RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 A2ML1A8K2U0 1454 aa30.74■■■□□ 2.51
VPS16-201ENST00000380443 ADAMTS8Q9UP79 889 aa30.73■■■□□ 2.51
VPS16-201ENST00000380443 TULP4Q9NRJ4 1543 aa30.73■■■□□ 2.51
VPS16-201ENST00000380443 ALKQ9UM73 1620 aa30.72■■■□□ 2.51
VPS16-201ENST00000380443 YTHDC2Q9H6S0 1430 aaKnown RBP30.72■■■□□ 2.51
VPS16-201ENST00000380443 TSHZ2Q9NRE2 1034 aa30.71■■■□□ 2.51
VPS16-201ENST00000380443 NSD3Q9BZ95 1437 aa30.71■■■□□ 2.51
VPS16-201ENST00000380443 NSD2O96028 1365 aa30.7■■■□□ 2.51
VPS16-201ENST00000380443 ANKRD36BQ8N2N9 1353 aa30.69■■■□□ 2.5
VPS16-201ENST00000380443 NGEFQ8N5V2 710 aa30.68■■■□□ 2.5
VPS16-201ENST00000380443 SLC12A5Q9H2X9 1139 aa30.68■■■□□ 2.5
VPS16-201ENST00000380443 POLR3AO14802 1390 aaPredicted RBP30.68■■■□□ 2.5
VPS16-201ENST00000380443 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.68■■■□□ 2.5
VPS16-201ENST00000380443 RIMS2Q9UQ26 1411 aa30.67■■■□□ 2.5
VPS16-201ENST00000380443 CGNL1Q0VF96 1302 aa30.66■■■□□ 2.5
VPS16-201ENST00000380443 NLRP1Q9C000 1473 aa30.66■■■□□ 2.5
VPS16-201ENST00000380443 DLC1Q96QB1 1528 aa30.66■■■□□ 2.5
VPS16-201ENST00000380443 ATAD2Q6PL18 1390 aa30.65■■■□□ 2.5
VPS16-201ENST00000380443 ZNF142P52746 1687 aaPredicted RBP30.64■■■□□ 2.49
VPS16-201ENST00000380443 HDGFP51858 240 aaKnown RBP30.63■■■□□ 2.49
VPS16-201ENST00000380443 CEP170BQ9Y4F5 1589 aaPredicted RBP30.63■■■□□ 2.49
VPS16-201ENST00000380443 MORC1Q86VD1 984 aa30.63■■■□□ 2.49
VPS16-201ENST00000380443 RCAN3Q9UKA8 241 aa30.62■■■□□ 2.49
VPS16-201ENST00000380443 HSPA2P54652 639 aa30.61■■■□□ 2.49
VPS16-201ENST00000380443 POGKQ9P215 609 aa30.6■■■□□ 2.49
VPS16-201ENST00000380443 STK26Q9P289 416 aa30.6■■■□□ 2.49
VPS16-201ENST00000380443 SALL2Q9Y467 1007 aaPredicted RBP30.58■■■□□ 2.49
VPS16-201ENST00000380443 PRAM1Q96QH2 718 aa30.57■■■□□ 2.48
VPS16-201ENST00000380443 SENP3-EIF4A1A0A087X0R7 540 aa30.56■■■□□ 2.48
VPS16-201ENST00000380443 RRP1P56182 461 aaKnown RBP30.56■■■□□ 2.48
VPS16-201ENST00000380443 CABP2Q9NPB3 220 aa30.55■■■□□ 2.48
VPS16-201ENST00000380443 ZNF521Q96K83 1311 aa30.55■■■□□ 2.48
VPS16-201ENST00000380443 ABCC11Q96J66 1382 aa30.54■■■□□ 2.48
VPS16-201ENST00000380443 SETD1AO15047 1707 aaKnown RBP30.54■■■□□ 2.48
VPS16-201ENST00000380443 SRPK2P78362 688 aaKnown RBP30.54■■■□□ 2.48
VPS16-201ENST00000380443 TERF2IPQ9NYB0 399 aa30.53■■■□□ 2.48
VPS16-201ENST00000380443 CDCA7LQ96GN5 454 aa30.52■■■□□ 2.48
VPS16-201ENST00000380443 THEMISQ8N1K5 641 aaPredicted RBP30.51■■■□□ 2.47
VPS16-201ENST00000380443 SIRT1Q96EB6 747 aa30.5■■■□□ 2.47
VPS16-201ENST00000380443 GOLGA2Q08379 1002 aa30.49■■■□□ 2.47
VPS16-201ENST00000380443 CFAP53Q96M91 514 aa30.49■■■□□ 2.47
VPS16-201ENST00000380443 PLEKHH1Q9ULM0 1364 aa30.49■■■□□ 2.47
VPS16-201ENST00000380443 MED14O60244 1454 aa30.48■■■□□ 2.47
VPS16-201ENST00000380443 SAFB2Q14151 953 aaKnown RBP eCLIP30.48■■■□□ 2.47
VPS16-201ENST00000380443 MINK1Q8N4C8 1332 aaPredicted RBP30.47■■■□□ 2.47
VPS16-201ENST00000380443 A0A1W2PP64 1363 aa30.45■■■□□ 2.47
VPS16-201ENST00000380443 B4GALNT3Q6L9W6 998 aa30.45■■■□□ 2.47
VPS16-201ENST00000380443 NRXN3Q9Y4C0 1643 aa30.44■■■□□ 2.46
VPS16-201ENST00000380443 CDK19Q9BWU1 502 aa30.43■■■□□ 2.46
VPS16-201ENST00000380443 UBR1Q8IWV7 1749 aa30.43■■■□□ 2.46
VPS16-201ENST00000380443 NCBP3Q53F19 620 aaKnown RBP30.43■■■□□ 2.46
VPS16-201ENST00000380443 HDGFL2Q7Z4V5 671 aaPredicted RBP30.43■■■□□ 2.46
VPS16-201ENST00000380443 FAM135BQ49AJ0 1406 aa30.41■■■□□ 2.46
VPS16-201ENST00000380443 KNDC1Q76NI1 1749 aa30.41■■■□□ 2.46
VPS16-201ENST00000380443 SHPRHQ149N8 1683 aa30.41■■■□□ 2.46
VPS16-201ENST00000380443 TECPR2O15040 1411 aa30.4■■■□□ 2.46
VPS16-201ENST00000380443 DUSP27Q5VZP5 1158 aa30.4■■■□□ 2.46
VPS16-201ENST00000380443 CCDC136Q96JN2 1154 aa30.4■■■□□ 2.46
VPS16-201ENST00000380443 DMRT2Q9Y5R5 561 aa30.4■■■□□ 2.46
VPS16-201ENST00000380443 TMEM2Q9UHN6 1383 aa30.4■■■□□ 2.46
VPS16-201ENST00000380443 SLFN5Q08AF3 891 aa30.4■■■□□ 2.46
VPS16-201ENST00000380443 TRMT2AQ8IZ69 625 aaKnown RBP30.4■■■□□ 2.46
VPS16-201ENST00000380443 ANKRD26Q9UPS8 1709 aa30.39■■■□□ 2.46
VPS16-201ENST00000380443 CD163L1Q9NR16 1453 aa30.39■■■□□ 2.46
VPS16-201ENST00000380443 APAF1O14727 1248 aa30.38■■■□□ 2.45
VPS16-201ENST00000380443 STRCQ7RTU9 1775 aa30.38■■■□□ 2.45
VPS16-201ENST00000380443 MTHFSP49914 203 aa30.38■■■□□ 2.45
VPS16-201ENST00000380443 ATP7BP35670 1465 aa30.37■■■□□ 2.45
VPS16-201ENST00000380443 ANKLE2Q86XL3 938 aa30.36■■■□□ 2.45
VPS16-201ENST00000380443 CCDC146Q8IYE0 955 aa30.36■■■□□ 2.45
VPS16-201ENST00000380443 RUNDC1Q96C34 613 aa30.36■■■□□ 2.45
VPS16-201ENST00000380443 E9PSI1 815 aa30.36■■■□□ 2.45
VPS16-201ENST00000380443 NCKAP5LQ9HCH0 1330 aa30.33■■■□□ 2.45
VPS16-201ENST00000380443 SENP3Q9H4L4 574 aaPredicted RBP30.33■■■□□ 2.45
VPS16-201ENST00000380443 TNNT2P45379 298 aaPredicted RBP30.32■■■□□ 2.44
VPS16-201ENST00000380443 METP08581 1390 aa30.32■■■□□ 2.44
VPS16-201ENST00000380443 SLIT1O75093 1534 aa30.31■■■□□ 2.44
VPS16-201ENST00000380443 CPS1P31327 1500 aa30.31■■■□□ 2.44
VPS16-201ENST00000380443 FYB1O15117 783 aa30.3■■■□□ 2.44
VPS16-201ENST00000380443 RBM19Q9Y4C8 960 aaKnown RBP30.3■■■□□ 2.44
VPS16-201ENST00000380443 EID1Q9Y6B2 187 aa30.3■■■□□ 2.44
VPS16-201ENST00000380443 WAPLQ7Z5K2 1190 aa30.29■■■□□ 2.44
VPS16-201ENST00000380443 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.29■■■□□ 2.44
VPS16-201ENST00000380443 CABP1Q9NZU7 370 aa30.29■■■□□ 2.44
VPS16-201ENST00000380443 PLEKHG1Q9ULL1 1385 aa30.29■■■□□ 2.44
VPS16-201ENST00000380443 ARHGAP23Q9P227 1491 aa30.29■■■□□ 2.44
VPS16-201ENST00000380443 WASLO00401 505 aaPredicted RBP30.29■■■□□ 2.44
VPS16-201ENST00000380443 NKTRP30414 1462 aaKnown RBP30.28■■■□□ 2.44
VPS16-201ENST00000380443 CCDC27Q2M243 656 aa30.27■■■□□ 2.44
VPS16-201ENST00000380443 KIF20BQ96Q89 1820 aa30.26■■■□□ 2.43
VPS16-201ENST00000380443 IQSEC2Q5JU85 1478 aa30.26■■■□□ 2.43
VPS16-201ENST00000380443 TXNDC2Q86VQ3 553 aa30.25■■■□□ 2.43
VPS16-201ENST00000380443 EXOC6Q8TAG9 804 aa30.25■■■□□ 2.43
VPS16-201ENST00000380443 WDR63Q8IWG1 891 aa30.23■■■□□ 2.43
VPS16-201ENST00000380443 WWC1Q8IX03 1113 aa30.23■■■□□ 2.43
VPS16-201ENST00000380443 PHF23Q9BUL5 403 aaPredicted RBP30.23■■■□□ 2.43
VPS16-201ENST00000380443 GGNBP2Q9H3C7 697 aa30.23■■■□□ 2.43
VPS16-201ENST00000380443 ADAMTS13Q76LX8 1427 aa30.22■■■□□ 2.43
VPS16-201ENST00000380443 CPSF1Q10570 1443 aaKnown RBP30.21■■■□□ 2.43
VPS16-201ENST00000380443 LTKP29376 864 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms