RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 DDX17Q92841 729 aaKnown RBP27.91■■■□□ 2.06
TMEM88B-201ENST00000378821 ORAI2Q96SN7 254 aa27.9■■■□□ 2.06
TMEM88B-201ENST00000378821 YTHDC2Q9H6S0 1430 aaKnown RBP27.9■■■□□ 2.06
TMEM88B-201ENST00000378821 SOS2Q07890 1332 aaPredicted RBP27.9■■■□□ 2.06
TMEM88B-201ENST00000378821 PNPLA6Q8IY17 1366 aa27.88■■■□□ 2.05
TMEM88B-201ENST00000378821 STK26Q9P289 416 aa27.88■■■□□ 2.05
TMEM88B-201ENST00000378821 WAPLQ7Z5K2 1190 aa27.87■■■□□ 2.05
TMEM88B-201ENST00000378821 PLEKHH1Q9ULM0 1364 aa27.85■■■□□ 2.05
TMEM88B-201ENST00000378821 MEX3CQ5U5Q3 659 aaKnown RBP27.84■■■□□ 2.05
TMEM88B-201ENST00000378821 ZNF772Q68DY9 489 aaPredicted RBP27.84■■■□□ 2.05
TMEM88B-201ENST00000378821 CFAP70Q5T0N1 1121 aa27.83■■■□□ 2.05
TMEM88B-201ENST00000378821 DHX57Q6P158 1386 aaKnown RBP27.81■■■□□ 2.04
TMEM88B-201ENST00000378821 NUTM2BA6NNL0 878 aaPredicted RBP27.8■■■□□ 2.04
TMEM88B-201ENST00000378821 NUTM2EB1AL46 878 aaPredicted RBP27.8■■■□□ 2.04
TMEM88B-201ENST00000378821 NUTM2AQ8IVF1 878 aaPredicted RBP27.8■■■□□ 2.04
TMEM88B-201ENST00000378821 FMN2Q9NZ56 1722 aa27.8■■■□□ 2.04
TMEM88B-201ENST00000378821 STAC3Q96MF2 364 aa27.79■■■□□ 2.04
TMEM88B-201ENST00000378821 COL22A1Q8NFW1 1626 aaPredicted RBP27.78■■■□□ 2.04
TMEM88B-201ENST00000378821 PXDNQ92626 1479 aa27.77■■■□□ 2.04
TMEM88B-201ENST00000378821 NPHP3Q7Z494 1330 aa27.77■■■□□ 2.04
TMEM88B-201ENST00000378821 ESCO1Q5FWF5 840 aa27.77■■■□□ 2.04
TMEM88B-201ENST00000378821 ADGRB1O14514 1584 aa27.77■■■□□ 2.04
TMEM88B-201ENST00000378821 DLC1Q96QB1 1528 aa27.77■■■□□ 2.04
TMEM88B-201ENST00000378821 AFF2P51816 1311 aa27.72■■■□□ 2.03
TMEM88B-201ENST00000378821 FOXO3O43524 673 aa27.7■■■□□ 2.02
TMEM88B-201ENST00000378821 KIF1AQ12756 1690 aa27.7■■■□□ 2.02
TMEM88B-201ENST00000378821 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.02
TMEM88B-201ENST00000378821 DCAF11Q8TEB1 546 aa27.69■■■□□ 2.02
TMEM88B-201ENST00000378821 PRAM1Q96QH2 718 aa27.68■■■□□ 2.02
TMEM88B-201ENST00000378821 RXRBP28702 533 aa27.67■■■□□ 2.02
TMEM88B-201ENST00000378821 RGPD8O14715 1765 aaPredicted RBP27.67■■■□□ 2.02
TMEM88B-201ENST00000378821 ADGRB2O60241 1585 aa27.66■■■□□ 2.02
TMEM88B-201ENST00000378821 NUTM2FA1L443 756 aa27.66■■■□□ 2.02
TMEM88B-201ENST00000378821 C8orf37Q96NL8 207 aa27.66■■■□□ 2.02
TMEM88B-201ENST00000378821 KDM2AQ9Y2K7 1162 aa27.65■■■□□ 2.02
TMEM88B-201ENST00000378821 ADAMTS2O95450 1211 aa27.62■■■□□ 2.01
TMEM88B-201ENST00000378821 FNBP4Q8N3X1 1017 aaPredicted RBP27.62■■■□□ 2.01
TMEM88B-201ENST00000378821 NGLY1Q96IV0 654 aa27.61■■■□□ 2.01
TMEM88B-201ENST00000378821 MARF1Q9Y4F3 1742 aaKnown RBP27.61■■■□□ 2.01
TMEM88B-201ENST00000378821 USP32Q8NFA0 1604 aa27.6■■■□□ 2.01
TMEM88B-201ENST00000378821 ANKARQ7Z5J8 1434 aa27.6■■■□□ 2.01
TMEM88B-201ENST00000378821 XPCQ01831 940 aaPredicted RBP27.6■■■□□ 2.01
TMEM88B-201ENST00000378821 QTRT2Q9H974 415 aaKnown RBP27.6■■■□□ 2.01
TMEM88B-201ENST00000378821 POGKQ9P215 609 aa27.6■■■□□ 2.01
TMEM88B-201ENST00000378821 SPATA31A3Q5VYP0 1347 aa27.6■■■□□ 2.01
TMEM88B-201ENST00000378821 PHF8Q9UPP1 1060 aa27.59■■■□□ 2.01
TMEM88B-201ENST00000378821 TRAK1Q9UPV9 953 aa27.59■■■□□ 2.01
TMEM88B-201ENST00000378821 TRIM26Q12899 539 aaPredicted RBP27.58■■■□□ 2.01
TMEM88B-201ENST00000378821 SAFB2Q14151 953 aaKnown RBP eCLIP27.58■■■□□ 2.01
TMEM88B-201ENST00000378821 RBM6P78332 1123 aaKnown RBP27.57■■■□□ 2
TMEM88B-201ENST00000378821 KRT28Q7Z3Y7 464 aa27.56■■■□□ 2
TMEM88B-201ENST00000378821 KIAA1210Q9ULL0 1709 aa27.55■■■□□ 2
TMEM88B-201ENST00000378821 ARHGEF28Q8N1W1 1705 aaKnown RBP27.53■■■□□ 2
TMEM88B-201ENST00000378821 SBNO1A3KN83 1393 aa27.53■■■□□ 2
TMEM88B-201ENST00000378821 USP21Q9UK80 565 aa27.53■■■□□ 2
TMEM88B-201ENST00000378821 BCL9LQ86UU0 1499 aa27.51■■■□□ 2
TMEM88B-201ENST00000378821 PSME1Q06323 249 aa27.51■■□□□ 1.99
TMEM88B-201ENST00000378821 RGS12O14924 1447 aa27.5■■□□□ 1.99
TMEM88B-201ENST00000378821 ATRNO75882 1429 aa27.5■■□□□ 1.99
TMEM88B-201ENST00000378821 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
TMEM88B-201ENST00000378821 EIF3AQ14152 1382 aaKnown RBP27.5■■□□□ 1.99
TMEM88B-201ENST00000378821 UPF1Q92900 1129 aaKnown RBP eCLIP27.5■■□□□ 1.99
TMEM88B-201ENST00000378821 TRPC5Q9UL62 973 aaPredicted RBP27.5■■□□□ 1.99
TMEM88B-201ENST00000378821 TULP4Q9NRJ4 1543 aa27.5■■□□□ 1.99
TMEM88B-201ENST00000378821 WASLO00401 505 aaPredicted RBP27.49■■□□□ 1.99
TMEM88B-201ENST00000378821 MINK1Q8N4C8 1332 aaPredicted RBP27.48■■□□□ 1.99
TMEM88B-201ENST00000378821 HIRIP3Q9BW71 556 aaPredicted RBP27.48■■□□□ 1.99
TMEM88B-201ENST00000378821 PRR36Q9H6K5 1346 aa27.47■■□□□ 1.99
TMEM88B-201ENST00000378821 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.46■■□□□ 1.99
TMEM88B-201ENST00000378821 TRPM3Q9HCF6 1732 aaPredicted RBP27.46■■□□□ 1.99
TMEM88B-201ENST00000378821 SLIT2O94813 1529 aa27.44■■□□□ 1.98
TMEM88B-201ENST00000378821 ARHGEF10O15013 1369 aa27.44■■□□□ 1.98
TMEM88B-201ENST00000378821 PMFBP1Q8TBY8 1022 aa27.43■■□□□ 1.98
TMEM88B-201ENST00000378821 ABCA3Q99758 1704 aa27.41■■□□□ 1.98
TMEM88B-201ENST00000378821 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
TMEM88B-201ENST00000378821 NBPF1Q3BBV0 1214 aa27.39■■□□□ 1.98
TMEM88B-201ENST00000378821 ITSN1Q15811 1721 aa27.38■■□□□ 1.97
TMEM88B-201ENST00000378821 ATP7BP35670 1465 aa27.38■■□□□ 1.97
TMEM88B-201ENST00000378821 UNC5CLQ8IV45 518 aa27.37■■□□□ 1.97
TMEM88B-201ENST00000378821 GPRASP1Q5JY77 1395 aa27.36■■□□□ 1.97
TMEM88B-201ENST00000378821 GJD4Q96KN9 370 aaPredicted RBP27.36■■□□□ 1.97
TMEM88B-201ENST00000378821 CABLES1Q8TDN4 633 aa27.35■■□□□ 1.97
TMEM88B-201ENST00000378821 NWD2Q9ULI1 1742 aa27.35■■□□□ 1.97
TMEM88B-201ENST00000378821 NUDT16Q96DE0 195 aaKnown RBP27.34■■□□□ 1.97
TMEM88B-201ENST00000378821 L3MBTL2Q969R5 705 aa27.33■■□□□ 1.97
TMEM88B-201ENST00000378821 TOPAZ1Q8N9V7 1692 aa27.33■■□□□ 1.97
TMEM88B-201ENST00000378821 CDK19Q9BWU1 502 aa27.32■■□□□ 1.96
TMEM88B-201ENST00000378821 PLCH1Q4KWH8 1693 aa27.31■■□□□ 1.96
TMEM88B-201ENST00000378821 GLI3P10071 1580 aa27.31■■□□□ 1.96
TMEM88B-201ENST00000378821 CRYBG1Q9Y4K1 1723 aa27.3■■□□□ 1.96
TMEM88B-201ENST00000378821 LMOD2Q6P5Q4 547 aa27.3■■□□□ 1.96
TMEM88B-201ENST00000378821 NGDNQ8NEJ9 315 aaKnown RBP27.3■■□□□ 1.96
TMEM88B-201ENST00000378821 SIN3AQ96ST3 1273 aa27.29■■□□□ 1.96
TMEM88B-201ENST00000378821 POLR3AO14802 1390 aaPredicted RBP27.29■■□□□ 1.96
TMEM88B-201ENST00000378821 ATAD2Q6PL18 1390 aa27.29■■□□□ 1.96
TMEM88B-201ENST00000378821 RALGAPBQ86X10 1494 aa27.29■■□□□ 1.96
TMEM88B-201ENST00000378821 HAP1P54257 671 aaPredicted RBP27.28■■□□□ 1.96
TMEM88B-201ENST00000378821 CCDC61Q9Y6R9 512 aa27.28■■□□□ 1.96
TMEM88B-201ENST00000378821 PLEKHG3A1L390 1219 aa27.27■■□□□ 1.96
TMEM88B-201ENST00000378821 FAM83GA6ND36 823 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms