□□ 0.87
SNAPC3-202ENST00000380821 H0YHG0 523 aa20.47■□□□□ 0.87
SNAPC3-202ENST00000380821 PPP2R1AP30153 589 aa20.47■□□□□ 0.87
SNAPC3-202ENST00000380821 NEK4P51957 841 aa20.47■□□□□ 0.87
SNAPC3-202ENST00000380821 FILIP1LQ4L180 1135 aa20.46■□□□□ 0.87
SNAPC3-202ENST00000380821 WWC1Q8IX03 1113 aa20.46■□□□□ 0.87
SNAPC3-202ENST00000380821 CCDC191Q8NCU4 936 aa20.46■□□□□ 0.87
SNAPC3-202ENST00000380821 FSD1Q9BTV5 496 aa20.46■□□□□ 0.87
SNAPC3-202ENST00000380821 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
SNAPC3-202ENST00000380821 K7ELQ4 463 aaPredicted RBP20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 UBE2Q2Q8WVN8 375 aa20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 FANCD2Q9BXW9 1451 aa20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 HMOX1P09601 288 aa20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 CDCA7LQ96GN5 454 aa20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 CCDC192P0DO97 292 aa20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 IL27Q8NEV9 243 aa20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 CTDP1Q9Y5B0 961 aaPredicted RBP20.45■□□□□ 0.86
SNAPC3-202ENST00000380821 EPS15P42566 896 aa20.44■□□□□ 0.86
SNAPC3-202ENST00000380821 WASHC4Q2M389 1173 aa20.44■□□□□ 0.86
SNAPC3-202ENST00000380821 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
SNAPC3-202ENST00000380821 ANKRD50Q9ULJ7 1429 aa20.44■□□□□ 0.86
SNAPC3-202ENST00000380821 RIC3Q7Z5B4 369 aa20.44■□□□□ 0.86
SNAPC3-202ENST00000380821 CT47B1P0C2W7 299 aaPredicted RBP20.44■□□□□ 0.86
SNAPC3-202ENST00000380821 AKNAQ7Z591 1439 aa20.44■□□□□ 0.86
SNAPC3-202ENST00000380821 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
SNAPC3-202ENST00000380821 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
SNAPC3-202ENST00000380821 TCP11L2Q8N4U5 519 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms